Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Gm27421-201ENSMUST00000184729 167 ntBASIC-1.73□□□□□ -2.69
Cdh23Q99PF4 AC166358.10-201ENSMUST00000220556 144 ntBASIC-1.73□□□□□ -2.69
Cdh23Q99PF4 CT030194.2-201ENSMUST00000225752 379 ntBASIC-1.73□□□□□ -2.69
Cdh23Q99PF4 Gm24612-201ENSMUST00000083267 107 ntBASIC-1.74□□□□□ -2.69
Cdh23Q99PF4 Gm25783-201ENSMUST00000122525 190 ntBASIC-1.74□□□□□ -2.69
Cdh23Q99PF4 Vmn2r-ps18-201ENSMUST00000177972 380 ntBASIC-1.74□□□□□ -2.69
Cdh23Q99PF4 Vmn2r-ps17-201ENSMUST00000178733 375 ntBASIC-1.74□□□□□ -2.69
Cdh23Q99PF4 Vmn2r-ps15-201ENSMUST00000180112 377 ntBASIC-1.74□□□□□ -2.69
Cdh23Q99PF4 Gm22509-201ENSMUST00000082775 107 ntBASIC-1.74□□□□□ -2.69
Cdh23Q99PF4 Hmgb3-ps-201ENSMUST00000162465 601 ntBASIC-1.75□□□□□ -2.69
Cdh23Q99PF4 Zfp934-201ENSMUST00000082203 993 ntTSL 5 BASIC-1.75□□□□□ -2.69
Cdh23Q99PF4 AC124687.1-201ENSMUST00000221868 189 ntBASIC-1.75□□□□□ -2.69
Cdh23Q99PF4 Gm29247-202ENSMUST00000148542 571 ntTSL 2 BASIC-1.75□□□□□ -2.69
Cdh23Q99PF4 Gm26150-201ENSMUST00000157426 151 ntBASIC-1.75□□□□□ -2.69
Cdh23Q99PF4 Gm24728-201ENSMUST00000158226 125 ntBASIC-1.75□□□□□ -2.69
Cdh23Q99PF4 Gm24006-201ENSMUST00000158462 132 ntBASIC-1.75□□□□□ -2.69
Cdh23Q99PF4 Gm44176-201ENSMUST00000204336 276 ntTSL 5 BASIC-1.75□□□□□ -2.69
Cdh23Q99PF4 Gm25357-201ENSMUST00000082745 72 ntBASIC-1.75□□□□□ -2.69
Cdh23Q99PF4 Gm16373-201ENSMUST00000129517 303 ntBASIC-1.76□□□□□ -2.69
Cdh23Q99PF4 Gm26133-201ENSMUST00000157363 100 ntBASIC-1.76□□□□□ -2.69
Cdh23Q99PF4 4930555M17Rik-201ENSMUST00000176666 402 ntTSL 1 (best) BASIC-1.76□□□□□ -2.69
Cdh23Q99PF4 Gm29535-201ENSMUST00000185723 109 ntBASIC-1.76□□□□□ -2.69
Cdh23Q99PF4 Gm28143-201ENSMUST00000191082 109 ntBASIC-1.76□□□□□ -2.69
Cdh23Q99PF4 AC125190.3-201ENSMUST00000223224 121 ntBASIC-1.76□□□□□ -2.69
Cdh23Q99PF4 Gm23676-201ENSMUST00000157314 105 ntBASIC-1.76□□□□□ -2.69
Cdh23Q99PF4 Gm24547-201ENSMUST00000158649 149 ntBASIC-1.76□□□□□ -2.69
Cdh23Q99PF4 Gm45738-201ENSMUST00000203645 233 ntTSL 5 BASIC-1.76□□□□□ -2.69
Cdh23Q99PF4 Gm23415-201ENSMUST00000175519 83 ntBASIC-1.76□□□□□ -2.69
Cdh23Q99PF4 Snora26-201ENSMUST00000175614 121 ntBASIC-1.76□□□□□ -2.69
Cdh23Q99PF4 mt-Co3-201ENSMUST00000082409 784 ntAPPRIS P1 BASIC-1.76□□□□□ -2.69
Cdh23Q99PF4 Gm22097-201ENSMUST00000157929 278 ntBASIC-1.77□□□□□ -2.69
Cdh23Q99PF4 Gm23068-201ENSMUST00000158239 293 ntBASIC-1.77□□□□□ -2.69
Cdh23Q99PF4 Gm36406-202ENSMUST00000203761 551 ntTSL 5 BASIC-1.77□□□□□ -2.69
Cdh23Q99PF4 Mir466b-7-201ENSMUST00000103804 88 ntBASIC-1.77□□□□□ -2.69
Cdh23Q99PF4 Mir466b-5-201ENSMUST00000103900 88 ntBASIC-1.77□□□□□ -2.69
Cdh23Q99PF4 Gm25879-201ENSMUST00000104330 107 ntBASIC-1.77□□□□□ -2.69
Cdh23Q99PF4 Gm28305-201ENSMUST00000147249 365 ntAPPRIS P1 TSL 2 BASIC-1.78□□□□□ -2.69
Cdh23Q99PF4 Gm42718-201ENSMUST00000197319 2681 ntBASIC-1.78□□□□□ -2.69
Cdh23Q99PF4 Gm25756-201ENSMUST00000103990 136 ntBASIC-1.78□□□□□ -2.69
Cdh23Q99PF4 Gm26405-201ENSMUST00000158495 100 ntBASIC-1.78□□□□□ -2.69
Cdh23Q99PF4 AC122341.1-201ENSMUST00000227291 560 ntBASIC-1.78□□□□□ -2.69
Cdh23Q99PF4 Gm22771-201ENSMUST00000104449 91 ntBASIC-1.78□□□□□ -2.69
Cdh23Q99PF4 Gm22038-201ENSMUST00000157277 242 ntBASIC-1.78□□□□□ -2.69
Cdh23Q99PF4 Gm25637-201ENSMUST00000157529 107 ntBASIC-1.78□□□□□ -2.69
Cdh23Q99PF4 Gm23974-201ENSMUST00000083321 131 ntBASIC-1.78□□□□□ -2.69
Cdh23Q99PF4 Rgs13-202ENSMUST00000111941 1545 ntAPPRIS P1 TSL 1 (best) BASIC-1.78□□□□□ -2.7
Cdh23Q99PF4 Gm14368-201ENSMUST00000145305 415 ntBASIC-1.79□□□□□ -2.7
Cdh23Q99PF4 Gm24726-201ENSMUST00000158232 121 ntBASIC-1.79□□□□□ -2.7
Cdh23Q99PF4 Gm24561-201ENSMUST00000175182 95 ntBASIC-1.79□□□□□ -2.7
Cdh23Q99PF4 Tas2r107-201ENSMUST00000065781 1032 ntAPPRIS P1 BASIC-1.79□□□□□ -2.7
Cdh23Q99PF4 Gm22678-201ENSMUST00000116974 101 ntBASIC-1.79□□□□□ -2.7
Cdh23Q99PF4 Gm26206-201ENSMUST00000082908 110 ntBASIC-1.79□□□□□ -2.7
Cdh23Q99PF4 Mir377-201ENSMUST00000083504 68 ntBASIC-1.79□□□□□ -2.7
Cdh23Q99PF4 Gm25882-201ENSMUST00000157784 85 ntBASIC-1.79□□□□□ -2.7
Cdh23Q99PF4 Gm42622-201ENSMUST00000197229 355 ntBASIC-1.79□□□□□ -2.7
Cdh23Q99PF4 Gm25933-201ENSMUST00000178943 108 ntBASIC-1.8□□□□□ -2.7
Cdh23Q99PF4 CT030184.1-201ENSMUST00000222393 416 ntBASIC-1.8□□□□□ -2.7
Cdh23Q99PF4 AC160115.1-201ENSMUST00000224678 1574 ntBASIC-1.8□□□□□ -2.7
Cdh23Q99PF4 Gm22652-201ENSMUST00000083207 131 ntBASIC-1.8□□□□□ -2.7
Cdh23Q99PF4 Gm14298-201ENSMUST00000139032 237 ntBASIC-1.8□□□□□ -2.7
Cdh23Q99PF4 1700129C05Rik-203ENSMUST00000162271 325 ntAPPRIS ALT2 TSL 3 BASIC-1.8□□□□□ -2.7
Cdh23Q99PF4 Gm25243-201ENSMUST00000174912 207 ntBASIC-1.8□□□□□ -2.7
Cdh23Q99PF4 mt-Nd2-201ENSMUST00000082396 1038 ntAPPRIS P1 BASIC-1.8□□□□□ -2.7
Cdh23Q99PF4 Gm15030-201ENSMUST00000119804 484 ntBASIC-1.81□□□□□ -2.7
Cdh23Q99PF4 Mir8106-201ENSMUST00000184520 139 ntBASIC-1.81□□□□□ -2.7
Cdh23Q99PF4 Gm24856-201ENSMUST00000082809 107 ntBASIC-1.81□□□□□ -2.7
Cdh23Q99PF4 Gm25403-201ENSMUST00000082971 143 ntBASIC-1.81□□□□□ -2.7
Cdh23Q99PF4 Gm14638-201ENSMUST00000121338 216 ntBASIC-1.82□□□□□ -2.7
Cdh23Q99PF4 Gm22100-201ENSMUST00000157926 63 ntBASIC-1.82□□□□□ -2.7
Cdh23Q99PF4 Gm23207-201ENSMUST00000158665 102 ntBASIC-1.82□□□□□ -2.7
Cdh23Q99PF4 Gm26870-202ENSMUST00000181572 1143 ntTSL 5 BASIC-1.82□□□□□ -2.7
Cdh23Q99PF4 Gm23166-201ENSMUST00000157164 101 ntBASIC-1.82□□□□□ -2.7
Cdh23Q99PF4 AL929285.1-201ENSMUST00000215522 229 ntBASIC-1.82□□□□□ -2.7
Cdh23Q99PF4 Gm22466-201ENSMUST00000175278 69 ntBASIC-1.82□□□□□ -2.7
Cdh23Q99PF4 Gm29026-201ENSMUST00000187787 315 ntBASIC-1.82□□□□□ -2.7
Cdh23Q99PF4 Gm28855-201ENSMUST00000188680 315 ntBASIC-1.82□□□□□ -2.7
Cdh23Q99PF4 Gm28939-201ENSMUST00000190351 315 ntBASIC-1.82□□□□□ -2.7
Cdh23Q99PF4 Gm38364-201ENSMUST00000191814 179 ntBASIC-1.82□□□□□ -2.7
Cdh23Q99PF4 Gm22543-201ENSMUST00000104347 94 ntBASIC-1.83□□□□□ -2.7
Cdh23Q99PF4 Gm14517-201ENSMUST00000119040 337 ntBASIC-1.83□□□□□ -2.7
Cdh23Q99PF4 Gm11334-201ENSMUST00000121969 156 ntBASIC-1.83□□□□□ -2.7
Cdh23Q99PF4 Rnu7-201ENSMUST00000158458 62 ntBASIC-1.83□□□□□ -2.7
Cdh23Q99PF4 Mir1949-202ENSMUST00000199259 70 ntBASIC-1.83□□□□□ -2.7
Cdh23Q99PF4 AC172027.1-201ENSMUST00000217659 337 ntBASIC-1.83□□□□□ -2.7
Cdh23Q99PF4 Gm11429-201ENSMUST00000119089 144 ntBASIC-1.83□□□□□ -2.7
Cdh23Q99PF4 AC132833.2-201ENSMUST00000228699 157 ntBASIC-1.84□□□□□ -2.7
Cdh23Q99PF4 Gm24623-201ENSMUST00000082616 194 ntBASIC-1.84□□□□□ -2.7
Cdh23Q99PF4 Gm26339-201ENSMUST00000102368 99 ntBASIC-1.84□□□□□ -2.7
Cdh23Q99PF4 Ranbp2-ps6-201ENSMUST00000183722 381 ntBASIC-1.84□□□□□ -2.7
Cdh23Q99PF4 Gm25897-201ENSMUST00000083709 107 ntBASIC-1.84□□□□□ -2.7
Cdh23Q99PF4 Gm18417-201ENSMUST00000176564 648 ntBASIC-1.84□□□□□ -2.7
Cdh23Q99PF4 Gm22887-201ENSMUST00000178586 107 ntBASIC-1.84□□□□□ -2.7
Cdh23Q99PF4 Gm34408-201ENSMUST00000222104 655 ntTSL 5 BASIC-1.84□□□□□ -2.7
Cdh23Q99PF4 CT954323.1-201ENSMUST00000222774 229 ntBASIC-1.84□□□□□ -2.7
Cdh23Q99PF4 Gm17148-201ENSMUST00000164702 249 ntBASIC-1.85□□□□□ -2.71
Cdh23Q99PF4 Gm25750-201ENSMUST00000175483 112 ntBASIC-1.85□□□□□ -2.71
Cdh23Q99PF4 Gm28299-201ENSMUST00000189908 339 ntBASIC-1.85□□□□□ -2.71
Cdh23Q99PF4 Gm37934-201ENSMUST00000192902 402 ntBASIC-1.85□□□□□ -2.71
Cdh23Q99PF4 B230307C23Rik-201ENSMUST00000113729 192 ntTSL 5 BASIC-1.85□□□□□ -2.71
Cdh23Q99PF4 Mir721-201ENSMUST00000200230 88 ntBASIC-1.85□□□□□ -2.71
Retrieved 100 of 76,532 protein–RNA pairs in 162.5 ms