Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Gm7958-201ENSMUST00000178255 468 ntBASIC0.59□□□□□ -2.31
Clrn3Q8BHH8 Gm7950-201ENSMUST00000179633 468 ntBASIC0.59□□□□□ -2.31
Clrn3Q8BHH8 Gm14598-201ENSMUST00000180109 468 ntBASIC0.59□□□□□ -2.31
Clrn3Q8BHH8 Gm14625-201ENSMUST00000180231 468 ntBASIC0.59□□□□□ -2.31
Clrn3Q8BHH8 Gm20257-202ENSMUST00000188643 130 ntBASIC0.59□□□□□ -2.31
Clrn3Q8BHH8 Olfr1070-ps1-201ENSMUST00000215939 388 ntBASIC0.59□□□□□ -2.31
Clrn3Q8BHH8 Gm24035-201ENSMUST00000082867 107 ntBASIC0.59□□□□□ -2.31
Clrn3Q8BHH8 Mir101a-201ENSMUST00000083517 83 ntBASIC0.59□□□□□ -2.31
Clrn3Q8BHH8 Mir410-201ENSMUST00000083563 81 ntBASIC0.59□□□□□ -2.31
Clrn3Q8BHH8 Mir324-201ENSMUST00000083600 89 ntBASIC0.59□□□□□ -2.31
Clrn3Q8BHH8 Gm25627-201ENSMUST00000084003 153 ntBASIC0.59□□□□□ -2.31
Clrn3Q8BHH8 Olfr790-203ENSMUST00000215067 2659 ntAPPRIS P1 TSL 5 BASIC0.59□□□□□ -2.32
Clrn3Q8BHH8 Gm21897-201ENSMUST00000178312 1500 ntAPPRIS P1 BASIC0.59□□□□□ -2.32
Clrn3Q8BHH8 Gm23130-201ENSMUST00000104252 74 ntBASIC0.58□□□□□ -2.32
Clrn3Q8BHH8 Vmn1r-ps116-201ENSMUST00000121544 292 ntBASIC0.58□□□□□ -2.32
Clrn3Q8BHH8 Gm25825-201ENSMUST00000157091 124 ntBASIC0.58□□□□□ -2.32
Clrn3Q8BHH8 Gm24393-201ENSMUST00000158135 97 ntBASIC0.58□□□□□ -2.32
Clrn3Q8BHH8 Gm23355-201ENSMUST00000177614 107 ntBASIC0.58□□□□□ -2.32
Clrn3Q8BHH8 Gm19777-201ENSMUST00000191940 358 ntBASIC0.58□□□□□ -2.32
Clrn3Q8BHH8 1700112D23Rik-202ENSMUST00000193387 299 ntTSL 2 BASIC0.58□□□□□ -2.32
Clrn3Q8BHH8 Gm24920-201ENSMUST00000083018 85 ntBASIC0.58□□□□□ -2.32
Clrn3Q8BHH8 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC0.57□□□□□ -2.32
Clrn3Q8BHH8 Igkv13-84-201ENSMUST00000103339 347 ntAPPRIS P1 BASIC0.57□□□□□ -2.32
Clrn3Q8BHH8 Traj13-201ENSMUST00000103728 57 ntAPPRIS P1 BASIC0.57□□□□□ -2.32
Clrn3Q8BHH8 Gm11798-201ENSMUST00000119150 421 ntBASIC0.57□□□□□ -2.32
Clrn3Q8BHH8 Obox4-ps37-201ENSMUST00000177223 276 ntBASIC0.57□□□□□ -2.32
Clrn3Q8BHH8 Gm27365-201ENSMUST00000184041 177 ntBASIC0.57□□□□□ -2.32
Clrn3Q8BHH8 Gm43898-201ENSMUST00000204456 424 ntBASIC0.57□□□□□ -2.32
Clrn3Q8BHH8 Gm23340-201ENSMUST00000158955 123 ntBASIC0.56□□□□□ -2.32
Clrn3Q8BHH8 Mir6364-201ENSMUST00000183396 86 ntBASIC0.56□□□□□ -2.32
Clrn3Q8BHH8 Gm44473-201ENSMUST00000204039 152 ntBASIC0.56□□□□□ -2.32
Clrn3Q8BHH8 Klk1b28-ps-201ENSMUST00000206374 217 ntBASIC0.56□□□□□ -2.32
Clrn3Q8BHH8 Olfr1478-ps1-201ENSMUST00000208393 391 ntBASIC0.56□□□□□ -2.32
Clrn3Q8BHH8 Gm40604-202ENSMUST00000219541 522 ntTSL 5 BASIC0.56□□□□□ -2.32
Clrn3Q8BHH8 Mir34a-201ENSMUST00000083559 102 ntBASIC0.56□□□□□ -2.32
Clrn3Q8BHH8 Sycp1-ps1-201ENSMUST00000207882 2768 ntBASIC0.56□□□□□ -2.32
Clrn3Q8BHH8 Olfr790-202ENSMUST00000203966 2602 ntAPPRIS P1 TSL 5 BASIC0.55□□□□□ -2.32
Clrn3Q8BHH8 Gm24283-201ENSMUST00000104233 107 ntBASIC0.55□□□□□ -2.32
Clrn3Q8BHH8 Gm11856-201ENSMUST00000118712 276 ntBASIC0.55□□□□□ -2.32
Clrn3Q8BHH8 Mup-ps22-201ENSMUST00000121611 243 ntBASIC0.55□□□□□ -2.32
Clrn3Q8BHH8 Gm13565-201ENSMUST00000133596 700 ntTSL 1 (best) BASIC0.55□□□□□ -2.32
Clrn3Q8BHH8 1700047A11Rik-202ENSMUST00000153552 622 ntTSL 1 (best) BASIC0.55□□□□□ -2.32
Clrn3Q8BHH8 Snora24-201ENSMUST00000174989 130 ntBASIC0.55□□□□□ -2.32
Clrn3Q8BHH8 Gm24323-201ENSMUST00000175342 77 ntBASIC0.55□□□□□ -2.32
Clrn3Q8BHH8 Trgj4-201ENSMUST00000184430 61 ntAPPRIS P1 BASIC0.55□□□□□ -2.32
Clrn3Q8BHH8 Gm44465-201ENSMUST00000199536 114 ntBASIC0.55□□□□□ -2.32
Clrn3Q8BHH8 Gm44976-201ENSMUST00000205543 261 ntBASIC0.55□□□□□ -2.32
Clrn3Q8BHH8 4930598N05Rik-207ENSMUST00000208997 83 ntTSL 5 BASIC0.55□□□□□ -2.32
Clrn3Q8BHH8 Gm23614-201ENSMUST00000082598 107 ntBASIC0.55□□□□□ -2.32
Clrn3Q8BHH8 Gm14980-201ENSMUST00000121247 736 ntBASIC0.54□□□□□ -2.32
Clrn3Q8BHH8 Gm12770-201ENSMUST00000121734 462 ntBASIC0.54□□□□□ -2.32
Clrn3Q8BHH8 Gm22888-201ENSMUST00000158640 77 ntBASIC0.54□□□□□ -2.32
Clrn3Q8BHH8 Gm15446-203ENSMUST00000170826 192 ntTSL 5 BASIC0.54□□□□□ -2.32
Clrn3Q8BHH8 Mir3070a-201ENSMUST00000175468 89 ntBASIC0.54□□□□□ -2.32
Clrn3Q8BHH8 Gm27540-201ENSMUST00000184950 187 ntBASIC0.54□□□□□ -2.32
Clrn3Q8BHH8 AC098718.2-201ENSMUST00000226822 285 ntBASIC0.54□□□□□ -2.32
Clrn3Q8BHH8 Gm22294-201ENSMUST00000083308 104 ntBASIC0.54□□□□□ -2.32
Clrn3Q8BHH8 Mir19b-2-201ENSMUST00000083539 84 ntBASIC0.54□□□□□ -2.32
Clrn3Q8BHH8 Gm25783-201ENSMUST00000122525 190 ntBASIC0.53□□□□□ -2.32
Clrn3Q8BHH8 Gm23232-201ENSMUST00000157300 105 ntBASIC0.53□□□□□ -2.32
Clrn3Q8BHH8 Gm22215-201ENSMUST00000157558 96 ntBASIC0.53□□□□□ -2.32
Clrn3Q8BHH8 Mir1931-201ENSMUST00000158589 119 ntBASIC0.53□□□□□ -2.32
Clrn3Q8BHH8 Gm24678-201ENSMUST00000158756 104 ntBASIC0.53□□□□□ -2.32
Clrn3Q8BHH8 Gm23148-201ENSMUST00000180367 107 ntBASIC0.53□□□□□ -2.32
Clrn3Q8BHH8 Gm36956-201ENSMUST00000193830 214 ntBASIC0.53□□□□□ -2.32
Clrn3Q8BHH8 Gm34783-201ENSMUST00000209159 303 ntBASIC0.53□□□□□ -2.32
Clrn3Q8BHH8 Olfr865-ps1-201ENSMUST00000212071 85 ntBASIC0.53□□□□□ -2.32
Clrn3Q8BHH8 AC131720.2-201ENSMUST00000220420 431 ntBASIC0.53□□□□□ -2.32
Clrn3Q8BHH8 Gm22302-201ENSMUST00000082657 106 ntBASIC0.53□□□□□ -2.32
Clrn3Q8BHH8 Gm25258-201ENSMUST00000083049 107 ntBASIC0.53□□□□□ -2.32
Clrn3Q8BHH8 Snord33-201ENSMUST00000083694 84 ntBASIC0.53□□□□□ -2.32
Clrn3Q8BHH8 Gm23142-201ENSMUST00000101848 105 ntBASIC0.52□□□□□ -2.33
Clrn3Q8BHH8 Gm26240-201ENSMUST00000101893 105 ntBASIC0.52□□□□□ -2.33
Clrn3Q8BHH8 Gm25378-201ENSMUST00000104333 129 ntBASIC0.52□□□□□ -2.33
Clrn3Q8BHH8 Snord71-201ENSMUST00000104361 85 ntBASIC0.52□□□□□ -2.33
Clrn3Q8BHH8 Mir880-201ENSMUST00000104809 78 ntBASIC0.52□□□□□ -2.33
Clrn3Q8BHH8 Gm22796-201ENSMUST00000157234 106 ntBASIC0.52□□□□□ -2.33
Clrn3Q8BHH8 Gm25976-201ENSMUST00000158695 130 ntBASIC0.52□□□□□ -2.33
Clrn3Q8BHH8 Gm25838-201ENSMUST00000158920 120 ntBASIC0.52□□□□□ -2.33
Clrn3Q8BHH8 Vmn1r-ps31-201ENSMUST00000174112 238 ntBASIC0.52□□□□□ -2.33
Clrn3Q8BHH8 Gm22914-201ENSMUST00000175195 77 ntBASIC0.52□□□□□ -2.33
Clrn3Q8BHH8 4930555M17Rik-201ENSMUST00000176666 402 ntTSL 1 (best) BASIC0.52□□□□□ -2.33
Clrn3Q8BHH8 Gm21954-201ENSMUST00000179544 51 ntAPPRIS P1 TSL 5 BASIC0.52□□□□□ -2.33
Clrn3Q8BHH8 Mir6540-201ENSMUST00000184886 108 ntBASIC0.52□□□□□ -2.33
Clrn3Q8BHH8 Gm38060-201ENSMUST00000194822 464 ntBASIC0.52□□□□□ -2.33
Clrn3Q8BHH8 Gm23625-201ENSMUST00000082457 100 ntBASIC0.52□□□□□ -2.33
Clrn3Q8BHH8 Gm26329-201ENSMUST00000093723 110 ntBASIC0.52□□□□□ -2.33
Clrn3Q8BHH8 Mir654-201ENSMUST00000104787 84 ntBASIC0.51□□□□□ -2.33
Clrn3Q8BHH8 Sval2-202ENSMUST00000119995 463 ntTSL 3 BASIC0.51□□□□□ -2.33
Clrn3Q8BHH8 Gm22482-201ENSMUST00000122563 359 ntBASIC0.51□□□□□ -2.33
Clrn3Q8BHH8 Gm22598-201ENSMUST00000157600 127 ntBASIC0.51□□□□□ -2.33
Clrn3Q8BHH8 Gm22522-201ENSMUST00000158271 151 ntBASIC0.51□□□□□ -2.33
Clrn3Q8BHH8 Mir1961-201ENSMUST00000158643 112 ntBASIC0.51□□□□□ -2.33
Clrn3Q8BHH8 Gm25949-201ENSMUST00000175333 114 ntBASIC0.51□□□□□ -2.33
Clrn3Q8BHH8 Gm27539-201ENSMUST00000184971 224 ntBASIC0.51□□□□□ -2.33
Clrn3Q8BHH8 Gm43472-201ENSMUST00000200175 154 ntBASIC0.51□□□□□ -2.33
Clrn3Q8BHH8 Olfr277-ps1-201ENSMUST00000205749 285 ntBASIC0.51□□□□□ -2.33
Clrn3Q8BHH8 Gm24164-201ENSMUST00000093663 104 ntBASIC0.51□□□□□ -2.33
Clrn3Q8BHH8 Gm24116-201ENSMUST00000103975 107 ntBASIC0.5□□□□□ -2.33
Clrn3Q8BHH8 Gm22673-201ENSMUST00000104415 131 ntBASIC0.5□□□□□ -2.33
Retrieved 100 of 76,532 protein–RNA pairs in 79.1 ms