Protein–RNA interactions for Protein: Q9D5Y1

Ccdc39, Coiled-coil domain-containing protein 39, mousemouse

Predictions only

Length 937 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc39Q9D5Y1 Gm22972-201ENSMUST00000083297 131 ntBASIC1.69□□□□□ -2.14
Ccdc39Q9D5Y1 Gm25188-201ENSMUST00000083913 122 ntBASIC1.69□□□□□ -2.14
Ccdc39Q9D5Y1 Gm24521-201ENSMUST00000083958 107 ntBASIC1.69□□□□□ -2.14
Ccdc39Q9D5Y1 Gpr174-202ENSMUST00000117310 3536 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
Ccdc39Q9D5Y1 Slco6c1-201ENSMUST00000027569 2747 ntAPPRIS P2 TSL 1 (best) BASIC1.68□□□□□ -2.14
Ccdc39Q9D5Y1 Gm24423-201ENSMUST00000101982 106 ntBASIC1.68□□□□□ -2.14
Ccdc39Q9D5Y1 Gm22784-201ENSMUST00000104088 132 ntBASIC1.68□□□□□ -2.14
Ccdc39Q9D5Y1 Gm12686-201ENSMUST00000120546 397 ntBASIC1.68□□□□□ -2.14
Ccdc39Q9D5Y1 Gm16225-201ENSMUST00000146152 276 ntTSL 5 BASIC1.68□□□□□ -2.14
Ccdc39Q9D5Y1 Gm22082-201ENSMUST00000157587 161 ntBASIC1.68□□□□□ -2.14
Ccdc39Q9D5Y1 Gm22963-201ENSMUST00000157960 91 ntBASIC1.68□□□□□ -2.14
Ccdc39Q9D5Y1 Gm25035-201ENSMUST00000175414 77 ntBASIC1.68□□□□□ -2.14
Ccdc39Q9D5Y1 Gm22621-201ENSMUST00000179678 74 ntBASIC1.68□□□□□ -2.14
Ccdc39Q9D5Y1 Gm29603-201ENSMUST00000186792 334 ntBASIC1.68□□□□□ -2.14
Ccdc39Q9D5Y1 Gm37089-201ENSMUST00000195616 129 ntBASIC1.68□□□□□ -2.14
Ccdc39Q9D5Y1 Mir465d-201ENSMUST00000196314 58 ntBASIC1.68□□□□□ -2.14
Ccdc39Q9D5Y1 Gm18546-201ENSMUST00000197245 676 ntBASIC1.68□□□□□ -2.14
Ccdc39Q9D5Y1 Gm44977-201ENSMUST00000205283 420 ntBASIC1.68□□□□□ -2.14
Ccdc39Q9D5Y1 Vmn2r-ps50-201ENSMUST00000209317 120 ntBASIC1.68□□□□□ -2.14
Ccdc39Q9D5Y1 Gm11351-202ENSMUST00000225724 478 ntBASIC1.68□□□□□ -2.14
Ccdc39Q9D5Y1 Gm26495-201ENSMUST00000083152 137 ntBASIC1.68□□□□□ -2.14
Ccdc39Q9D5Y1 Gm25943-201ENSMUST00000103791 90 ntBASIC1.67□□□□□ -2.14
Ccdc39Q9D5Y1 Mir466b-7-201ENSMUST00000103804 88 ntBASIC1.67□□□□□ -2.14
Ccdc39Q9D5Y1 Mir466b-5-201ENSMUST00000103900 88 ntBASIC1.67□□□□□ -2.14
Ccdc39Q9D5Y1 Gm22193-201ENSMUST00000116868 76 ntBASIC1.67□□□□□ -2.14
Ccdc39Q9D5Y1 Gm22221-201ENSMUST00000157362 103 ntBASIC1.67□□□□□ -2.14
Ccdc39Q9D5Y1 Gm20438-201ENSMUST00000174441 329 ntBASIC1.67□□□□□ -2.14
Ccdc39Q9D5Y1 Gm22118-201ENSMUST00000175593 171 ntBASIC1.67□□□□□ -2.14
Ccdc39Q9D5Y1 Mir466b-4-201ENSMUST00000178801 90 ntBASIC1.67□□□□□ -2.14
Ccdc39Q9D5Y1 Gm25285-201ENSMUST00000178951 90 ntBASIC1.67□□□□□ -2.14
Ccdc39Q9D5Y1 Gm22510-201ENSMUST00000179304 79 ntBASIC1.67□□□□□ -2.14
Ccdc39Q9D5Y1 Gm26336-201ENSMUST00000179449 79 ntBASIC1.67□□□□□ -2.14
Ccdc39Q9D5Y1 Gm26390-201ENSMUST00000179628 79 ntBASIC1.67□□□□□ -2.14
Ccdc39Q9D5Y1 Mir466b-6-201ENSMUST00000180061 90 ntBASIC1.67□□□□□ -2.14
Ccdc39Q9D5Y1 Mir466c-2-201ENSMUST00000180211 90 ntBASIC1.67□□□□□ -2.14
Ccdc39Q9D5Y1 Mir7683-201ENSMUST00000183842 61 ntBASIC1.67□□□□□ -2.14
Ccdc39Q9D5Y1 Gm28849-201ENSMUST00000188127 174 ntBASIC1.67□□□□□ -2.14
Ccdc39Q9D5Y1 Gm28330-201ENSMUST00000190353 171 ntBASIC1.67□□□□□ -2.14
Ccdc39Q9D5Y1 4930598N05Rik-207ENSMUST00000208997 83 ntTSL 5 BASIC1.67□□□□□ -2.14
Ccdc39Q9D5Y1 Gm24204-201ENSMUST00000082950 107 ntBASIC1.67□□□□□ -2.14
Ccdc39Q9D5Y1 Gm23100-201ENSMUST00000083455 141 ntBASIC1.67□□□□□ -2.14
Ccdc39Q9D5Y1 Mir340-201ENSMUST00000083483 98 ntBASIC1.67□□□□□ -2.14
Ccdc39Q9D5Y1 Vmn1r73-202ENSMUST00000226516 6155 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
Ccdc39Q9D5Y1 Gm25316-201ENSMUST00000116826 118 ntBASIC1.66□□□□□ -2.14
Ccdc39Q9D5Y1 Gm14846-201ENSMUST00000121868 216 ntBASIC1.66□□□□□ -2.14
Ccdc39Q9D5Y1 Gm22321-201ENSMUST00000157152 104 ntBASIC1.66□□□□□ -2.14
Ccdc39Q9D5Y1 Gm22551-201ENSMUST00000157795 103 ntBASIC1.66□□□□□ -2.14
Ccdc39Q9D5Y1 Gm23221-201ENSMUST00000158118 93 ntBASIC1.66□□□□□ -2.14
Ccdc39Q9D5Y1 Gm24392-201ENSMUST00000158136 103 ntBASIC1.66□□□□□ -2.14
Ccdc39Q9D5Y1 Mir1936-201ENSMUST00000158699 93 ntBASIC1.66□□□□□ -2.14
Ccdc39Q9D5Y1 Gm24667-201ENSMUST00000158938 103 ntBASIC1.66□□□□□ -2.14
Ccdc39Q9D5Y1 Gm23090-201ENSMUST00000177331 78 ntBASIC1.66□□□□□ -2.14
Ccdc39Q9D5Y1 Gm25615-201ENSMUST00000177836 94 ntBASIC1.66□□□□□ -2.14
Ccdc39Q9D5Y1 Gm25730-201ENSMUST00000178753 165 ntBASIC1.66□□□□□ -2.14
Ccdc39Q9D5Y1 Gm25024-201ENSMUST00000179667 104 ntBASIC1.66□□□□□ -2.14
Ccdc39Q9D5Y1 Gm25235-201ENSMUST00000179933 107 ntBASIC1.66□□□□□ -2.14
Ccdc39Q9D5Y1 Mir6540-201ENSMUST00000184886 108 ntBASIC1.66□□□□□ -2.14
Ccdc39Q9D5Y1 Ighv12-2-201ENSMUST00000191949 362 ntBASIC1.66□□□□□ -2.14
Ccdc39Q9D5Y1 1700016B01Rik-201ENSMUST00000197688 270 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
Ccdc39Q9D5Y1 Vmn1r-ps6-202ENSMUST00000202526 135 ntTSL 5 BASIC1.66□□□□□ -2.14
Ccdc39Q9D5Y1 Gm45543-201ENSMUST00000209327 88 ntBASIC1.66□□□□□ -2.14
Ccdc39Q9D5Y1 Gm16976-205ENSMUST00000227324 226 ntBASIC1.66□□□□□ -2.14
Ccdc39Q9D5Y1 Gm5899-201ENSMUST00000071770 270 ntBASIC1.66□□□□□ -2.14
Ccdc39Q9D5Y1 Olfr141-201ENSMUST00000216117 2935 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
Ccdc39Q9D5Y1 Olfr136-205ENSMUST00000216963 1821 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
Ccdc39Q9D5Y1 Mir223-201ENSMUST00000102112 110 ntBASIC1.65□□□□□ -2.15
Ccdc39Q9D5Y1 Mir374b-201ENSMUST00000102314 95 ntBASIC1.65□□□□□ -2.15
Ccdc39Q9D5Y1 Gm23013-201ENSMUST00000104146 106 ntBASIC1.65□□□□□ -2.15
Ccdc39Q9D5Y1 Gm24895-201ENSMUST00000122742 74 ntBASIC1.65□□□□□ -2.15
Ccdc39Q9D5Y1 Snord13-201ENSMUST00000157627 104 ntBASIC1.65□□□□□ -2.15
Ccdc39Q9D5Y1 Gm22433-201ENSMUST00000158550 142 ntBASIC1.65□□□□□ -2.15
Ccdc39Q9D5Y1 Gm23714-201ENSMUST00000179259 105 ntBASIC1.65□□□□□ -2.15
Ccdc39Q9D5Y1 Gm29022-201ENSMUST00000190702 225 ntBASIC1.65□□□□□ -2.15
Ccdc39Q9D5Y1 AL928567.1-201ENSMUST00000197891 138 ntBASIC1.65□□□□□ -2.15
Ccdc39Q9D5Y1 Olfr1002-202ENSMUST00000215548 2295 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
Ccdc39Q9D5Y1 Gm23258-201ENSMUST00000158319 106 ntBASIC1.64□□□□□ -2.15
Ccdc39Q9D5Y1 Gm22075-201ENSMUST00000158599 192 ntBASIC1.64□□□□□ -2.15
Ccdc39Q9D5Y1 Gm17113-201ENSMUST00000170118 171 ntBASIC1.64□□□□□ -2.15
Ccdc39Q9D5Y1 Gm24415-201ENSMUST00000180218 107 ntBASIC1.64□□□□□ -2.15
Ccdc39Q9D5Y1 Gm33051-201ENSMUST00000192940 274 ntTSL 5 BASIC1.64□□□□□ -2.15
Ccdc39Q9D5Y1 Gm3333-201ENSMUST00000221637 452 ntTSL 5 BASIC1.64□□□□□ -2.15
Ccdc39Q9D5Y1 Gm25789-201ENSMUST00000083294 76 ntBASIC1.64□□□□□ -2.15
Ccdc39Q9D5Y1 Gm25410-201ENSMUST00000083758 137 ntBASIC1.64□□□□□ -2.15
Ccdc39Q9D5Y1 AC124456.1-201ENSMUST00000217391 2597 ntBASIC1.63□□□□□ -2.15
Ccdc39Q9D5Y1 Gm25541-201ENSMUST00000116888 126 ntBASIC1.63□□□□□ -2.15
Ccdc39Q9D5Y1 Gm23841-201ENSMUST00000116951 114 ntBASIC1.63□□□□□ -2.15
Ccdc39Q9D5Y1 n-R5s87-201ENSMUST00000122752 116 ntBASIC1.63□□□□□ -2.15
Ccdc39Q9D5Y1 Gm25720-201ENSMUST00000157503 105 ntBASIC1.63□□□□□ -2.15
Ccdc39Q9D5Y1 Gm23536-201ENSMUST00000157541 134 ntBASIC1.63□□□□□ -2.15
Ccdc39Q9D5Y1 Gm27793-201ENSMUST00000183405 76 ntBASIC1.63□□□□□ -2.15
Ccdc39Q9D5Y1 Gm28992-201ENSMUST00000190534 139 ntBASIC1.63□□□□□ -2.15
Ccdc39Q9D5Y1 Gm38064-201ENSMUST00000194032 444 ntTSL 3 BASIC1.63□□□□□ -2.15
Ccdc39Q9D5Y1 Gm25820-201ENSMUST00000198589 127 ntBASIC1.63□□□□□ -2.15
Ccdc39Q9D5Y1 AC159896.1-201ENSMUST00000215264 215 ntBASIC1.63□□□□□ -2.15
Ccdc39Q9D5Y1 Gm24966-201ENSMUST00000082443 79 ntBASIC1.63□□□□□ -2.15
Ccdc39Q9D5Y1 Gm24164-201ENSMUST00000093663 104 ntBASIC1.63□□□□□ -2.15
Ccdc39Q9D5Y1 Ighv3-1-201ENSMUST00000103478 350 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
Ccdc39Q9D5Y1 Gm24283-201ENSMUST00000104233 107 ntBASIC1.62□□□□□ -2.15
Ccdc39Q9D5Y1 Gm12417-201ENSMUST00000119153 403 ntBASIC1.62□□□□□ -2.15
Ccdc39Q9D5Y1 Gm12815-201ENSMUST00000121737 135 ntBASIC1.62□□□□□ -2.15
Retrieved 100 of 76,532 protein–RNA pairs in 88.3 ms