Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Trbv18-201ENSMUST00000194256 294 ntBASIC3.26□□□□□ -1.89
Usp40Q8BWR4 Ifi203-202ENSMUST00000081216 3610 ntAPPRIS P3 TSL 1 (best) BASIC3.26□□□□□ -1.89
Usp40Q8BWR4 Slc16a7-206ENSMUST00000211781 10981 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
Usp40Q8BWR4 Gm23907-201ENSMUST00000104595 189 ntBASIC3.25□□□□□ -1.89
Usp40Q8BWR4 Gm12351-201ENSMUST00000118727 292 ntBASIC3.25□□□□□ -1.89
Usp40Q8BWR4 Gm22560-201ENSMUST00000157332 120 ntBASIC3.25□□□□□ -1.89
Usp40Q8BWR4 Snord50a-201ENSMUST00000178154 72 ntBASIC3.25□□□□□ -1.89
Usp40Q8BWR4 Gm24463-201ENSMUST00000178417 72 ntBASIC3.25□□□□□ -1.89
Usp40Q8BWR4 Gm29535-201ENSMUST00000185723 109 ntBASIC3.25□□□□□ -1.89
Usp40Q8BWR4 Gm28825-201ENSMUST00000186233 238 ntBASIC3.25□□□□□ -1.89
Usp40Q8BWR4 Gm28143-201ENSMUST00000191082 109 ntBASIC3.25□□□□□ -1.89
Usp40Q8BWR4 Zfp985-201ENSMUST00000081742 2762 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
Usp40Q8BWR4 Spata31-201ENSMUST00000070216 3232 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
Usp40Q8BWR4 Olfr1245-202ENSMUST00000217402 2610 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Usp40Q8BWR4 Vmn2r70-201ENSMUST00000168230 2565 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Usp40Q8BWR4 Gm15214-201ENSMUST00000122155 470 ntBASIC3.24□□□□□ -1.89
Usp40Q8BWR4 Gm20438-201ENSMUST00000174441 329 ntBASIC3.24□□□□□ -1.89
Usp40Q8BWR4 Gm37116-201ENSMUST00000195161 147 ntBASIC3.24□□□□□ -1.89
Usp40Q8BWR4 Gm44308-201ENSMUST00000197080 99 ntBASIC3.24□□□□□ -1.89
Usp40Q8BWR4 Gm44903-201ENSMUST00000206840 130 ntBASIC3.24□□□□□ -1.89
Usp40Q8BWR4 A930027P06Rik-201ENSMUST00000221298 2975 ntBASIC3.24□□□□□ -1.89
Usp40Q8BWR4 AC134596.2-201ENSMUST00000222158 171 ntBASIC3.24□□□□□ -1.89
Usp40Q8BWR4 Vmn1r29-203ENSMUST00000227761 4671 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
Usp40Q8BWR4 Vmn1r29-205ENSMUST00000228909 4658 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
Usp40Q8BWR4 Gm6030-201ENSMUST00000078768 402 ntBASIC3.24□□□□□ -1.89
Usp40Q8BWR4 Gpr174-201ENSMUST00000101294 4614 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Usp40Q8BWR4 Gm44177-201ENSMUST00000204338 2667 ntBASIC3.24□□□□□ -1.89
Usp40Q8BWR4 Zfp616-205ENSMUST00000178159 2964 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Usp40Q8BWR4 Gm22031-201ENSMUST00000116945 126 ntBASIC3.23□□□□□ -1.89
Usp40Q8BWR4 Il23r-201ENSMUST00000118364 2488 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Usp40Q8BWR4 Gm15536-201ENSMUST00000121411 114 ntBASIC3.23□□□□□ -1.89
Usp40Q8BWR4 Gm24937-201ENSMUST00000122597 134 ntBASIC3.23□□□□□ -1.89
Usp40Q8BWR4 Gm22517-201ENSMUST00000158265 136 ntBASIC3.23□□□□□ -1.89
Usp40Q8BWR4 Gm22946-201ENSMUST00000158558 82 ntBASIC3.23□□□□□ -1.89
Usp40Q8BWR4 Gm23005-201ENSMUST00000158950 136 ntBASIC3.23□□□□□ -1.89
Usp40Q8BWR4 Gm27672-201ENSMUST00000183751 204 ntBASIC3.23□□□□□ -1.89
Usp40Q8BWR4 Gm37377-201ENSMUST00000191733 304 ntBASIC3.23□□□□□ -1.89
Usp40Q8BWR4 Gm37146-201ENSMUST00000192572 463 ntTSL 3 BASIC3.23□□□□□ -1.89
Usp40Q8BWR4 Igkv14-118-1-201ENSMUST00000198645 334 ntBASIC3.23□□□□□ -1.89
Usp40Q8BWR4 Gm18000-201ENSMUST00000212153 800 ntBASIC3.23□□□□□ -1.89
Usp40Q8BWR4 Gm31025-201ENSMUST00000222553 482 ntTSL 5 BASIC3.23□□□□□ -1.89
Usp40Q8BWR4 Vmn1r75-206ENSMUST00000228463 6508 ntAPPRIS P2 BASIC3.23□□□□□ -1.89
Usp40Q8BWR4 Mir208a-201ENSMUST00000083498 83 ntBASIC3.23□□□□□ -1.89
Usp40Q8BWR4 Olfr1225-202ENSMUST00000216961 3231 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Usp40Q8BWR4 Gm42448-201ENSMUST00000197122 2644 ntBASIC3.22□□□□□ -1.89
Usp40Q8BWR4 Gm14602-201ENSMUST00000118625 340 ntBASIC3.22□□□□□ -1.89
Usp40Q8BWR4 Gm14843-201ENSMUST00000119596 212 ntBASIC3.22□□□□□ -1.89
Usp40Q8BWR4 Gm23589-201ENSMUST00000157660 105 ntBASIC3.22□□□□□ -1.89
Usp40Q8BWR4 Gm22708-201ENSMUST00000158987 103 ntBASIC3.22□□□□□ -1.89
Usp40Q8BWR4 Gm27869-201ENSMUST00000184327 122 ntBASIC3.22□□□□□ -1.89
Usp40Q8BWR4 Gm37918-201ENSMUST00000192071 120 ntBASIC3.22□□□□□ -1.89
Usp40Q8BWR4 Gm37281-201ENSMUST00000192412 439 ntBASIC3.22□□□□□ -1.89
Usp40Q8BWR4 CT571266.1-201ENSMUST00000222859 153 ntBASIC3.22□□□□□ -1.89
Usp40Q8BWR4 Olfr218-202ENSMUST00000215844 3410 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Usp40Q8BWR4 AC153967.1-201ENSMUST00000219333 3190 ntBASIC3.21□□□□□ -1.9
Usp40Q8BWR4 Mir1936-201ENSMUST00000158699 93 ntBASIC3.21□□□□□ -1.9
Usp40Q8BWR4 Gm22510-201ENSMUST00000179304 79 ntBASIC3.21□□□□□ -1.9
Usp40Q8BWR4 Gm26336-201ENSMUST00000179449 79 ntBASIC3.21□□□□□ -1.9
Usp40Q8BWR4 Gm26390-201ENSMUST00000179628 79 ntBASIC3.21□□□□□ -1.9
Usp40Q8BWR4 Gm42891-201ENSMUST00000199340 281 ntTSL 5 BASIC3.21□□□□□ -1.9
Usp40Q8BWR4 Gm43239-201ENSMUST00000200131 201 ntBASIC3.21□□□□□ -1.9
Usp40Q8BWR4 Gm45791-201ENSMUST00000212908 352 ntBASIC3.21□□□□□ -1.9
Usp40Q8BWR4 Gm8219-201ENSMUST00000218309 242 ntBASIC3.21□□□□□ -1.9
Usp40Q8BWR4 AC132384.11-201ENSMUST00000219676 178 ntBASIC3.21□□□□□ -1.9
Usp40Q8BWR4 Olfr594-202ENSMUST00000214051 2809 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Usp40Q8BWR4 Olfr878-203ENSMUST00000214263 4003 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Usp40Q8BWR4 Gm25728-201ENSMUST00000104525 159 ntBASIC3.2□□□□□ -1.9
Usp40Q8BWR4 Gm23183-201ENSMUST00000122595 323 ntBASIC3.2□□□□□ -1.9
Usp40Q8BWR4 Gm23886-201ENSMUST00000122684 313 ntBASIC3.2□□□□□ -1.9
Usp40Q8BWR4 Gm27934-201ENSMUST00000158795 63 ntBASIC3.2□□□□□ -1.9
Usp40Q8BWR4 Mir7039-201ENSMUST00000183852 85 ntBASIC3.2□□□□□ -1.9
Usp40Q8BWR4 Mir6371-201ENSMUST00000184470 111 ntBASIC3.2□□□□□ -1.9
Usp40Q8BWR4 Gm22686-201ENSMUST00000082847 100 ntBASIC3.2□□□□□ -1.9
Usp40Q8BWR4 Mir137-201ENSMUST00000083635 73 ntBASIC3.2□□□□□ -1.9
Usp40Q8BWR4 Mir218-1-201ENSMUST00000083669 110 ntBASIC3.2□□□□□ -1.9
Usp40Q8BWR4 Gm26168-201ENSMUST00000083787 112 ntBASIC3.2□□□□□ -1.9
Usp40Q8BWR4 Pak3-205ENSMUST00000112868 8163 ntAPPRIS P3 TSL 5 BASIC3.2□□□□□ -1.9
Usp40Q8BWR4 Vmn2r68-201ENSMUST00000061074 2556 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Usp40Q8BWR4 Cd209e-201ENSMUST00000033888 1802 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Usp40Q8BWR4 Trdj2-201ENSMUST00000103683 59 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Usp40Q8BWR4 Gm14491-201ENSMUST00000121919 199 ntBASIC3.19□□□□□ -1.9
Usp40Q8BWR4 Gm16265-201ENSMUST00000134558 108 ntBASIC3.19□□□□□ -1.9
Usp40Q8BWR4 Gm22515-201ENSMUST00000158273 305 ntBASIC3.19□□□□□ -1.9
Usp40Q8BWR4 Ighv1-78-201ENSMUST00000163670 294 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Usp40Q8BWR4 Gm27959-201ENSMUST00000185172 111 ntBASIC3.19□□□□□ -1.9
Usp40Q8BWR4 mt-Tv-201ENSMUST00000082389 69 ntBASIC3.19□□□□□ -1.9
Usp40Q8BWR4 Gm22443-201ENSMUST00000082890 107 ntBASIC3.19□□□□□ -1.9
Usp40Q8BWR4 Gm25681-201ENSMUST00000083938 106 ntBASIC3.19□□□□□ -1.9
Usp40Q8BWR4 Olfr298-204ENSMUST00000217110 3549 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Usp40Q8BWR4 AC125374.3-201ENSMUST00000214983 2810 ntBASIC3.19□□□□□ -1.9
Usp40Q8BWR4 Zbtb37-203ENSMUST00000162226 18814 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Usp40Q8BWR4 Ifi203-205ENSMUST00000129829 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
Usp40Q8BWR4 Olfr606-202ENSMUST00000214631 2649 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Usp40Q8BWR4 Gm14923-201ENSMUST00000118270 155 ntBASIC3.18□□□□□ -1.9
Usp40Q8BWR4 Gm25544-201ENSMUST00000122676 120 ntBASIC3.18□□□□□ -1.9
Usp40Q8BWR4 Gm23718-201ENSMUST00000157350 307 ntBASIC3.18□□□□□ -1.9
Usp40Q8BWR4 Gm22483-201ENSMUST00000157986 274 ntBASIC3.18□□□□□ -1.9
Usp40Q8BWR4 Gm24056-201ENSMUST00000158617 146 ntBASIC3.18□□□□□ -1.9
Usp40Q8BWR4 Gm16584-201ENSMUST00000159267 189 ntBASIC3.18□□□□□ -1.9
Usp40Q8BWR4 Trav7-6-202ENSMUST00000184687 275 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 137.9 ms