Protein–RNA interactions for Protein: Q9D1C8

Vps28, Vacuolar protein sorting-associated protein 28 homolog, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps28Q9D1C8 Gm10722-201ENSMUST00000151376 651 ntAPPRIS P1 TSL 5 BASIC1.6□□□□□ -2.15
Vps28Q9D1C8 Gm23182-201ENSMUST00000158688 135 ntBASIC1.6□□□□□ -2.15
Vps28Q9D1C8 Gm24174-201ENSMUST00000158933 111 ntBASIC1.6□□□□□ -2.15
Vps28Q9D1C8 Gm20923-201ENSMUST00000190009 319 ntBASIC1.6□□□□□ -2.15
Vps28Q9D1C8 Gm21088-201ENSMUST00000190875 316 ntBASIC1.6□□□□□ -2.15
Vps28Q9D1C8 AC132615.1-201ENSMUST00000213873 255 ntBASIC1.6□□□□□ -2.15
Vps28Q9D1C8 Gm9795-201ENSMUST00000062156 693 ntBASIC1.6□□□□□ -2.15
Vps28Q9D1C8 Gm10222-201ENSMUST00000088336 294 ntBASIC1.6□□□□□ -2.15
Vps28Q9D1C8 Vmn1r75-207ENSMUST00000228646 4466 ntAPPRIS ALT2 BASIC1.6□□□□□ -2.15
Vps28Q9D1C8 Gm11904-201ENSMUST00000120562 248 ntBASIC1.59□□□□□ -2.15
Vps28Q9D1C8 Gm17196-201ENSMUST00000164074 345 ntTSL 5 BASIC1.59□□□□□ -2.15
Vps28Q9D1C8 Gm27265-201ENSMUST00000183559 77 ntBASIC1.59□□□□□ -2.15
Vps28Q9D1C8 Gm27898-201ENSMUST00000183987 80 ntBASIC1.59□□□□□ -2.15
Vps28Q9D1C8 Gm6105-201ENSMUST00000200580 624 ntBASIC1.59□□□□□ -2.15
Vps28Q9D1C8 Gm45365-201ENSMUST00000209489 256 ntBASIC1.59□□□□□ -2.15
Vps28Q9D1C8 AC157476.1-201ENSMUST00000215555 169 ntBASIC1.59□□□□□ -2.15
Vps28Q9D1C8 AC154245.1-201ENSMUST00000224615 601 ntBASIC1.59□□□□□ -2.15
Vps28Q9D1C8 Gm25038-201ENSMUST00000082928 130 ntBASIC1.59□□□□□ -2.15
Vps28Q9D1C8 Mir320-201ENSMUST00000083594 82 ntBASIC1.59□□□□□ -2.15
Vps28Q9D1C8 Vmn1r78-203ENSMUST00000228664 8100 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
Vps28Q9D1C8 Rpl30-ps5-201ENSMUST00000117104 361 ntBASIC1.58□□□□□ -2.16
Vps28Q9D1C8 Gm14882-201ENSMUST00000117216 218 ntBASIC1.58□□□□□ -2.16
Vps28Q9D1C8 Gm23718-201ENSMUST00000157350 307 ntBASIC1.58□□□□□ -2.16
Vps28Q9D1C8 Gm24076-201ENSMUST00000158179 94 ntBASIC1.58□□□□□ -2.16
Vps28Q9D1C8 Gm19572-201ENSMUST00000214326 338 ntBASIC1.58□□□□□ -2.16
Vps28Q9D1C8 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC1.58□□□□□ -2.16
Vps28Q9D1C8 Olfr921-202ENSMUST00000213958 4012 ntAPPRIS P1 TSL 2 BASIC1.57□□□□□ -2.16
Vps28Q9D1C8 Gm25832-201ENSMUST00000104140 130 ntBASIC1.57□□□□□ -2.16
Vps28Q9D1C8 Gm15404-201ENSMUST00000141811 364 ntTSL 2 BASIC1.57□□□□□ -2.16
Vps28Q9D1C8 Gm25825-201ENSMUST00000157091 124 ntBASIC1.57□□□□□ -2.16
Vps28Q9D1C8 Gm23579-201ENSMUST00000158528 103 ntBASIC1.57□□□□□ -2.16
Vps28Q9D1C8 Gm25831-201ENSMUST00000158924 163 ntBASIC1.57□□□□□ -2.16
Vps28Q9D1C8 Gm2962-201ENSMUST00000159266 336 ntBASIC1.57□□□□□ -2.16
Vps28Q9D1C8 Gm25615-201ENSMUST00000177836 94 ntBASIC1.57□□□□□ -2.16
Vps28Q9D1C8 Olfr277-ps1-201ENSMUST00000205749 285 ntBASIC1.57□□□□□ -2.16
Vps28Q9D1C8 Gm10217-201ENSMUST00000088080 135 ntAPPRIS P1 TSL 5 BASIC1.57□□□□□ -2.16
Vps28Q9D1C8 Gm6377-201ENSMUST00000060013 2793 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
Vps28Q9D1C8 Zfp788-207ENSMUST00000170770 2499 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
Vps28Q9D1C8 Gm18795-202ENSMUST00000223373 2920 ntBASIC1.56□□□□□ -2.16
Vps28Q9D1C8 Mir669l-201ENSMUST00000103771 98 ntBASIC1.56□□□□□ -2.16
Vps28Q9D1C8 n-R5s67-201ENSMUST00000104336 114 ntBASIC1.56□□□□□ -2.16
Vps28Q9D1C8 Gm23194-201ENSMUST00000158813 105 ntBASIC1.56□□□□□ -2.16
Vps28Q9D1C8 Gm21903-201ENSMUST00000178039 90 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
Vps28Q9D1C8 Gm7258-201ENSMUST00000179317 300 ntBASIC1.56□□□□□ -2.16
Vps28Q9D1C8 Ranbp2-ps5-201ENSMUST00000185141 379 ntBASIC1.56□□□□□ -2.16
Vps28Q9D1C8 Igkv15-102-201ENSMUST00000197885 287 ntBASIC1.56□□□□□ -2.16
Vps28Q9D1C8 AC125020.2-201ENSMUST00000218894 348 ntBASIC1.56□□□□□ -2.16
Vps28Q9D1C8 Gm24204-201ENSMUST00000082950 107 ntBASIC1.56□□□□□ -2.16
Vps28Q9D1C8 Gm12080-201ENSMUST00000119821 1883 ntBASIC1.56□□□□□ -2.16
Vps28Q9D1C8 AC164297.1-201ENSMUST00000224484 1561 ntBASIC1.55□□□□□ -2.16
Vps28Q9D1C8 Mir544-201ENSMUST00000103813 78 ntBASIC1.55□□□□□ -2.16
Vps28Q9D1C8 Gm25111-201ENSMUST00000116686 147 ntBASIC1.55□□□□□ -2.16
Vps28Q9D1C8 Gm15115-201ENSMUST00000121145 264 ntBASIC1.55□□□□□ -2.16
Vps28Q9D1C8 Gm17113-201ENSMUST00000170118 171 ntBASIC1.55□□□□□ -2.16
Vps28Q9D1C8 Mir7009-201ENSMUST00000184519 64 ntBASIC1.55□□□□□ -2.16
Vps28Q9D1C8 AC147560.1-201ENSMUST00000197528 107 ntBASIC1.55□□□□□ -2.16
Vps28Q9D1C8 Gm45027-201ENSMUST00000207081 78 ntTSL 3 BASIC1.55□□□□□ -2.16
Vps28Q9D1C8 AC101945.1-201ENSMUST00000226734 466 ntBASIC1.55□□□□□ -2.16
Vps28Q9D1C8 Gm21833-201ENSMUST00000177665 1500 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
Vps28Q9D1C8 Olfr935-202ENSMUST00000214157 1693 ntAPPRIS P1 TSL 3 BASIC1.55□□□□□ -2.16
Vps28Q9D1C8 Gm16032-201ENSMUST00000118534 168 ntBASIC1.54□□□□□ -2.16
Vps28Q9D1C8 Gm13560-201ENSMUST00000121865 329 ntBASIC1.54□□□□□ -2.16
Vps28Q9D1C8 Gm24595-201ENSMUST00000122501 110 ntBASIC1.54□□□□□ -2.16
Vps28Q9D1C8 Gm23101-201ENSMUST00000157550 137 ntBASIC1.54□□□□□ -2.16
Vps28Q9D1C8 Gm23558-201ENSMUST00000157823 80 ntBASIC1.54□□□□□ -2.16
Vps28Q9D1C8 Gm26402-201ENSMUST00000158499 113 ntBASIC1.54□□□□□ -2.16
Vps28Q9D1C8 Gm27905-201ENSMUST00000184005 207 ntBASIC1.54□□□□□ -2.16
Vps28Q9D1C8 Sprr2h-202ENSMUST00000191886 297 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
Vps28Q9D1C8 Gm44325-201ENSMUST00000196757 77 ntBASIC1.54□□□□□ -2.16
Vps28Q9D1C8 Gm44055-201ENSMUST00000204376 247 ntBASIC1.54□□□□□ -2.16
Vps28Q9D1C8 Sprr4-201ENSMUST00000062129 231 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
Vps28Q9D1C8 Gm24460-201ENSMUST00000082731 106 ntBASIC1.54□□□□□ -2.16
Vps28Q9D1C8 Gm26080-201ENSMUST00000104069 131 ntBASIC1.53□□□□□ -2.16
Vps28Q9D1C8 Gm12837-201ENSMUST00000120131 373 ntBASIC1.53□□□□□ -2.16
Vps28Q9D1C8 Gm24902-201ENSMUST00000158126 123 ntBASIC1.53□□□□□ -2.16
Vps28Q9D1C8 Gm25958-201ENSMUST00000175114 71 ntBASIC1.53□□□□□ -2.16
Vps28Q9D1C8 Gm27747-201ENSMUST00000184707 85 ntBASIC1.53□□□□□ -2.16
Vps28Q9D1C8 Trav15d-3-201ENSMUST00000198604 167 ntBASIC1.53□□□□□ -2.16
Vps28Q9D1C8 Gm44962-201ENSMUST00000206460 279 ntBASIC1.53□□□□□ -2.16
Vps28Q9D1C8 Gm44959-201ENSMUST00000209127 231 ntBASIC1.53□□□□□ -2.16
Vps28Q9D1C8 AC164612.2-202ENSMUST00000216314 253 ntBASIC1.53□□□□□ -2.16
Vps28Q9D1C8 Gm22421-201ENSMUST00000083058 107 ntBASIC1.53□□□□□ -2.16
Vps28Q9D1C8 Gm25759-201ENSMUST00000103988 129 ntBASIC1.52□□□□□ -2.17
Vps28Q9D1C8 Gm22097-201ENSMUST00000157929 278 ntBASIC1.52□□□□□ -2.17
Vps28Q9D1C8 Gm23581-201ENSMUST00000158531 63 ntBASIC1.52□□□□□ -2.17
Vps28Q9D1C8 Mir3471-1-201ENSMUST00000175139 131 ntBASIC1.52□□□□□ -2.17
Vps28Q9D1C8 Mir6540-201ENSMUST00000184886 108 ntBASIC1.52□□□□□ -2.17
Vps28Q9D1C8 Gm33866-201ENSMUST00000196911 289 ntBASIC1.52□□□□□ -2.17
Vps28Q9D1C8 Gm16976-205ENSMUST00000227324 226 ntBASIC1.52□□□□□ -2.17
Vps28Q9D1C8 Gm22571-201ENSMUST00000082984 70 ntBASIC1.52□□□□□ -2.17
Vps28Q9D1C8 Gm42862-201ENSMUST00000197494 2621 ntBASIC1.52□□□□□ -2.17
Vps28Q9D1C8 Gm42718-201ENSMUST00000197319 2681 ntBASIC1.51□□□□□ -2.17
Vps28Q9D1C8 AC153950.1-201ENSMUST00000219916 3238 ntBASIC1.51□□□□□ -2.17
Vps28Q9D1C8 Gm22545-201ENSMUST00000104350 132 ntBASIC1.51□□□□□ -2.17
Vps28Q9D1C8 Gm11322-201ENSMUST00000118095 435 ntBASIC1.51□□□□□ -2.17
Vps28Q9D1C8 Rhox11-ps3-201ENSMUST00000121166 233 ntBASIC1.51□□□□□ -2.17
Vps28Q9D1C8 n-R5s188-201ENSMUST00000122646 105 ntBASIC1.51□□□□□ -2.17
Vps28Q9D1C8 Gm23221-201ENSMUST00000158118 93 ntBASIC1.51□□□□□ -2.17
Vps28Q9D1C8 Gm26038-201ENSMUST00000158151 106 ntBASIC1.51□□□□□ -2.17
Vps28Q9D1C8 Gm22164-201ENSMUST00000158413 106 ntBASIC1.51□□□□□ -2.17
Retrieved 100 of 76,532 protein–RNA pairs in 113.2 ms