Protein–RNA interactions for Protein: Q8BX13

Ube3d, E3 ubiquitin-protein ligase E3D, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3dQ8BX13 Gm24474-201ENSMUST00000220504 469 ntTSL 2 BASIC2.53□□□□□ -2
Ube3dQ8BX13 Muc16-204ENSMUST00000208663 25437 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Ube3dQ8BX13 Pak3-203ENSMUST00000112864 8612 ntAPPRIS P3 TSL 1 (best) BASIC2.53□□□□□ -2
Ube3dQ8BX13 Vmn1r185-204ENSMUST00000227411 4928 ntAPPRIS P1 BASIC2.53□□□□□ -2
Ube3dQ8BX13 Gm43540-201ENSMUST00000196320 3848 ntBASIC2.53□□□□□ -2
Ube3dQ8BX13 Gm6377-201ENSMUST00000060013 2793 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
Ube3dQ8BX13 Gm38706-201ENSMUST00000182397 2617 ntBASIC2.52□□□□□ -2.01
Ube3dQ8BX13 Traj30-201ENSMUST00000103711 59 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Ube3dQ8BX13 Traj20-201ENSMUST00000103721 58 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Ube3dQ8BX13 Gm13200-201ENSMUST00000138802 258 ntTSL 3 BASIC2.52□□□□□ -2.01
Ube3dQ8BX13 Gm22163-201ENSMUST00000158408 135 ntBASIC2.52□□□□□ -2.01
Ube3dQ8BX13 Gm22858-201ENSMUST00000174972 76 ntBASIC2.52□□□□□ -2.01
Ube3dQ8BX13 Gm27330-201ENSMUST00000184689 132 ntBASIC2.52□□□□□ -2.01
Ube3dQ8BX13 Ighv1-1-201ENSMUST00000194912 291 ntBASIC2.52□□□□□ -2.01
Ube3dQ8BX13 Gm42719-201ENSMUST00000197393 355 ntBASIC2.52□□□□□ -2.01
Ube3dQ8BX13 Gm43381-201ENSMUST00000198553 165 ntBASIC2.52□□□□□ -2.01
Ube3dQ8BX13 Gm44578-201ENSMUST00000207236 3835 ntBASIC2.52□□□□□ -2.01
Ube3dQ8BX13 Gm8219-201ENSMUST00000218309 242 ntBASIC2.52□□□□□ -2.01
Ube3dQ8BX13 Snord61-201ENSMUST00000083176 71 ntBASIC2.52□□□□□ -2.01
Ube3dQ8BX13 Mir201-201ENSMUST00000083470 66 ntBASIC2.52□□□□□ -2.01
Ube3dQ8BX13 Gm23847-201ENSMUST00000083829 110 ntBASIC2.52□□□□□ -2.01
Ube3dQ8BX13 Gm22681-201ENSMUST00000083853 106 ntBASIC2.52□□□□□ -2.01
Ube3dQ8BX13 Gm24449-201ENSMUST00000083985 106 ntBASIC2.52□□□□□ -2.01
Ube3dQ8BX13 Vmn2r65-201ENSMUST00000044583 2538 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Ube3dQ8BX13 Gm8935-201ENSMUST00000066794 2798 ntBASIC2.52□□□□□ -2.01
Ube3dQ8BX13 Gm43032-201ENSMUST00000197967 3123 ntBASIC2.52□□□□□ -2.01
Ube3dQ8BX13 Olfr1044-202ENSMUST00000215171 3266 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Ube3dQ8BX13 Traj43-201ENSMUST00000103699 57 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
Ube3dQ8BX13 Gm22768-201ENSMUST00000158366 153 ntBASIC2.51□□□□□ -2.01
Ube3dQ8BX13 Mir3965-201ENSMUST00000175570 69 ntBASIC2.51□□□□□ -2.01
Ube3dQ8BX13 Gm44358-201ENSMUST00000196301 98 ntBASIC2.51□□□□□ -2.01
Ube3dQ8BX13 Gm43521-201ENSMUST00000197838 255 ntBASIC2.51□□□□□ -2.01
Ube3dQ8BX13 Gm43107-201ENSMUST00000198729 255 ntBASIC2.51□□□□□ -2.01
Ube3dQ8BX13 Gm45791-201ENSMUST00000212908 352 ntBASIC2.51□□□□□ -2.01
Ube3dQ8BX13 Gm24461-201ENSMUST00000082735 103 ntBASIC2.51□□□□□ -2.01
Ube3dQ8BX13 Mir429-201ENSMUST00000083493 83 ntBASIC2.51□□□□□ -2.01
Ube3dQ8BX13 Uty-201ENSMUST00000069309 5208 ntAPPRIS P3 TSL 1 (best) BASIC2.51□□□□□ -2.01
Ube3dQ8BX13 Gpr174-201ENSMUST00000101294 4614 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
Ube3dQ8BX13 AC154386.1-201ENSMUST00000222753 2871 ntBASIC2.51□□□□□ -2.01
Ube3dQ8BX13 Vmn1r185-202ENSMUST00000226694 5656 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
Ube3dQ8BX13 Gm24171-201ENSMUST00000104126 131 ntBASIC2.5□□□□□ -2.01
Ube3dQ8BX13 Gm25882-201ENSMUST00000157784 85 ntBASIC2.5□□□□□ -2.01
Ube3dQ8BX13 Gm24958-201ENSMUST00000158009 97 ntBASIC2.5□□□□□ -2.01
Ube3dQ8BX13 Mir7039-201ENSMUST00000183852 85 ntBASIC2.5□□□□□ -2.01
Ube3dQ8BX13 Gm19257-201ENSMUST00000186121 183 ntBASIC2.5□□□□□ -2.01
Ube3dQ8BX13 AC167721.1-201ENSMUST00000217088 279 ntBASIC2.5□□□□□ -2.01
Ube3dQ8BX13 Gm7214-201ENSMUST00000222428 272 ntBASIC2.5□□□□□ -2.01
Ube3dQ8BX13 Hmgb1l-201ENSMUST00000082150 571 ntBASIC2.5□□□□□ -2.01
Ube3dQ8BX13 Mir34a-201ENSMUST00000083559 102 ntBASIC2.5□□□□□ -2.01
Ube3dQ8BX13 Gm25627-201ENSMUST00000084003 153 ntBASIC2.5□□□□□ -2.01
Ube3dQ8BX13 Olfr896-ps1-202ENSMUST00000215219 2878 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
Ube3dQ8BX13 Mir542-201ENSMUST00000102186 85 ntBASIC2.49□□□□□ -2.01
Ube3dQ8BX13 Gm26011-201ENSMUST00000104410 104 ntBASIC2.49□□□□□ -2.01
Ube3dQ8BX13 Tnfaip8-206ENSMUST00000145726 632 ntTSL 3 BASIC2.49□□□□□ -2.01
Ube3dQ8BX13 Gm24717-201ENSMUST00000157522 124 ntBASIC2.49□□□□□ -2.01
Ube3dQ8BX13 Gm22416-201ENSMUST00000158590 88 ntBASIC2.49□□□□□ -2.01
Ube3dQ8BX13 Gm25119-201ENSMUST00000158815 88 ntBASIC2.49□□□□□ -2.01
Ube3dQ8BX13 Mir7081-201ENSMUST00000184490 75 ntBASIC2.49□□□□□ -2.01
Ube3dQ8BX13 Mir6916-201ENSMUST00000184514 63 ntBASIC2.49□□□□□ -2.01
Ube3dQ8BX13 Gm9967-203ENSMUST00000206903 408 ntTSL 3 BASIC2.49□□□□□ -2.01
Ube3dQ8BX13 Olfr623-202ENSMUST00000213840 3980 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
Ube3dQ8BX13 Gm37664-201ENSMUST00000194607 3813 ntBASIC2.49□□□□□ -2.01
Ube3dQ8BX13 Stap1-206ENSMUST00000198435 3350 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
Ube3dQ8BX13 Olfr1193-202ENSMUST00000213893 3519 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
Ube3dQ8BX13 Gm45104-201ENSMUST00000208748 4350 ntBASIC2.48□□□□□ -2.01
Ube3dQ8BX13 Gm22782-201ENSMUST00000104082 132 ntBASIC2.48□□□□□ -2.01
Ube3dQ8BX13 Gm23911-201ENSMUST00000104596 134 ntBASIC2.48□□□□□ -2.01
Ube3dQ8BX13 Gm26473-201ENSMUST00000116763 127 ntBASIC2.48□□□□□ -2.01
Ube3dQ8BX13 Gm11644-201ENSMUST00000119735 150 ntBASIC2.48□□□□□ -2.01
Ube3dQ8BX13 Gm24559-201ENSMUST00000157519 121 ntBASIC2.48□□□□□ -2.01
Ube3dQ8BX13 Gm24747-201ENSMUST00000157835 87 ntBASIC2.48□□□□□ -2.01
Ube3dQ8BX13 Gm24333-201ENSMUST00000175101 84 ntBASIC2.48□□□□□ -2.01
Ube3dQ8BX13 Gm23567-201ENSMUST00000178005 107 ntBASIC2.48□□□□□ -2.01
Ube3dQ8BX13 Mir6386-201ENSMUST00000183558 104 ntBASIC2.48□□□□□ -2.01
Ube3dQ8BX13 Gm28669-201ENSMUST00000188400 100 ntBASIC2.48□□□□□ -2.01
Ube3dQ8BX13 Gm36551-201ENSMUST00000196787 300 ntTSL 5 BASIC2.48□□□□□ -2.01
Ube3dQ8BX13 AC168266.1-201ENSMUST00000216024 226 ntBASIC2.48□□□□□ -2.01
Ube3dQ8BX13 Gm24705-201ENSMUST00000082808 107 ntBASIC2.48□□□□□ -2.01
Ube3dQ8BX13 Gm24410-201ENSMUST00000083433 107 ntBASIC2.48□□□□□ -2.01
Ube3dQ8BX13 Olfr1240-202ENSMUST00000216123 4603 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
Ube3dQ8BX13 Tlr3-201ENSMUST00000034056 4407 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
Ube3dQ8BX13 Atp11c-205ENSMUST00000154051 6039 ntTSL 5 BASIC2.48□□□□□ -2.01
Ube3dQ8BX13 Olfr65-203ENSMUST00000214300 2855 ntAPPRIS ALT1 TSL 5 BASIC2.47□□□□□ -2.01
Ube3dQ8BX13 Gm23325-201ENSMUST00000157422 129 ntBASIC2.47□□□□□ -2.01
Ube3dQ8BX13 Gm24851-201ENSMUST00000158028 103 ntBASIC2.47□□□□□ -2.01
Ube3dQ8BX13 Gm25558-201ENSMUST00000158083 106 ntBASIC2.47□□□□□ -2.01
Ube3dQ8BX13 Gm26406-201ENSMUST00000158503 124 ntBASIC2.47□□□□□ -2.01
Ube3dQ8BX13 Gm19855-201ENSMUST00000210145 249 ntBASIC2.47□□□□□ -2.01
Ube3dQ8BX13 AC163289.1-201ENSMUST00000215919 262 ntBASIC2.47□□□□□ -2.01
Ube3dQ8BX13 Gm37928-201ENSMUST00000193265 4131 ntBASIC2.47□□□□□ -2.01
Ube3dQ8BX13 Mir499-201ENSMUST00000102357 79 ntBASIC2.46□□□□□ -2.02
Ube3dQ8BX13 Gm26074-201ENSMUST00000104063 129 ntBASIC2.46□□□□□ -2.02
Ube3dQ8BX13 Gm26341-201ENSMUST00000104561 134 ntBASIC2.46□□□□□ -2.02
Ube3dQ8BX13 Gm22141-201ENSMUST00000157403 277 ntBASIC2.46□□□□□ -2.02
Ube3dQ8BX13 Gm23268-201ENSMUST00000175494 78 ntBASIC2.46□□□□□ -2.02
Ube3dQ8BX13 Slitrk6-201ENSMUST00000078386 4240 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
Ube3dQ8BX13 Olfr592-202ENSMUST00000106893 6566 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
Ube3dQ8BX13 Vmn1r185-211ENSMUST00000228467 6915 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
Ube3dQ8BX13 Gm13136-201ENSMUST00000121031 2950 ntBASIC2.46□□□□□ -2.02
Ube3dQ8BX13 Olfr307-202ENSMUST00000213705 4498 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
Retrieved 100 of 76,532 protein–RNA pairs in 166.4 ms