Protein–RNA interactions for Protein: Q9CR29

Ccdc43, Coiled-coil domain-containing protein 43, mousemouse

Known RBP Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc43Q9CR29 Gm44687-201ENSMUST00000204975 235 ntBASIC1.16□□□□□ -2.22
Ccdc43Q9CR29 Gm25204-201ENSMUST00000082843 106 ntBASIC1.16□□□□□ -2.22
Ccdc43Q9CR29 Gm14914-201ENSMUST00000117576 2031 ntBASIC1.15□□□□□ -2.22
Ccdc43Q9CR29 Gm43877-201ENSMUST00000205029 2238 ntBASIC1.15□□□□□ -2.23
Ccdc43Q9CR29 Gm16032-201ENSMUST00000118534 168 ntBASIC1.15□□□□□ -2.23
Ccdc43Q9CR29 Gm12647-201ENSMUST00000118977 265 ntBASIC1.15□□□□□ -2.23
Ccdc43Q9CR29 Gm25825-201ENSMUST00000157091 124 ntBASIC1.15□□□□□ -2.23
Ccdc43Q9CR29 Gm26194-201ENSMUST00000175036 71 ntBASIC1.15□□□□□ -2.23
Ccdc43Q9CR29 Mir8119-201ENSMUST00000183371 129 ntBASIC1.15□□□□□ -2.23
Ccdc43Q9CR29 Mir7009-201ENSMUST00000184519 64 ntBASIC1.15□□□□□ -2.23
Ccdc43Q9CR29 Gm27545-201ENSMUST00000184755 202 ntBASIC1.15□□□□□ -2.23
Ccdc43Q9CR29 Gm7654-201ENSMUST00000186738 683 ntBASIC1.15□□□□□ -2.23
Ccdc43Q9CR29 Ighv1-23-201ENSMUST00000194625 351 ntAPPRIS P1 BASIC1.15□□□□□ -2.23
Ccdc43Q9CR29 AC164297.5-201ENSMUST00000224365 198 ntBASIC1.15□□□□□ -2.23
Ccdc43Q9CR29 AC163646.2-201ENSMUST00000227962 141 ntBASIC1.15□□□□□ -2.23
Ccdc43Q9CR29 Gm23242-201ENSMUST00000083055 107 ntBASIC1.15□□□□□ -2.23
Ccdc43Q9CR29 Gm24252-201ENSMUST00000083700 132 ntBASIC1.15□□□□□ -2.23
Ccdc43Q9CR29 Gm24523-201ENSMUST00000083965 132 ntBASIC1.15□□□□□ -2.23
Ccdc43Q9CR29 Gm26107-201ENSMUST00000083972 107 ntBASIC1.15□□□□□ -2.23
Ccdc43Q9CR29 Zfp981-203ENSMUST00000179175 2953 ntAPPRIS P1 TSL 2 BASIC1.15□□□□□ -2.23
Ccdc43Q9CR29 Traj45-201ENSMUST00000103697 63 ntAPPRIS P1 BASIC1.14□□□□□ -2.23
Ccdc43Q9CR29 Mir1951-201ENSMUST00000157981 89 ntBASIC1.14□□□□□ -2.23
Ccdc43Q9CR29 Gm24847-201ENSMUST00000158032 108 ntBASIC1.14□□□□□ -2.23
Ccdc43Q9CR29 Gm23114-201ENSMUST00000158478 117 ntBASIC1.14□□□□□ -2.23
Ccdc43Q9CR29 Gm26022-201ENSMUST00000158663 108 ntBASIC1.14□□□□□ -2.23
Ccdc43Q9CR29 Ranbp2-ps2-201ENSMUST00000184379 370 ntBASIC1.14□□□□□ -2.23
Ccdc43Q9CR29 Gm45268-201ENSMUST00000210046 370 ntBASIC1.14□□□□□ -2.23
Ccdc43Q9CR29 AC109212.1-201ENSMUST00000215561 427 ntBASIC1.14□□□□□ -2.23
Ccdc43Q9CR29 Gm40604-202ENSMUST00000219541 522 ntTSL 5 BASIC1.14□□□□□ -2.23
Ccdc43Q9CR29 AC098718.2-201ENSMUST00000226822 285 ntBASIC1.14□□□□□ -2.23
Ccdc43Q9CR29 AC168062.3-201ENSMUST00000227025 165 ntBASIC1.14□□□□□ -2.23
Ccdc43Q9CR29 CT010505.1-201ENSMUST00000227026 396 ntBASIC1.14□□□□□ -2.23
Ccdc43Q9CR29 Gm25851-201ENSMUST00000082794 107 ntBASIC1.14□□□□□ -2.23
Ccdc43Q9CR29 Gm24042-201ENSMUST00000083114 103 ntBASIC1.14□□□□□ -2.23
Ccdc43Q9CR29 Gm25627-201ENSMUST00000084003 153 ntBASIC1.14□□□□□ -2.23
Ccdc43Q9CR29 Mir490-201ENSMUST00000093567 84 ntBASIC1.14□□□□□ -2.23
Ccdc43Q9CR29 Olfr832-202ENSMUST00000218385 4435 ntAPPRIS P1 TSL 5 BASIC1.14□□□□□ -2.23
Ccdc43Q9CR29 n-R5s67-201ENSMUST00000104336 114 ntBASIC1.13□□□□□ -2.23
Ccdc43Q9CR29 Gm23492-201ENSMUST00000116837 115 ntBASIC1.13□□□□□ -2.23
Ccdc43Q9CR29 Gm15030-201ENSMUST00000119804 484 ntBASIC1.13□□□□□ -2.23
Ccdc43Q9CR29 Gm27640-201ENSMUST00000184580 147 ntBASIC1.13□□□□□ -2.23
Ccdc43Q9CR29 Gm28344-201ENSMUST00000185704 279 ntBASIC1.13□□□□□ -2.23
Ccdc43Q9CR29 AC116589.4-201ENSMUST00000222390 216 ntBASIC1.13□□□□□ -2.23
Ccdc43Q9CR29 Mir22-201ENSMUST00000083595 95 ntBASIC1.13□□□□□ -2.23
Ccdc43Q9CR29 n-R5s63-201ENSMUST00000122756 103 ntBASIC1.12□□□□□ -2.23
Ccdc43Q9CR29 Gm24777-201ENSMUST00000157644 107 ntBASIC1.12□□□□□ -2.23
Ccdc43Q9CR29 Gm23898-201ENSMUST00000158111 103 ntBASIC1.12□□□□□ -2.23
Ccdc43Q9CR29 Gm25768-201ENSMUST00000158570 98 ntBASIC1.12□□□□□ -2.23
Ccdc43Q9CR29 Gm22114-201ENSMUST00000177756 107 ntBASIC1.12□□□□□ -2.23
Ccdc43Q9CR29 Mir7665-201ENSMUST00000184907 63 ntBASIC1.12□□□□□ -2.23
Ccdc43Q9CR29 Gm20118-201ENSMUST00000187207 162 ntBASIC1.12□□□□□ -2.23
Ccdc43Q9CR29 Gm28862-201ENSMUST00000188246 163 ntBASIC1.12□□□□□ -2.23
Ccdc43Q9CR29 Mir465d-201ENSMUST00000196314 58 ntBASIC1.12□□□□□ -2.23
Ccdc43Q9CR29 Olfr1421-ps1-201ENSMUST00000208900 208 ntBASIC1.12□□□□□ -2.23
Ccdc43Q9CR29 Gm31447-201ENSMUST00000222345 384 ntTSL 3 BASIC1.12□□□□□ -2.23
Ccdc43Q9CR29 Gm23412-201ENSMUST00000083017 107 ntBASIC1.12□□□□□ -2.23
Ccdc43Q9CR29 Gm21876-201ENSMUST00000096511 282 ntAPPRIS P1 TSL 5 BASIC1.12□□□□□ -2.23
Ccdc43Q9CR29 Gm43960-201ENSMUST00000204249 5020 ntBASIC1.12□□□□□ -2.23
Ccdc43Q9CR29 Gm15327-202ENSMUST00000153958 467 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
Ccdc43Q9CR29 Gm25011-201ENSMUST00000158398 126 ntBASIC1.11□□□□□ -2.23
Ccdc43Q9CR29 Gm24020-201ENSMUST00000180156 108 ntBASIC1.11□□□□□ -2.23
Ccdc43Q9CR29 Gm28921-201ENSMUST00000190219 378 ntBASIC1.11□□□□□ -2.23
Ccdc43Q9CR29 Sprr2c-ps-201ENSMUST00000195581 301 ntBASIC1.11□□□□□ -2.23
Ccdc43Q9CR29 Mir3535-201ENSMUST00000197651 147 ntBASIC1.11□□□□□ -2.23
Ccdc43Q9CR29 Olfr1401-ps1-201ENSMUST00000202296 211 ntBASIC1.11□□□□□ -2.23
Ccdc43Q9CR29 Gm22248-201ENSMUST00000082482 150 ntBASIC1.11□□□□□ -2.23
Ccdc43Q9CR29 Vmn2r-ps65-201ENSMUST00000173309 220 ntBASIC1.1□□□□□ -2.23
Ccdc43Q9CR29 Gm37763-201ENSMUST00000193445 120 ntBASIC1.1□□□□□ -2.23
Ccdc43Q9CR29 AC145736.2-201ENSMUST00000216305 365 ntBASIC1.1□□□□□ -2.23
Ccdc43Q9CR29 Mirlet7c-1-201ENSMUST00000083623 94 ntBASIC1.1□□□□□ -2.23
Ccdc43Q9CR29 Gm26111-201ENSMUST00000083969 106 ntBASIC1.1□□□□□ -2.23
Ccdc43Q9CR29 Gm24431-201ENSMUST00000104073 66 ntBASIC1.09□□□□□ -2.23
Ccdc43Q9CR29 Gm22021-201ENSMUST00000104353 107 ntBASIC1.09□□□□□ -2.23
Ccdc43Q9CR29 Gm23182-201ENSMUST00000158688 135 ntBASIC1.09□□□□□ -2.23
Ccdc43Q9CR29 Gm21518-201ENSMUST00000178115 567 ntTSL 5 BASIC1.09□□□□□ -2.23
Ccdc43Q9CR29 Gm20736-201ENSMUST00000178198 567 ntTSL 5 BASIC1.09□□□□□ -2.23
Ccdc43Q9CR29 Gm20843-201ENSMUST00000178505 567 ntTSL 5 BASIC1.09□□□□□ -2.23
Ccdc43Q9CR29 Gm21209-201ENSMUST00000178556 567 ntTSL 5 BASIC1.09□□□□□ -2.23
Ccdc43Q9CR29 Gm21258-201ENSMUST00000178673 567 ntTSL 5 BASIC1.09□□□□□ -2.23
Ccdc43Q9CR29 Gm20888-201ENSMUST00000178934 567 ntTSL 5 BASIC1.09□□□□□ -2.23
Ccdc43Q9CR29 Gm21650-201ENSMUST00000179073 567 ntTSL 5 BASIC1.09□□□□□ -2.23
Ccdc43Q9CR29 Gm20937-201ENSMUST00000180329 567 ntTSL 5 BASIC1.09□□□□□ -2.23
Ccdc43Q9CR29 Gm28330-201ENSMUST00000190353 171 ntBASIC1.09□□□□□ -2.23
Ccdc43Q9CR29 Gm44352-201ENSMUST00000196358 110 ntBASIC1.09□□□□□ -2.23
Ccdc43Q9CR29 Olfr277-ps1-201ENSMUST00000205749 285 ntBASIC1.09□□□□□ -2.23
Ccdc43Q9CR29 Gm46993-201ENSMUST00000220708 259 ntBASIC1.09□□□□□ -2.23
Ccdc43Q9CR29 Gm22704-201ENSMUST00000083027 137 ntBASIC1.09□□□□□ -2.23
Ccdc43Q9CR29 Gm22364-201ENSMUST00000083097 98 ntBASIC1.09□□□□□ -2.23
Ccdc43Q9CR29 Gm22743-201ENSMUST00000083445 133 ntBASIC1.09□□□□□ -2.23
Ccdc43Q9CR29 Snord35a-201ENSMUST00000083884 90 ntBASIC1.09□□□□□ -2.23
Ccdc43Q9CR29 Gm23893-201ENSMUST00000158106 134 ntBASIC1.08□□□□□ -2.24
Ccdc43Q9CR29 Olfr942-ps1-201ENSMUST00000215640 662 ntBASIC1.08□□□□□ -2.24
Ccdc43Q9CR29 CT033781.2-201ENSMUST00000221113 153 ntBASIC1.08□□□□□ -2.24
Ccdc43Q9CR29 CT009713.9-201ENSMUST00000223604 389 ntBASIC1.08□□□□□ -2.24
Ccdc43Q9CR29 Mir34a-201ENSMUST00000083559 102 ntBASIC1.08□□□□□ -2.24
Ccdc43Q9CR29 Gm22515-201ENSMUST00000158273 305 ntBASIC1.07□□□□□ -2.24
Ccdc43Q9CR29 Gm24154-201ENSMUST00000175261 130 ntBASIC1.07□□□□□ -2.24
Ccdc43Q9CR29 AL928567.1-201ENSMUST00000197891 138 ntBASIC1.07□□□□□ -2.24
Ccdc43Q9CR29 Gm45738-201ENSMUST00000203645 233 ntTSL 5 BASIC1.07□□□□□ -2.24
Ccdc43Q9CR29 Nbdy-205ENSMUST00000208235 132 ntAPPRIS P2 TSL 2 BASIC1.07□□□□□ -2.24
Retrieved 100 of 76,532 protein–RNA pairs in 213.2 ms