Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Gm25980-201ENSMUST00000157176 218 ntBASIC2.58□□□□□ -2
Trim8Q99PJ2 Gm23535-201ENSMUST00000157542 106 ntBASIC2.58□□□□□ -2
Trim8Q99PJ2 Gm23101-201ENSMUST00000157550 137 ntBASIC2.58□□□□□ -2
Trim8Q99PJ2 Gm26897-201ENSMUST00000180627 93 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Trim8Q99PJ2 Gm28992-201ENSMUST00000190534 139 ntBASIC2.58□□□□□ -2
Trim8Q99PJ2 Gm24474-201ENSMUST00000220504 469 ntTSL 2 BASIC2.58□□□□□ -2
Trim8Q99PJ2 Gm11351-202ENSMUST00000225724 478 ntBASIC2.58□□□□□ -2
Trim8Q99PJ2 AC124104.1-201ENSMUST00000226279 417 ntBASIC2.58□□□□□ -2
Trim8Q99PJ2 Gm23303-201ENSMUST00000082714 152 ntBASIC2.58□□□□□ -2
Trim8Q99PJ2 Mir93-201ENSMUST00000083593 88 ntBASIC2.58□□□□□ -2
Trim8Q99PJ2 Olfr1225-202ENSMUST00000216961 3231 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Trim8Q99PJ2 Gm43032-201ENSMUST00000197967 3123 ntBASIC2.57□□□□□ -2
Trim8Q99PJ2 Rps15a-ps6-201ENSMUST00000117476 393 ntBASIC2.57□□□□□ -2
Trim8Q99PJ2 Gm13756-201ENSMUST00000117618 222 ntBASIC2.57□□□□□ -2
Trim8Q99PJ2 Gm6952-201ENSMUST00000118629 159 ntBASIC2.57□□□□□ -2
Trim8Q99PJ2 Gm25280-201ENSMUST00000157269 101 ntBASIC2.57□□□□□ -2
Trim8Q99PJ2 Gm25060-201ENSMUST00000157374 130 ntBASIC2.57□□□□□ -2
Trim8Q99PJ2 Gm22586-201ENSMUST00000157507 122 ntBASIC2.57□□□□□ -2
Trim8Q99PJ2 Gm25996-201ENSMUST00000175393 117 ntBASIC2.57□□□□□ -2
Trim8Q99PJ2 Gm37545-201ENSMUST00000186512 148 ntBASIC2.57□□□□□ -2
Trim8Q99PJ2 Gm42834-201ENSMUST00000196845 256 ntBASIC2.57□□□□□ -2
Trim8Q99PJ2 Gm45386-201ENSMUST00000210194 218 ntBASIC2.57□□□□□ -2
Trim8Q99PJ2 AC134601.1-201ENSMUST00000221058 109 ntBASIC2.57□□□□□ -2
Trim8Q99PJ2 Gm24030-201ENSMUST00000083931 164 ntBASIC2.57□□□□□ -2
Trim8Q99PJ2 Gm18795-201ENSMUST00000222371 3266 ntTSL 5 BASIC2.57□□□□□ -2
Trim8Q99PJ2 AC159625.1-201ENSMUST00000220994 2625 ntBASIC2.56□□□□□ -2
Trim8Q99PJ2 Gm43706-201ENSMUST00000198767 2652 ntBASIC2.56□□□□□ -2
Trim8Q99PJ2 Gm36669-201ENSMUST00000201757 3650 ntTSL 1 (best) BASIC2.56□□□□□ -2
Trim8Q99PJ2 Gm26135-201ENSMUST00000101993 72 ntBASIC2.56□□□□□ -2
Trim8Q99PJ2 Snord89-201ENSMUST00000104516 110 ntBASIC2.56□□□□□ -2
Trim8Q99PJ2 Gm14626-201ENSMUST00000117619 216 ntBASIC2.56□□□□□ -2
Trim8Q99PJ2 Gm15861-201ENSMUST00000120979 339 ntBASIC2.56□□□□□ -2
Trim8Q99PJ2 Gm22141-201ENSMUST00000157403 277 ntBASIC2.56□□□□□ -2
Trim8Q99PJ2 Gm24958-201ENSMUST00000158009 97 ntBASIC2.56□□□□□ -2
Trim8Q99PJ2 Gm24879-201ENSMUST00000158386 143 ntBASIC2.56□□□□□ -2
Trim8Q99PJ2 Gm24837-201ENSMUST00000158683 81 ntBASIC2.56□□□□□ -2
Trim8Q99PJ2 Gm25069-201ENSMUST00000175238 86 ntBASIC2.56□□□□□ -2
Trim8Q99PJ2 Gm25380-201ENSMUST00000175463 107 ntBASIC2.56□□□□□ -2
Trim8Q99PJ2 Gm24641-201ENSMUST00000178055 107 ntBASIC2.56□□□□□ -2
Trim8Q99PJ2 Gm25484-201ENSMUST00000178217 107 ntBASIC2.56□□□□□ -2
Trim8Q99PJ2 Snord50b-201ENSMUST00000178497 72 ntBASIC2.56□□□□□ -2
Trim8Q99PJ2 Gm26138-201ENSMUST00000179236 107 ntBASIC2.56□□□□□ -2
Trim8Q99PJ2 Gm22821-201ENSMUST00000179288 107 ntBASIC2.56□□□□□ -2
Trim8Q99PJ2 Gm43587-201ENSMUST00000199590 204 ntBASIC2.56□□□□□ -2
Trim8Q99PJ2 Gm23140-201ENSMUST00000082487 107 ntBASIC2.56□□□□□ -2
Trim8Q99PJ2 Gm23298-201ENSMUST00000083181 107 ntBASIC2.56□□□□□ -2
Trim8Q99PJ2 Gm24614-201ENSMUST00000083269 107 ntBASIC2.56□□□□□ -2
Trim8Q99PJ2 Gm22057-201ENSMUST00000083387 107 ntBASIC2.56□□□□□ -2
Trim8Q99PJ2 Mir186-201ENSMUST00000083497 71 ntBASIC2.56□□□□□ -2
Trim8Q99PJ2 Gm25516-201ENSMUST00000083857 107 ntBASIC2.56□□□□□ -2
Trim8Q99PJ2 Olfr1046-202ENSMUST00000213987 2770 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Trim8Q99PJ2 Olfr1098-202ENSMUST00000111574 2885 ntAPPRIS P1 TSL 3 BASIC2.55□□□□□ -2
Trim8Q99PJ2 Scgb1b23-ps-201ENSMUST00000116009 252 ntBASIC2.55□□□□□ -2
Trim8Q99PJ2 Gm12086-201ENSMUST00000120863 228 ntBASIC2.55□□□□□ -2
Trim8Q99PJ2 Gm6025-201ENSMUST00000121517 201 ntBASIC2.55□□□□□ -2
Trim8Q99PJ2 Gm26405-201ENSMUST00000158495 100 ntBASIC2.55□□□□□ -2
Trim8Q99PJ2 Mir3965-201ENSMUST00000175570 69 ntBASIC2.55□□□□□ -2
Trim8Q99PJ2 Gm22070-201ENSMUST00000178475 107 ntBASIC2.55□□□□□ -2
Trim8Q99PJ2 Mir7014-201ENSMUST00000183853 63 ntBASIC2.55□□□□□ -2
Trim8Q99PJ2 Mir6917-201ENSMUST00000184111 61 ntBASIC2.55□□□□□ -2
Trim8Q99PJ2 Gm27991-201ENSMUST00000184804 137 ntBASIC2.55□□□□□ -2
Trim8Q99PJ2 Gm29613-201ENSMUST00000185846 313 ntBASIC2.55□□□□□ -2
Trim8Q99PJ2 Gm28076-201ENSMUST00000188337 410 ntTSL 3 BASIC2.55□□□□□ -2
Trim8Q99PJ2 Gm29544-201ENSMUST00000188860 313 ntBASIC2.55□□□□□ -2
Trim8Q99PJ2 Gm28808-201ENSMUST00000190978 313 ntBASIC2.55□□□□□ -2
Trim8Q99PJ2 Mir3969-201ENSMUST00000197106 92 ntBASIC2.55□□□□□ -2
Trim8Q99PJ2 mt-Tf-201ENSMUST00000082387 68 ntBASIC2.55□□□□□ -2
Trim8Q99PJ2 Olfr711-203ENSMUST00000216335 4724 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Trim8Q99PJ2 Traj39-201ENSMUST00000103703 63 ntAPPRIS P1 BASIC2.54□□□□□ -2
Trim8Q99PJ2 Gm25889-201ENSMUST00000157775 107 ntBASIC2.54□□□□□ -2
Trim8Q99PJ2 Mir1936-201ENSMUST00000158699 93 ntBASIC2.54□□□□□ -2
Trim8Q99PJ2 Mir6916-201ENSMUST00000184514 63 ntBASIC2.54□□□□□ -2
Trim8Q99PJ2 Mir7657-201ENSMUST00000196051 57 ntBASIC2.54□□□□□ -2
Trim8Q99PJ2 Gm18546-201ENSMUST00000197245 676 ntBASIC2.54□□□□□ -2
Trim8Q99PJ2 Gm44808-201ENSMUST00000208887 264 ntTSL 5 BASIC2.54□□□□□ -2
Trim8Q99PJ2 Gm45456-201ENSMUST00000210841 243 ntBASIC2.54□□□□□ -2
Trim8Q99PJ2 Gm38255-201ENSMUST00000194910 2996 ntBASIC2.54□□□□□ -2
Trim8Q99PJ2 Olfr229-202ENSMUST00000214904 3125 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Trim8Q99PJ2 Snora36b-201ENSMUST00000104383 132 ntBASIC2.53□□□□□ -2
Trim8Q99PJ2 Gm15067-201ENSMUST00000119534 156 ntBASIC2.53□□□□□ -2
Trim8Q99PJ2 Gm23655-201ENSMUST00000122627 105 ntBASIC2.53□□□□□ -2
Trim8Q99PJ2 Gm22281-201ENSMUST00000157198 103 ntBASIC2.53□□□□□ -2
Trim8Q99PJ2 Gm26411-201ENSMUST00000157668 107 ntBASIC2.53□□□□□ -2
Trim8Q99PJ2 Mir1951-201ENSMUST00000157981 89 ntBASIC2.53□□□□□ -2
Trim8Q99PJ2 Gm25444-201ENSMUST00000158999 113 ntBASIC2.53□□□□□ -2
Trim8Q99PJ2 Gm22510-201ENSMUST00000179304 79 ntBASIC2.53□□□□□ -2
Trim8Q99PJ2 Gm26336-201ENSMUST00000179449 79 ntBASIC2.53□□□□□ -2
Trim8Q99PJ2 Gm26390-201ENSMUST00000179628 79 ntBASIC2.53□□□□□ -2
Trim8Q99PJ2 Mir7242-201ENSMUST00000183710 79 ntBASIC2.53□□□□□ -2
Trim8Q99PJ2 Gm27878-201ENSMUST00000184000 106 ntBASIC2.53□□□□□ -2
Trim8Q99PJ2 AC153512.4-201ENSMUST00000217783 426 ntTSL 3 BASIC2.53□□□□□ -2
Trim8Q99PJ2 AC164086.1-201ENSMUST00000221038 289 ntBASIC2.53□□□□□ -2
Trim8Q99PJ2 mt-Tt-201ENSMUST00000082422 67 ntBASIC2.53□□□□□ -2
Trim8Q99PJ2 Gm25797-201ENSMUST00000082640 107 ntBASIC2.53□□□□□ -2
Trim8Q99PJ2 U2surp-202ENSMUST00000079659 7630 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Trim8Q99PJ2 Vmn2r70-201ENSMUST00000168230 2565 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2.01
Trim8Q99PJ2 Gm23772-201ENSMUST00000104433 102 ntBASIC2.52□□□□□ -2.01
Trim8Q99PJ2 Gm25368-201ENSMUST00000158847 131 ntBASIC2.52□□□□□ -2.01
Trim8Q99PJ2 Gm26160-201ENSMUST00000158965 63 ntBASIC2.52□□□□□ -2.01
Trim8Q99PJ2 Gm37918-201ENSMUST00000192071 120 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 138.6 ms