Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 Gm15861-201ENSMUST00000120979 339 ntBASIC2.37□□□□□ -2.03
Ccdc87Q8CDL9 Gm23854-201ENSMUST00000158378 108 ntBASIC2.37□□□□□ -2.03
Ccdc87Q8CDL9 Gm25015-201ENSMUST00000158400 128 ntBASIC2.37□□□□□ -2.03
Ccdc87Q8CDL9 Gm23194-201ENSMUST00000158813 105 ntBASIC2.37□□□□□ -2.03
Ccdc87Q8CDL9 Mir6406-201ENSMUST00000183592 120 ntBASIC2.37□□□□□ -2.03
Ccdc87Q8CDL9 Mir7017-201ENSMUST00000184894 62 ntBASIC2.37□□□□□ -2.03
Ccdc87Q8CDL9 Mir7226-201ENSMUST00000184953 60 ntBASIC2.37□□□□□ -2.03
Ccdc87Q8CDL9 AC168056.1-201ENSMUST00000225270 180 ntBASIC2.37□□□□□ -2.03
Ccdc87Q8CDL9 AC127371.3-201ENSMUST00000228129 415 ntBASIC2.37□□□□□ -2.03
Ccdc87Q8CDL9 Gpr174-207ENSMUST00000178838 4955 ntAPPRIS P1 TSL 2 BASIC2.36□□□□□ -2.03
Ccdc87Q8CDL9 Olfr711-203ENSMUST00000216335 4724 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Ccdc87Q8CDL9 Snord19-201ENSMUST00000104609 76 ntBASIC2.36□□□□□ -2.03
Ccdc87Q8CDL9 Gm16032-201ENSMUST00000118534 168 ntBASIC2.36□□□□□ -2.03
Ccdc87Q8CDL9 Gm13467-201ENSMUST00000145568 281 ntTSL 5 BASIC2.36□□□□□ -2.03
Ccdc87Q8CDL9 Gm26412-201ENSMUST00000157666 55 ntBASIC2.36□□□□□ -2.03
Ccdc87Q8CDL9 Gm23209-201ENSMUST00000158667 110 ntBASIC2.36□□□□□ -2.03
Ccdc87Q8CDL9 Gm25368-201ENSMUST00000158847 131 ntBASIC2.36□□□□□ -2.03
Ccdc87Q8CDL9 Olfr1366-201ENSMUST00000168629 1054 ntAPPRIS ALT2 BASIC2.36□□□□□ -2.03
Ccdc87Q8CDL9 Gm27928-201ENSMUST00000183747 256 ntBASIC2.36□□□□□ -2.03
Ccdc87Q8CDL9 AC126672.1-201ENSMUST00000217096 396 ntBASIC2.36□□□□□ -2.03
Ccdc87Q8CDL9 Olfr1366-204ENSMUST00000218154 1054 ntAPPRIS P2 BASIC2.36□□□□□ -2.03
Ccdc87Q8CDL9 AC122242.1-201ENSMUST00000224650 304 ntBASIC2.36□□□□□ -2.03
Ccdc87Q8CDL9 Mir151-201ENSMUST00000083678 68 ntBASIC2.36□□□□□ -2.03
Ccdc87Q8CDL9 Olfr1044-202ENSMUST00000215171 3266 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Ccdc87Q8CDL9 Usp9y-201ENSMUST00000091188 8094 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
Ccdc87Q8CDL9 Olfr1153-202ENSMUST00000217436 2144 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Ccdc87Q8CDL9 Ifi203-209ENSMUST00000156895 3605 ntAPPRIS ALT2 TSL 1 (best) BASIC2.36□□□□□ -2.03
Ccdc87Q8CDL9 Olfr1442-202ENSMUST00000207341 3126 ntAPPRIS P1 TSL 3 BASIC2.35□□□□□ -2.03
Ccdc87Q8CDL9 Gm14588-201ENSMUST00000119895 172 ntBASIC2.35□□□□□ -2.03
Ccdc87Q8CDL9 Gm23390-201ENSMUST00000157393 106 ntBASIC2.35□□□□□ -2.03
Ccdc87Q8CDL9 Gm22337-201ENSMUST00000157721 132 ntBASIC2.35□□□□□ -2.03
Ccdc87Q8CDL9 Gm25834-201ENSMUST00000158916 101 ntBASIC2.35□□□□□ -2.03
Ccdc87Q8CDL9 Gm27399-201ENSMUST00000184250 78 ntBASIC2.35□□□□□ -2.03
Ccdc87Q8CDL9 Gm29347-201ENSMUST00000186695 449 ntTSL 3 BASIC2.35□□□□□ -2.03
Ccdc87Q8CDL9 Gm29604-201ENSMUST00000187176 163 ntBASIC2.35□□□□□ -2.03
Ccdc87Q8CDL9 Gm38183-201ENSMUST00000193189 205 ntBASIC2.35□□□□□ -2.03
Ccdc87Q8CDL9 Igkv13-76-201ENSMUST00000197621 347 ntBASIC2.35□□□□□ -2.03
Ccdc87Q8CDL9 Gm20083-201ENSMUST00000205849 751 ntTSL 3 BASIC2.35□□□□□ -2.03
Ccdc87Q8CDL9 AC154636.2-201ENSMUST00000222538 161 ntBASIC2.35□□□□□ -2.03
Ccdc87Q8CDL9 AC168062.3-201ENSMUST00000227025 165 ntBASIC2.35□□□□□ -2.03
Ccdc87Q8CDL9 Gm24044-201ENSMUST00000083107 156 ntBASIC2.35□□□□□ -2.03
Ccdc87Q8CDL9 Gm25513-201ENSMUST00000083861 162 ntBASIC2.35□□□□□ -2.03
Ccdc87Q8CDL9 Olfr1002-202ENSMUST00000215548 2295 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
Ccdc87Q8CDL9 Gm13801-201ENSMUST00000120750 160 ntBASIC2.34□□□□□ -2.03
Ccdc87Q8CDL9 Gm13797-201ENSMUST00000121792 120 ntBASIC2.34□□□□□ -2.03
Ccdc87Q8CDL9 Gm13345-201ENSMUST00000121928 228 ntBASIC2.34□□□□□ -2.03
Ccdc87Q8CDL9 Gm12068-201ENSMUST00000153153 376 ntTSL 3 BASIC2.34□□□□□ -2.03
Ccdc87Q8CDL9 Gm24851-201ENSMUST00000158028 103 ntBASIC2.34□□□□□ -2.03
Ccdc87Q8CDL9 Vmn2r-ps20-201ENSMUST00000179853 382 ntBASIC2.34□□□□□ -2.03
Ccdc87Q8CDL9 Mir6925-201ENSMUST00000197857 70 ntBASIC2.34□□□□□ -2.03
Ccdc87Q8CDL9 Gm43021-201ENSMUST00000198692 337 ntTSL 3 BASIC2.34□□□□□ -2.03
Ccdc87Q8CDL9 Gm26204-201ENSMUST00000082906 107 ntBASIC2.34□□□□□ -2.03
Ccdc87Q8CDL9 Mir301-201ENSMUST00000083655 86 ntBASIC2.34□□□□□ -2.03
Ccdc87Q8CDL9 Ppp4r3c-ps-201ENSMUST00000151416 2445 ntBASIC2.33□□□□□ -2.04
Ccdc87Q8CDL9 Traj20-201ENSMUST00000103721 58 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
Ccdc87Q8CDL9 Mir6388-201ENSMUST00000184417 75 ntBASIC2.33□□□□□ -2.04
Ccdc87Q8CDL9 Gm27979-201ENSMUST00000185126 56 ntBASIC2.33□□□□□ -2.04
Ccdc87Q8CDL9 Gm33866-201ENSMUST00000196911 289 ntBASIC2.33□□□□□ -2.04
Ccdc87Q8CDL9 AC160863.1-201ENSMUST00000218412 317 ntBASIC2.33□□□□□ -2.04
Ccdc87Q8CDL9 Mir471-201ENSMUST00000093596 67 ntBASIC2.33□□□□□ -2.04
Ccdc87Q8CDL9 AC125374.3-201ENSMUST00000214983 2810 ntBASIC2.33□□□□□ -2.04
Ccdc87Q8CDL9 Gm25538-201ENSMUST00000101943 107 ntBASIC2.32□□□□□ -2.04
Ccdc87Q8CDL9 Gm26154-201ENSMUST00000102339 96 ntBASIC2.32□□□□□ -2.04
Ccdc87Q8CDL9 Gm22149-201ENSMUST00000104442 136 ntBASIC2.32□□□□□ -2.04
Ccdc87Q8CDL9 n-R5s187-201ENSMUST00000122769 111 ntBASIC2.32□□□□□ -2.04
Ccdc87Q8CDL9 Gm23350-201ENSMUST00000158429 103 ntBASIC2.32□□□□□ -2.04
Ccdc87Q8CDL9 Gm22075-201ENSMUST00000158599 192 ntBASIC2.32□□□□□ -2.04
Ccdc87Q8CDL9 Gm27585-201ENSMUST00000183717 199 ntBASIC2.32□□□□□ -2.04
Ccdc87Q8CDL9 Gm25130-201ENSMUST00000082650 156 ntBASIC2.32□□□□□ -2.04
Ccdc87Q8CDL9 Gm25634-201ENSMUST00000082667 105 ntBASIC2.32□□□□□ -2.04
Ccdc87Q8CDL9 Mir155-201ENSMUST00000083463 65 ntBASIC2.32□□□□□ -2.04
Ccdc87Q8CDL9 Snora69-201ENSMUST00000083708 131 ntBASIC2.32□□□□□ -2.04
Ccdc87Q8CDL9 Snora33-201ENSMUST00000093556 129 ntBASIC2.32□□□□□ -2.04
Ccdc87Q8CDL9 AC158598.1-201ENSMUST00000214349 3847 ntBASIC2.31□□□□□ -2.04
Ccdc87Q8CDL9 Gm15214-201ENSMUST00000122155 470 ntBASIC2.31□□□□□ -2.04
Ccdc87Q8CDL9 Mir1949-201ENSMUST00000157434 141 ntBASIC2.31□□□□□ -2.04
Ccdc87Q8CDL9 Gm22553-201ENSMUST00000157797 295 ntBASIC2.31□□□□□ -2.04
Ccdc87Q8CDL9 Gm22803-201ENSMUST00000158049 283 ntBASIC2.31□□□□□ -2.04
Ccdc87Q8CDL9 Gm25994-201ENSMUST00000175392 101 ntBASIC2.31□□□□□ -2.04
Ccdc87Q8CDL9 Rnu6-ps2-201ENSMUST00000178059 107 ntBASIC2.31□□□□□ -2.04
Ccdc87Q8CDL9 Mir322-201ENSMUST00000083484 95 ntBASIC2.31□□□□□ -2.04
Ccdc87Q8CDL9 Mir384-201ENSMUST00000083565 88 ntBASIC2.31□□□□□ -2.04
Ccdc87Q8CDL9 Mir107-201ENSMUST00000083660 87 ntBASIC2.31□□□□□ -2.04
Ccdc87Q8CDL9 Gm10217-201ENSMUST00000088080 135 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
Ccdc87Q8CDL9 Ppp1r3a-201ENSMUST00000045096 6965 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
Ccdc87Q8CDL9 Zfp160-201ENSMUST00000088811 3791 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
Ccdc87Q8CDL9 Gm8935-202ENSMUST00000105727 1959 ntBASIC2.3□□□□□ -2.04
Ccdc87Q8CDL9 Gm38255-201ENSMUST00000194910 2996 ntBASIC2.3□□□□□ -2.04
Ccdc87Q8CDL9 Gm13433-201ENSMUST00000121701 240 ntBASIC2.3□□□□□ -2.04
Ccdc87Q8CDL9 Gm22093-201ENSMUST00000158980 111 ntBASIC2.3□□□□□ -2.04
Ccdc87Q8CDL9 Mir6997-201ENSMUST00000184313 71 ntBASIC2.3□□□□□ -2.04
Ccdc87Q8CDL9 Gm44477-201ENSMUST00000199661 110 ntBASIC2.3□□□□□ -2.04
Ccdc87Q8CDL9 Gm45116-201ENSMUST00000207392 275 ntBASIC2.3□□□□□ -2.04
Ccdc87Q8CDL9 Gm38407-201ENSMUST00000218017 474 ntTSL 2 BASIC2.3□□□□□ -2.04
Ccdc87Q8CDL9 Mir146-201ENSMUST00000083667 65 ntBASIC2.3□□□□□ -2.04
Ccdc87Q8CDL9 Gm14405-201ENSMUST00000117808 2330 ntBASIC2.3□□□□□ -2.04
Ccdc87Q8CDL9 Gm13560-201ENSMUST00000121865 329 ntBASIC2.29□□□□□ -2.04
Ccdc87Q8CDL9 Gm24595-201ENSMUST00000122501 110 ntBASIC2.29□□□□□ -2.04
Ccdc87Q8CDL9 Gm26482-201ENSMUST00000158015 62 ntBASIC2.29□□□□□ -2.04
Ccdc87Q8CDL9 Gm22767-201ENSMUST00000158365 165 ntBASIC2.29□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 298.9 ms