Protein–RNA interactions for Protein: Q99NB9

Sf3b1, Splicing factor 3B subunit 1, mousemouse

Known RBP Predictions only

Length 1,304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1Q99NB9 Gm24164-201ENSMUST00000093663 104 ntBASIC1.1□□□□□ -2.23
Sf3b1Q99NB9 Gm6377-201ENSMUST00000060013 2793 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.24
Sf3b1Q99NB9 Igkv13-84-201ENSMUST00000103339 347 ntAPPRIS P1 BASIC1.09□□□□□ -2.24
Sf3b1Q99NB9 Gm14761-201ENSMUST00000121363 262 ntBASIC1.09□□□□□ -2.24
Sf3b1Q99NB9 Gm14298-201ENSMUST00000139032 237 ntBASIC1.09□□□□□ -2.24
Sf3b1Q99NB9 Gm16356-201ENSMUST00000143300 169 ntBASIC1.09□□□□□ -2.24
Sf3b1Q99NB9 Gm43602-201ENSMUST00000196772 300 ntBASIC1.09□□□□□ -2.24
Sf3b1Q99NB9 AC154296.2-201ENSMUST00000214696 545 ntBASIC1.09□□□□□ -2.24
Sf3b1Q99NB9 Gm25930-201ENSMUST00000082785 107 ntBASIC1.09□□□□□ -2.24
Sf3b1Q99NB9 Gm25937-201ENSMUST00000083912 107 ntBASIC1.09□□□□□ -2.24
Sf3b1Q99NB9 Gm24283-201ENSMUST00000104233 107 ntBASIC1.08□□□□□ -2.24
Sf3b1Q99NB9 Gm25506-201ENSMUST00000104339 70 ntBASIC1.08□□□□□ -2.24
Sf3b1Q99NB9 Gm14307-201ENSMUST00000118930 291 ntBASIC1.08□□□□□ -2.24
Sf3b1Q99NB9 Gm24630-201ENSMUST00000122768 106 ntBASIC1.08□□□□□ -2.24
Sf3b1Q99NB9 Gm14297-201ENSMUST00000129110 291 ntBASIC1.08□□□□□ -2.24
Sf3b1Q99NB9 Gm16362-201ENSMUST00000135189 214 ntBASIC1.08□□□□□ -2.24
Sf3b1Q99NB9 Gm25663-201ENSMUST00000157698 135 ntBASIC1.08□□□□□ -2.24
Sf3b1Q99NB9 Gm23779-201ENSMUST00000157938 64 ntBASIC1.08□□□□□ -2.24
Sf3b1Q99NB9 Gm23893-201ENSMUST00000158106 134 ntBASIC1.08□□□□□ -2.24
Sf3b1Q99NB9 Gm25671-201ENSMUST00000178612 105 ntBASIC1.08□□□□□ -2.24
Sf3b1Q99NB9 Gm23307-201ENSMUST00000179167 105 ntBASIC1.08□□□□□ -2.24
Sf3b1Q99NB9 Gm25286-201ENSMUST00000179790 105 ntBASIC1.08□□□□□ -2.24
Sf3b1Q99NB9 Gm45268-201ENSMUST00000210046 370 ntBASIC1.08□□□□□ -2.24
Sf3b1Q99NB9 AC164612.2-202ENSMUST00000216314 253 ntBASIC1.08□□□□□ -2.24
Sf3b1Q99NB9 Gm23404-201ENSMUST00000082543 97 ntBASIC1.08□□□□□ -2.24
Sf3b1Q99NB9 Vmn1r75-202ENSMUST00000226622 6638 ntAPPRIS P2 BASIC1.07□□□□□ -2.24
Sf3b1Q99NB9 Mir767-201ENSMUST00000103256 107 ntBASIC1.07□□□□□ -2.24
Sf3b1Q99NB9 Gm22085-201ENSMUST00000158344 110 ntBASIC1.07□□□□□ -2.24
Sf3b1Q99NB9 Gm19777-201ENSMUST00000191940 358 ntBASIC1.07□□□□□ -2.24
Sf3b1Q99NB9 AC157476.1-201ENSMUST00000215555 169 ntBASIC1.07□□□□□ -2.24
Sf3b1Q99NB9 CT009713.9-201ENSMUST00000223604 389 ntBASIC1.07□□□□□ -2.24
Sf3b1Q99NB9 Mir27b-201ENSMUST00000083541 73 ntBASIC1.07□□□□□ -2.24
Sf3b1Q99NB9 Gm22545-201ENSMUST00000104350 132 ntBASIC1.06□□□□□ -2.24
Sf3b1Q99NB9 Gm14491-201ENSMUST00000121919 199 ntBASIC1.06□□□□□ -2.24
Sf3b1Q99NB9 Gm23262-201ENSMUST00000158323 168 ntBASIC1.06□□□□□ -2.24
Sf3b1Q99NB9 Gm23474-201ENSMUST00000158884 75 ntBASIC1.06□□□□□ -2.24
Sf3b1Q99NB9 Gm21954-201ENSMUST00000179544 51 ntAPPRIS P1 TSL 5 BASIC1.06□□□□□ -2.24
Sf3b1Q99NB9 Mir7039-201ENSMUST00000183852 85 ntBASIC1.06□□□□□ -2.24
Sf3b1Q99NB9 Mir6380-201ENSMUST00000184334 81 ntBASIC1.06□□□□□ -2.24
Sf3b1Q99NB9 Ranbp2-ps2-201ENSMUST00000184379 370 ntBASIC1.06□□□□□ -2.24
Sf3b1Q99NB9 Gm28925-201ENSMUST00000188586 168 ntBASIC1.06□□□□□ -2.24
Sf3b1Q99NB9 Gm29014-201ENSMUST00000191422 326 ntBASIC1.06□□□□□ -2.24
Sf3b1Q99NB9 Gm42855-201ENSMUST00000197388 253 ntBASIC1.06□□□□□ -2.24
Sf3b1Q99NB9 Gm43199-201ENSMUST00000200019 307 ntBASIC1.06□□□□□ -2.24
Sf3b1Q99NB9 Olfr1401-ps1-201ENSMUST00000202296 211 ntBASIC1.06□□□□□ -2.24
Sf3b1Q99NB9 Gm43976-201ENSMUST00000203637 235 ntBASIC1.06□□□□□ -2.24
Sf3b1Q99NB9 Gm44687-201ENSMUST00000204975 235 ntBASIC1.06□□□□□ -2.24
Sf3b1Q99NB9 CT954323.1-201ENSMUST00000222774 229 ntBASIC1.06□□□□□ -2.24
Sf3b1Q99NB9 AC173482.5-201ENSMUST00000224181 327 ntBASIC1.06□□□□□ -2.24
Sf3b1Q99NB9 CT025630.1-201ENSMUST00000227901 172 ntBASIC1.06□□□□□ -2.24
Sf3b1Q99NB9 Gm25128-201ENSMUST00000083339 76 ntBASIC1.06□□□□□ -2.24
Sf3b1Q99NB9 Olfr832-202ENSMUST00000218385 4435 ntAPPRIS P1 TSL 5 BASIC1.06□□□□□ -2.24
Sf3b1Q99NB9 n-R5s188-201ENSMUST00000122646 105 ntBASIC1.05□□□□□ -2.24
Sf3b1Q99NB9 Gm23106-201ENSMUST00000157554 101 ntBASIC1.05□□□□□ -2.24
Sf3b1Q99NB9 Gm24777-201ENSMUST00000157644 107 ntBASIC1.05□□□□□ -2.24
Sf3b1Q99NB9 Gm24808-201ENSMUST00000157993 118 ntBASIC1.05□□□□□ -2.24
Sf3b1Q99NB9 Gm23759-201ENSMUST00000158351 268 ntBASIC1.05□□□□□ -2.24
Sf3b1Q99NB9 Mir6394-201ENSMUST00000184738 99 ntBASIC1.05□□□□□ -2.24
Sf3b1Q99NB9 Gm29242-201ENSMUST00000186570 457 ntTSL 5 BASIC1.05□□□□□ -2.24
Sf3b1Q99NB9 Gm44325-201ENSMUST00000196757 77 ntBASIC1.05□□□□□ -2.24
Sf3b1Q99NB9 Gm42506-201ENSMUST00000202009 150 ntBASIC1.05□□□□□ -2.24
Sf3b1Q99NB9 AC109212.1-201ENSMUST00000215561 427 ntBASIC1.05□□□□□ -2.24
Sf3b1Q99NB9 Gm26224-201ENSMUST00000082506 80 ntBASIC1.05□□□□□ -2.24
Sf3b1Q99NB9 Gm12647-201ENSMUST00000118977 265 ntBASIC1.04□□□□□ -2.24
Sf3b1Q99NB9 Gm11834-201ENSMUST00000122257 585 ntBASIC1.04□□□□□ -2.24
Sf3b1Q99NB9 Gm26213-201ENSMUST00000158582 110 ntBASIC1.04□□□□□ -2.24
Sf3b1Q99NB9 Gm22565-201ENSMUST00000175540 69 ntBASIC1.04□□□□□ -2.24
Sf3b1Q99NB9 Mir7091-201ENSMUST00000184075 79 ntBASIC1.04□□□□□ -2.24
Sf3b1Q99NB9 Klk1b28-ps-201ENSMUST00000206374 217 ntBASIC1.04□□□□□ -2.24
Sf3b1Q99NB9 Gm15379-201ENSMUST00000121224 648 ntBASIC1.03□□□□□ -2.24
Sf3b1Q99NB9 Mup-ps22-201ENSMUST00000121611 243 ntBASIC1.03□□□□□ -2.24
Sf3b1Q99NB9 Gm22883-201ENSMUST00000157376 106 ntBASIC1.03□□□□□ -2.24
Sf3b1Q99NB9 Gm22233-201ENSMUST00000157464 114 ntBASIC1.03□□□□□ -2.24
Sf3b1Q99NB9 Gm25868-201ENSMUST00000158253 114 ntBASIC1.03□□□□□ -2.24
Sf3b1Q99NB9 Gm21518-201ENSMUST00000178115 567 ntTSL 5 BASIC1.03□□□□□ -2.24
Sf3b1Q99NB9 Gm20736-201ENSMUST00000178198 567 ntTSL 5 BASIC1.03□□□□□ -2.24
Sf3b1Q99NB9 Gm20843-201ENSMUST00000178505 567 ntTSL 5 BASIC1.03□□□□□ -2.24
Sf3b1Q99NB9 Gm21209-201ENSMUST00000178556 567 ntTSL 5 BASIC1.03□□□□□ -2.24
Sf3b1Q99NB9 Gm21258-201ENSMUST00000178673 567 ntTSL 5 BASIC1.03□□□□□ -2.24
Sf3b1Q99NB9 Gm20888-201ENSMUST00000178934 567 ntTSL 5 BASIC1.03□□□□□ -2.24
Sf3b1Q99NB9 Gm21650-201ENSMUST00000179073 567 ntTSL 5 BASIC1.03□□□□□ -2.24
Sf3b1Q99NB9 Gm20937-201ENSMUST00000180329 567 ntTSL 5 BASIC1.03□□□□□ -2.24
Sf3b1Q99NB9 Rpl23a-ps7-201ENSMUST00000185437 460 ntBASIC1.03□□□□□ -2.24
Sf3b1Q99NB9 Gm37845-201ENSMUST00000194977 355 ntBASIC1.03□□□□□ -2.24
Sf3b1Q99NB9 Snora41-201ENSMUST00000082668 132 ntBASIC1.03□□□□□ -2.24
Sf3b1Q99NB9 Gm37824-201ENSMUST00000193430 3236 ntBASIC1.03□□□□□ -2.25
Sf3b1Q99NB9 Olfr1154-202ENSMUST00000215017 2917 ntAPPRIS P1 TSL 5 BASIC1.02□□□□□ -2.25
Sf3b1Q99NB9 Gm22021-201ENSMUST00000104353 107 ntBASIC1.02□□□□□ -2.25
Sf3b1Q99NB9 Gm10974-201ENSMUST00000107486 126 ntAPPRIS P1 TSL 5 BASIC1.02□□□□□ -2.25
Sf3b1Q99NB9 Gm11792-201ENSMUST00000120640 168 ntBASIC1.02□□□□□ -2.25
Sf3b1Q99NB9 Gm11334-201ENSMUST00000121969 156 ntBASIC1.02□□□□□ -2.25
Sf3b1Q99NB9 n-R5s157-201ENSMUST00000122543 121 ntBASIC1.02□□□□□ -2.25
Sf3b1Q99NB9 Gm24440-201ENSMUST00000157236 63 ntBASIC1.02□□□□□ -2.25
Sf3b1Q99NB9 Gm24512-201ENSMUST00000174963 65 ntBASIC1.02□□□□□ -2.25
Sf3b1Q99NB9 Olfr942-ps1-201ENSMUST00000215640 662 ntBASIC1.02□□□□□ -2.25
Sf3b1Q99NB9 Gm25079-201ENSMUST00000082529 203 ntBASIC1.02□□□□□ -2.25
Sf3b1Q99NB9 Gm23412-201ENSMUST00000083017 107 ntBASIC1.02□□□□□ -2.25
Sf3b1Q99NB9 Gm22364-201ENSMUST00000083097 98 ntBASIC1.02□□□□□ -2.25
Sf3b1Q99NB9 Gm26111-201ENSMUST00000083969 106 ntBASIC1.02□□□□□ -2.25
Sf3b1Q99NB9 Gm25781-201ENSMUST00000122527 84 ntBASIC1.01□□□□□ -2.25
Retrieved 100 of 76,532 protein–RNA pairs in 98.7 ms