Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Gm16405-201ENSMUST00000169247 468 ntAPPRIS P1 TSL 3 BASIC1.42□□□□□ -2.18
Smc1aQ9CU62 Gm7958-201ENSMUST00000178255 468 ntBASIC1.42□□□□□ -2.18
Smc1aQ9CU62 Gm7950-201ENSMUST00000179633 468 ntBASIC1.42□□□□□ -2.18
Smc1aQ9CU62 Gm26914-201ENSMUST00000182262 223 ntBASIC1.42□□□□□ -2.18
Smc1aQ9CU62 Mir6951-201ENSMUST00000183910 75 ntBASIC1.42□□□□□ -2.18
Smc1aQ9CU62 Gm34139-201ENSMUST00000196166 294 ntBASIC1.42□□□□□ -2.18
Smc1aQ9CU62 Vmn1r-ps6-202ENSMUST00000202526 135 ntTSL 5 BASIC1.42□□□□□ -2.18
Smc1aQ9CU62 4930598N05Rik-207ENSMUST00000208997 83 ntTSL 5 BASIC1.42□□□□□ -2.18
Smc1aQ9CU62 mt-Nd4-201ENSMUST00000082414 1378 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
Smc1aQ9CU62 Mir669d-2-201ENSMUST00000116854 86 ntBASIC1.41□□□□□ -2.18
Smc1aQ9CU62 Gm14761-201ENSMUST00000121363 262 ntBASIC1.41□□□□□ -2.18
Smc1aQ9CU62 Gm24277-201ENSMUST00000158661 104 ntBASIC1.41□□□□□ -2.18
Smc1aQ9CU62 Gm22944-201ENSMUST00000158662 133 ntBASIC1.41□□□□□ -2.18
Smc1aQ9CU62 Gm23636-201ENSMUST00000175070 95 ntBASIC1.41□□□□□ -2.18
Smc1aQ9CU62 Gm16399-201ENSMUST00000181423 219 ntBASIC1.41□□□□□ -2.18
Smc1aQ9CU62 Gm37089-201ENSMUST00000195616 129 ntBASIC1.41□□□□□ -2.18
Smc1aQ9CU62 AC125167.1-201ENSMUST00000198698 141 ntBASIC1.41□□□□□ -2.18
Smc1aQ9CU62 Gm24316-201ENSMUST00000083041 107 ntBASIC1.41□□□□□ -2.18
Smc1aQ9CU62 Gm22003-201ENSMUST00000101885 107 ntBASIC1.4□□□□□ -2.19
Smc1aQ9CU62 Trgj3-201ENSMUST00000103562 60 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
Smc1aQ9CU62 Gm24724-201ENSMUST00000158230 107 ntBASIC1.4□□□□□ -2.19
Smc1aQ9CU62 Gm24501-201ENSMUST00000158452 62 ntBASIC1.4□□□□□ -2.19
Smc1aQ9CU62 Gm22434-201ENSMUST00000158549 122 ntBASIC1.4□□□□□ -2.19
Smc1aQ9CU62 Gm22129-201ENSMUST00000179034 107 ntBASIC1.4□□□□□ -2.19
Smc1aQ9CU62 Gm23410-201ENSMUST00000179967 107 ntBASIC1.4□□□□□ -2.19
Smc1aQ9CU62 Gm22756-201ENSMUST00000180118 107 ntBASIC1.4□□□□□ -2.19
Smc1aQ9CU62 Gm27997-201ENSMUST00000184942 69 ntBASIC1.4□□□□□ -2.19
Smc1aQ9CU62 Gm28661-201ENSMUST00000188231 681 ntBASIC1.4□□□□□ -2.19
Smc1aQ9CU62 Gm29665-201ENSMUST00000191457 528 ntBASIC1.4□□□□□ -2.19
Smc1aQ9CU62 Mir3535-201ENSMUST00000197651 147 ntBASIC1.4□□□□□ -2.19
Smc1aQ9CU62 Gm29865-201ENSMUST00000197726 451 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
Smc1aQ9CU62 Olfr1064-ps1-201ENSMUST00000213670 600 ntBASIC1.4□□□□□ -2.19
Smc1aQ9CU62 AC163295.1-201ENSMUST00000227840 314 ntBASIC1.4□□□□□ -2.19
Smc1aQ9CU62 Gm22306-201ENSMUST00000082692 107 ntBASIC1.4□□□□□ -2.19
Smc1aQ9CU62 Gm22505-201ENSMUST00000082956 108 ntBASIC1.4□□□□□ -2.19
Smc1aQ9CU62 Gm22363-201ENSMUST00000083100 108 ntBASIC1.4□□□□□ -2.19
Smc1aQ9CU62 Gm23814-201ENSMUST00000083230 102 ntBASIC1.4□□□□□ -2.19
Smc1aQ9CU62 Gm23095-201ENSMUST00000083446 107 ntBASIC1.4□□□□□ -2.19
Smc1aQ9CU62 Gm24252-201ENSMUST00000083700 132 ntBASIC1.4□□□□□ -2.19
Smc1aQ9CU62 Gm24164-201ENSMUST00000093663 104 ntBASIC1.4□□□□□ -2.19
Smc1aQ9CU62 8030445P17Rik-201ENSMUST00000192614 2741 ntBASIC1.4□□□□□ -2.19
Smc1aQ9CU62 Gm42718-201ENSMUST00000197319 2681 ntBASIC1.4□□□□□ -2.19
Smc1aQ9CU62 Gm12924-201ENSMUST00000121747 318 ntBASIC1.39□□□□□ -2.19
Smc1aQ9CU62 Gm15391-201ENSMUST00000147509 257 ntTSL 3 BASIC1.39□□□□□ -2.19
Smc1aQ9CU62 Gm22074-201ENSMUST00000158595 113 ntBASIC1.39□□□□□ -2.19
Smc1aQ9CU62 Gm26029-201ENSMUST00000158659 132 ntBASIC1.39□□□□□ -2.19
Smc1aQ9CU62 Mir1954-201ENSMUST00000175595 86 ntBASIC1.39□□□□□ -2.19
Smc1aQ9CU62 Gm28579-201ENSMUST00000186143 369 ntBASIC1.39□□□□□ -2.19
Smc1aQ9CU62 Gm45673-201ENSMUST00000210293 358 ntBASIC1.39□□□□□ -2.19
Smc1aQ9CU62 Olfr1070-ps1-201ENSMUST00000215939 388 ntBASIC1.39□□□□□ -2.19
Smc1aQ9CU62 Defb50-201ENSMUST00000078879 373 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
Smc1aQ9CU62 Gm25793-201ENSMUST00000083287 107 ntBASIC1.39□□□□□ -2.19
Smc1aQ9CU62 Gm23845-201ENSMUST00000083834 152 ntBASIC1.39□□□□□ -2.19
Smc1aQ9CU62 Mir1967-201ENSMUST00000157789 82 ntBASIC1.38□□□□□ -2.19
Smc1aQ9CU62 Mir448-201ENSMUST00000083516 112 ntBASIC1.38□□□□□ -2.19
Smc1aQ9CU62 Rps24-ps2-201ENSMUST00000091375 395 ntBASIC1.38□□□□□ -2.19
Smc1aQ9CU62 Gm24283-201ENSMUST00000104233 107 ntBASIC1.37□□□□□ -2.19
Smc1aQ9CU62 Gm22883-201ENSMUST00000157376 106 ntBASIC1.37□□□□□ -2.19
Smc1aQ9CU62 Gm22485-201ENSMUST00000157990 109 ntBASIC1.37□□□□□ -2.19
Smc1aQ9CU62 Gm27656-201ENSMUST00000185055 80 ntBASIC1.37□□□□□ -2.19
Smc1aQ9CU62 Gm37763-201ENSMUST00000193445 120 ntBASIC1.37□□□□□ -2.19
Smc1aQ9CU62 Gm38074-201ENSMUST00000193467 145 ntTSL 5 BASIC1.37□□□□□ -2.19
Smc1aQ9CU62 Gm19855-201ENSMUST00000210145 249 ntBASIC1.37□□□□□ -2.19
Smc1aQ9CU62 Olfr1108-ps1-201ENSMUST00000216930 121 ntBASIC1.37□□□□□ -2.19
Smc1aQ9CU62 Gm29818-201ENSMUST00000218070 165 ntBASIC1.37□□□□□ -2.19
Smc1aQ9CU62 Gm31447-201ENSMUST00000222345 384 ntTSL 3 BASIC1.37□□□□□ -2.19
Smc1aQ9CU62 Olfr921-202ENSMUST00000213958 4012 ntAPPRIS P1 TSL 2 BASIC1.37□□□□□ -2.19
Smc1aQ9CU62 Gm23987-201ENSMUST00000117039 129 ntBASIC1.36□□□□□ -2.19
Smc1aQ9CU62 Gm14923-201ENSMUST00000118270 155 ntBASIC1.36□□□□□ -2.19
Smc1aQ9CU62 Gm13967-201ENSMUST00000120404 380 ntBASIC1.36□□□□□ -2.19
Smc1aQ9CU62 Gm22242-201ENSMUST00000175224 118 ntBASIC1.36□□□□□ -2.19
Smc1aQ9CU62 Gm28016-201ENSMUST00000184594 196 ntBASIC1.36□□□□□ -2.19
Smc1aQ9CU62 Gm42774-201ENSMUST00000198854 283 ntBASIC1.36□□□□□ -2.19
Smc1aQ9CU62 Vmn1r-ps13-201ENSMUST00000204697 134 ntBASIC1.36□□□□□ -2.19
Smc1aQ9CU62 AC122242.1-201ENSMUST00000224650 304 ntBASIC1.36□□□□□ -2.19
Smc1aQ9CU62 Gm23406-201ENSMUST00000082537 122 ntBASIC1.36□□□□□ -2.19
Smc1aQ9CU62 Gm23941-201ENSMUST00000101953 107 ntBASIC1.35□□□□□ -2.19
Smc1aQ9CU62 Gm12449-201ENSMUST00000117572 234 ntBASIC1.35□□□□□ -2.19
Smc1aQ9CU62 Gm11794-201ENSMUST00000119446 237 ntBASIC1.35□□□□□ -2.19
Smc1aQ9CU62 Gm13725-201ENSMUST00000122139 207 ntBASIC1.35□□□□□ -2.19
Smc1aQ9CU62 Gm22479-201ENSMUST00000122566 81 ntBASIC1.35□□□□□ -2.19
Smc1aQ9CU62 Gm25069-201ENSMUST00000175238 86 ntBASIC1.35□□□□□ -2.19
Smc1aQ9CU62 Gm21060-201ENSMUST00000179346 168 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
Smc1aQ9CU62 Mir7063-201ENSMUST00000184158 91 ntBASIC1.35□□□□□ -2.19
Smc1aQ9CU62 Gm37801-201ENSMUST00000194754 274 ntBASIC1.35□□□□□ -2.19
Smc1aQ9CU62 Mir7227-201ENSMUST00000200408 59 ntBASIC1.35□□□□□ -2.19
Smc1aQ9CU62 Gm45005-201ENSMUST00000206640 157 ntBASIC1.35□□□□□ -2.19
Smc1aQ9CU62 Gm24966-201ENSMUST00000082443 79 ntBASIC1.35□□□□□ -2.19
Smc1aQ9CU62 Snord1a-201ENSMUST00000083160 74 ntBASIC1.35□□□□□ -2.19
Smc1aQ9CU62 Gm18795-202ENSMUST00000223373 2920 ntBASIC1.35□□□□□ -2.19
Smc1aQ9CU62 Gm26363-201ENSMUST00000158866 83 ntBASIC1.34□□□□□ -2.19
Smc1aQ9CU62 Olfr1366-201ENSMUST00000168629 1054 ntAPPRIS ALT2 BASIC1.34□□□□□ -2.19
Smc1aQ9CU62 Tmem167-ps2-201ENSMUST00000190251 214 ntBASIC1.34□□□□□ -2.19
Smc1aQ9CU62 Mir465d-201ENSMUST00000196314 58 ntBASIC1.34□□□□□ -2.19
Smc1aQ9CU62 Gm45616-201ENSMUST00000211711 319 ntBASIC1.34□□□□□ -2.19
Smc1aQ9CU62 CT009696.1-201ENSMUST00000215745 256 ntBASIC1.34□□□□□ -2.19
Smc1aQ9CU62 Olfr1366-204ENSMUST00000218154 1054 ntAPPRIS P2 BASIC1.34□□□□□ -2.19
Smc1aQ9CU62 AC115735.2-201ENSMUST00000227135 351 ntBASIC1.34□□□□□ -2.19
Smc1aQ9CU62 Gm23055-201ENSMUST00000082805 94 ntBASIC1.34□□□□□ -2.19
Smc1aQ9CU62 Mir196b-201ENSMUST00000083509 85 ntBASIC1.34□□□□□ -2.19
Retrieved 100 of 76,532 protein–RNA pairs in 143.2 ms