Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Gm25274-201ENSMUST00000104296 135 ntBASIC0.37□□□□□ -2.35
Trub1Q8C0D0 Gm25378-201ENSMUST00000104333 129 ntBASIC0.37□□□□□ -2.35
Trub1Q8C0D0 Gm12068-201ENSMUST00000153153 376 ntTSL 3 BASIC0.37□□□□□ -2.35
Trub1Q8C0D0 Gm26484-201ENSMUST00000158018 106 ntBASIC0.37□□□□□ -2.35
Trub1Q8C0D0 Mir6394-201ENSMUST00000184738 99 ntBASIC0.37□□□□□ -2.35
Trub1Q8C0D0 Gm19777-201ENSMUST00000191940 358 ntBASIC0.37□□□□□ -2.35
Trub1Q8C0D0 Gm45704-201ENSMUST00000212582 403 ntBASIC0.37□□□□□ -2.35
Trub1Q8C0D0 AC110380.1-201ENSMUST00000226987 389 ntBASIC0.37□□□□□ -2.35
Trub1Q8C0D0 AC114916.1-201ENSMUST00000228465 494 ntBASIC0.37□□□□□ -2.35
Trub1Q8C0D0 mt-Atp6-201ENSMUST00000082408 681 ntAPPRIS P1 BASIC0.37□□□□□ -2.35
Trub1Q8C0D0 AC160115.1-201ENSMUST00000224678 1574 ntBASIC0.36□□□□□ -2.35
Trub1Q8C0D0 Gm5581-201ENSMUST00000072940 2550 ntBASIC0.36□□□□□ -2.35
Trub1Q8C0D0 Mir654-201ENSMUST00000104787 84 ntBASIC0.36□□□□□ -2.35
Trub1Q8C0D0 Gm11386-201ENSMUST00000117761 347 ntBASIC0.36□□□□□ -2.35
Trub1Q8C0D0 AI847159-201ENSMUST00000137728 305 ntTSL 2 BASIC0.36□□□□□ -2.35
Trub1Q8C0D0 Gm25968-201ENSMUST00000157167 100 ntBASIC0.36□□□□□ -2.35
Trub1Q8C0D0 1700129C05Rik-203ENSMUST00000162271 325 ntAPPRIS ALT2 TSL 3 BASIC0.36□□□□□ -2.35
Trub1Q8C0D0 Gm27289-201ENSMUST00000183341 82 ntBASIC0.36□□□□□ -2.35
Trub1Q8C0D0 Gm45119-201ENSMUST00000207612 199 ntBASIC0.36□□□□□ -2.35
Trub1Q8C0D0 Gm26135-201ENSMUST00000101993 72 ntBASIC0.35□□□□□ -2.35
Trub1Q8C0D0 Trbv17-201ENSMUST00000103275 374 ntAPPRIS P1 BASIC0.35□□□□□ -2.35
Trub1Q8C0D0 Trgj3-201ENSMUST00000103562 60 ntAPPRIS P1 BASIC0.35□□□□□ -2.35
Trub1Q8C0D0 Gm14293-201ENSMUST00000118528 577 ntBASIC0.35□□□□□ -2.35
Trub1Q8C0D0 Gm16032-201ENSMUST00000118534 168 ntBASIC0.35□□□□□ -2.35
Trub1Q8C0D0 Gm14884-201ENSMUST00000120456 196 ntBASIC0.35□□□□□ -2.35
Trub1Q8C0D0 Gm15632-201ENSMUST00000135936 246 ntTSL 1 (best) BASIC0.35□□□□□ -2.35
Trub1Q8C0D0 Gm25825-201ENSMUST00000157091 124 ntBASIC0.35□□□□□ -2.35
Trub1Q8C0D0 Gm22888-201ENSMUST00000158640 77 ntBASIC0.35□□□□□ -2.35
Trub1Q8C0D0 Mir1961-201ENSMUST00000158643 112 ntBASIC0.35□□□□□ -2.35
Trub1Q8C0D0 Gm10717-205ENSMUST00000177601 645 ntAPPRIS ALT2 TSL 5 BASIC0.35□□□□□ -2.35
Trub1Q8C0D0 Gm26285-201ENSMUST00000177923 107 ntBASIC0.35□□□□□ -2.35
Trub1Q8C0D0 Snord50b-201ENSMUST00000178497 72 ntBASIC0.35□□□□□ -2.35
Trub1Q8C0D0 Gm21060-201ENSMUST00000179346 168 ntAPPRIS P1 BASIC0.35□□□□□ -2.35
Trub1Q8C0D0 Mir6985-201ENSMUST00000184641 61 ntBASIC0.35□□□□□ -2.35
Trub1Q8C0D0 Gm18291-201ENSMUST00000190791 301 ntBASIC0.35□□□□□ -2.35
Trub1Q8C0D0 Gm28288-201ENSMUST00000191019 214 ntBASIC0.35□□□□□ -2.35
Trub1Q8C0D0 Gm44828-201ENSMUST00000203745 106 ntBASIC0.35□□□□□ -2.35
Trub1Q8C0D0 Olfr1435-ps1-201ENSMUST00000207773 249 ntBASIC0.35□□□□□ -2.35
Trub1Q8C0D0 2210407C18Rik-201ENSMUST00000048801 876 ntAPPRIS P1 TSL 1 (best) BASIC0.35□□□□□ -2.35
Trub1Q8C0D0 Gm23622-201ENSMUST00000082460 107 ntBASIC0.35□□□□□ -2.35
Trub1Q8C0D0 Gm22809-201ENSMUST00000082743 156 ntBASIC0.35□□□□□ -2.35
Trub1Q8C0D0 Gm23969-201ENSMUST00000083324 74 ntBASIC0.35□□□□□ -2.35
Trub1Q8C0D0 Gm23097-201ENSMUST00000083448 105 ntBASIC0.35□□□□□ -2.35
Trub1Q8C0D0 Gm24283-201ENSMUST00000104233 107 ntBASIC0.34□□□□□ -2.36
Trub1Q8C0D0 Gm25102-201ENSMUST00000122479 112 ntBASIC0.34□□□□□ -2.36
Trub1Q8C0D0 Gm25783-201ENSMUST00000122525 190 ntBASIC0.34□□□□□ -2.36
Trub1Q8C0D0 Gm25052-201ENSMUST00000122661 158 ntBASIC0.34□□□□□ -2.36
Trub1Q8C0D0 Gm15899-201ENSMUST00000128586 238 ntBASIC0.34□□□□□ -2.36
Trub1Q8C0D0 Obox4-ps37-201ENSMUST00000177223 276 ntBASIC0.34□□□□□ -2.36
Trub1Q8C0D0 Gm29640-201ENSMUST00000187972 278 ntBASIC0.34□□□□□ -2.36
Trub1Q8C0D0 AC122905.2-201ENSMUST00000220325 269 ntBASIC0.34□□□□□ -2.36
Trub1Q8C0D0 AC116589.1-201ENSMUST00000220634 327 ntBASIC0.34□□□□□ -2.36
Trub1Q8C0D0 AC122298.1-201ENSMUST00000222574 165 ntTSL 5 BASIC0.34□□□□□ -2.36
Trub1Q8C0D0 Olfr1154-203ENSMUST00000215862 2624 ntAPPRIS P1 TSL 5 BASIC0.33□□□□□ -2.36
Trub1Q8C0D0 Gm22149-201ENSMUST00000104442 136 ntBASIC0.33□□□□□ -2.36
Trub1Q8C0D0 Gm26303-201ENSMUST00000116845 119 ntBASIC0.33□□□□□ -2.36
Trub1Q8C0D0 Gm14491-201ENSMUST00000121919 199 ntBASIC0.33□□□□□ -2.36
Trub1Q8C0D0 4930579O11Rik-202ENSMUST00000168243 672 ntTSL 3 BASIC0.33□□□□□ -2.36
Trub1Q8C0D0 Mir3079-201ENSMUST00000175428 90 ntBASIC0.33□□□□□ -2.36
Trub1Q8C0D0 Mir7j-201ENSMUST00000184427 122 ntBASIC0.33□□□□□ -2.36
Trub1Q8C0D0 Gm28648-201ENSMUST00000190092 343 ntBASIC0.33□□□□□ -2.36
Trub1Q8C0D0 Gm44458-201ENSMUST00000196594 143 ntBASIC0.33□□□□□ -2.36
Trub1Q8C0D0 Gm44085-201ENSMUST00000205056 372 ntTSL 3 BASIC0.33□□□□□ -2.36
Trub1Q8C0D0 Olfr1139-ps1-201ENSMUST00000217634 168 ntBASIC0.33□□□□□ -2.36
Trub1Q8C0D0 AC116589.3-202ENSMUST00000221770 649 ntBASIC0.33□□□□□ -2.36
Trub1Q8C0D0 AC116589.6-201ENSMUST00000222252 649 ntBASIC0.33□□□□□ -2.36
Trub1Q8C0D0 Gm25909-201ENSMUST00000157619 121 ntBASIC0.32□□□□□ -2.36
Trub1Q8C0D0 Gm24853-201ENSMUST00000158026 121 ntBASIC0.32□□□□□ -2.36
Trub1Q8C0D0 BC050972-201ENSMUST00000168475 526 ntTSL 3 BASIC0.32□□□□□ -2.36
Trub1Q8C0D0 Gm27410-201ENSMUST00000183851 115 ntBASIC0.32□□□□□ -2.36
Trub1Q8C0D0 Gm28541-201ENSMUST00000185206 442 ntTSL 5 BASIC0.32□□□□□ -2.36
Trub1Q8C0D0 Gm28811-201ENSMUST00000190650 442 ntTSL 5 BASIC0.32□□□□□ -2.36
Trub1Q8C0D0 Gm37808-201ENSMUST00000192038 442 ntTSL 5 BASIC0.32□□□□□ -2.36
Trub1Q8C0D0 Gm9227-201ENSMUST00000194733 566 ntBASIC0.32□□□□□ -2.36
Trub1Q8C0D0 Gm44462-201ENSMUST00000199696 129 ntBASIC0.32□□□□□ -2.36
Trub1Q8C0D0 AC113441.1-201ENSMUST00000223464 134 ntBASIC0.32□□□□□ -2.36
Trub1Q8C0D0 Mir344-201ENSMUST00000083634 95 ntBASIC0.32□□□□□ -2.36
Trub1Q8C0D0 Gm22759-201ENSMUST00000102276 96 ntBASIC0.31□□□□□ -2.36
Trub1Q8C0D0 Gm11798-201ENSMUST00000119150 421 ntBASIC0.31□□□□□ -2.36
Trub1Q8C0D0 Vmn1r-ps116-201ENSMUST00000121544 292 ntBASIC0.31□□□□□ -2.36
Trub1Q8C0D0 Gm26152-201ENSMUST00000157427 101 ntBASIC0.31□□□□□ -2.36
Trub1Q8C0D0 Gm23660-201ENSMUST00000178362 79 ntBASIC0.31□□□□□ -2.36
Trub1Q8C0D0 Gm24088-201ENSMUST00000179100 79 ntBASIC0.31□□□□□ -2.36
Trub1Q8C0D0 Trgj4-201ENSMUST00000184430 61 ntAPPRIS P1 BASIC0.31□□□□□ -2.36
Trub1Q8C0D0 Gm29014-201ENSMUST00000191422 326 ntBASIC0.31□□□□□ -2.36
Trub1Q8C0D0 Gm38280-201ENSMUST00000192610 158 ntBASIC0.31□□□□□ -2.36
Trub1Q8C0D0 Mir324-201ENSMUST00000083600 89 ntBASIC0.31□□□□□ -2.36
Trub1Q8C0D0 Olfr790-203ENSMUST00000215067 2659 ntAPPRIS P1 TSL 5 BASIC0.3□□□□□ -2.36
Trub1Q8C0D0 Mir465b-1-201ENSMUST00000103940 79 ntBASIC0.3□□□□□ -2.36
Trub1Q8C0D0 Gm22656-201ENSMUST00000104199 171 ntBASIC0.3□□□□□ -2.36
Trub1Q8C0D0 Mir465b-2-201ENSMUST00000104662 79 ntBASIC0.3□□□□□ -2.36
Trub1Q8C0D0 Gm23232-201ENSMUST00000157300 105 ntBASIC0.3□□□□□ -2.36
Trub1Q8C0D0 Gm26393-201ENSMUST00000157625 129 ntBASIC0.3□□□□□ -2.36
Trub1Q8C0D0 Gm16546-201ENSMUST00000159442 355 ntBASIC0.3□□□□□ -2.36
Trub1Q8C0D0 Gm25949-201ENSMUST00000175333 114 ntBASIC0.3□□□□□ -2.36
Trub1Q8C0D0 Mir6905-201ENSMUST00000184228 70 ntBASIC0.3□□□□□ -2.36
Trub1Q8C0D0 Gm42988-201ENSMUST00000198116 225 ntBASIC0.3□□□□□ -2.36
Trub1Q8C0D0 Gm44948-201ENSMUST00000209050 149 ntBASIC0.3□□□□□ -2.36
Trub1Q8C0D0 Gm45543-201ENSMUST00000209327 88 ntBASIC0.3□□□□□ -2.36
Trub1Q8C0D0 AC126554.1-201ENSMUST00000222161 271 ntBASIC0.3□□□□□ -2.36
Retrieved 100 of 76,532 protein–RNA pairs in 256.3 ms