Protein–RNA interactions for Protein: Q80TE0

Rpap1, RNA polymerase II-associated protein 1, mousemouse

Predictions only

Length 1,409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap1Q80TE0 Mir6364-201ENSMUST00000183396 86 ntBASIC0.42□□□□□ -2.34
Rpap1Q80TE0 Gm28343-201ENSMUST00000185386 112 ntBASIC0.42□□□□□ -2.34
Rpap1Q80TE0 Gm43220-201ENSMUST00000199299 282 ntBASIC0.42□□□□□ -2.34
Rpap1Q80TE0 Gm20144-201ENSMUST00000203031 165 ntBASIC0.42□□□□□ -2.34
Rpap1Q80TE0 Stfa2l1-201ENSMUST00000079184 414 ntAPPRIS P1 TSL 1 (best) BASIC0.42□□□□□ -2.34
Rpap1Q80TE0 DQ267101-201ENSMUST00000082562 73 ntBASIC0.42□□□□□ -2.34
Rpap1Q80TE0 Gm24355-201ENSMUST00000082858 122 ntBASIC0.42□□□□□ -2.34
Rpap1Q80TE0 Snord33-201ENSMUST00000083694 84 ntBASIC0.42□□□□□ -2.34
Rpap1Q80TE0 Gm14296-202ENSMUST00000108931 750 ntBASIC0.41□□□□□ -2.34
Rpap1Q80TE0 Gm11859-201ENSMUST00000118099 455 ntBASIC0.41□□□□□ -2.34
Rpap1Q80TE0 Gm11794-201ENSMUST00000119446 237 ntBASIC0.41□□□□□ -2.34
Rpap1Q80TE0 Gm13596-201ENSMUST00000153354 292 ntTSL 5 BASIC0.41□□□□□ -2.34
Rpap1Q80TE0 Gm23542-201ENSMUST00000158208 96 ntBASIC0.41□□□□□ -2.34
Rpap1Q80TE0 Gm16577-201ENSMUST00000161579 471 ntTSL 3 BASIC0.41□□□□□ -2.34
Rpap1Q80TE0 2210418O10Rik-204ENSMUST00000166464 750 ntBASIC0.41□□□□□ -2.34
Rpap1Q80TE0 Gm17067-202ENSMUST00000180131 123 ntBASIC0.41□□□□□ -2.34
Rpap1Q80TE0 Gm28506-201ENSMUST00000189937 150 ntBASIC0.41□□□□□ -2.34
Rpap1Q80TE0 Gm5001-201ENSMUST00000204361 331 ntBASIC0.41□□□□□ -2.34
Rpap1Q80TE0 Gm22884-201ENSMUST00000083127 140 ntBASIC0.41□□□□□ -2.34
Rpap1Q80TE0 Gm14287-201ENSMUST00000121060 117 ntBASIC0.4□□□□□ -2.34
Rpap1Q80TE0 Gm24618-201ENSMUST00000177718 94 ntBASIC0.4□□□□□ -2.34
Rpap1Q80TE0 Gm10715-202ENSMUST00000177969 681 ntAPPRIS P5 TSL 5 BASIC0.4□□□□□ -2.34
Rpap1Q80TE0 Gm23953-201ENSMUST00000178214 94 ntBASIC0.4□□□□□ -2.34
Rpap1Q80TE0 Gm26332-201ENSMUST00000179813 94 ntBASIC0.4□□□□□ -2.34
Rpap1Q80TE0 Gm22863-201ENSMUST00000180265 94 ntBASIC0.4□□□□□ -2.34
Rpap1Q80TE0 Gm26200-201ENSMUST00000180273 79 ntBASIC0.4□□□□□ -2.34
Rpap1Q80TE0 Gm36953-201ENSMUST00000195295 268 ntBASIC0.4□□□□□ -2.34
Rpap1Q80TE0 AC153930.1-201ENSMUST00000220016 358 ntTSL 3 BASIC0.4□□□□□ -2.34
Rpap1Q80TE0 AC154636.2-201ENSMUST00000222538 161 ntBASIC0.4□□□□□ -2.34
Rpap1Q80TE0 AC136457.1-201ENSMUST00000224195 156 ntBASIC0.4□□□□□ -2.34
Rpap1Q80TE0 Gm24966-201ENSMUST00000082443 79 ntBASIC0.4□□□□□ -2.34
Rpap1Q80TE0 Gm23448-201ENSMUST00000083151 104 ntBASIC0.4□□□□□ -2.34
Rpap1Q80TE0 Mir155-201ENSMUST00000083463 65 ntBASIC0.4□□□□□ -2.34
Rpap1Q80TE0 Gm24523-201ENSMUST00000083965 132 ntBASIC0.4□□□□□ -2.34
Rpap1Q80TE0 CT030170.3-201ENSMUST00000221205 1815 ntBASIC0.39□□□□□ -2.35
Rpap1Q80TE0 Snord98-201ENSMUST00000116819 65 ntBASIC0.39□□□□□ -2.35
Rpap1Q80TE0 Gm26424-201ENSMUST00000122530 104 ntBASIC0.39□□□□□ -2.35
Rpap1Q80TE0 Mir15a-201ENSMUST00000175266 84 ntBASIC0.39□□□□□ -2.35
Rpap1Q80TE0 Gm26430-201ENSMUST00000178054 107 ntBASIC0.39□□□□□ -2.35
Rpap1Q80TE0 Gm37128-201ENSMUST00000192599 232 ntBASIC0.39□□□□□ -2.35
Rpap1Q80TE0 AC163033.1-201ENSMUST00000218608 157 ntBASIC0.39□□□□□ -2.35
Rpap1Q80TE0 Gm23055-201ENSMUST00000082805 94 ntBASIC0.39□□□□□ -2.35
Rpap1Q80TE0 Olfr1099-202ENSMUST00000213456 4867 ntAPPRIS P1 TSL 5 BASIC0.39□□□□□ -2.35
Rpap1Q80TE0 Rpl23a-ps9-201ENSMUST00000188369 463 ntBASIC0.38□□□□□ -2.35
Rpap1Q80TE0 Gm28921-201ENSMUST00000190219 378 ntBASIC0.38□□□□□ -2.35
Rpap1Q80TE0 Rpl23a-ps11-201ENSMUST00000191583 463 ntBASIC0.38□□□□□ -2.35
Rpap1Q80TE0 Gm44010-201ENSMUST00000204432 331 ntBASIC0.38□□□□□ -2.35
Rpap1Q80TE0 Gm44976-201ENSMUST00000205543 261 ntBASIC0.38□□□□□ -2.35
Rpap1Q80TE0 mt-Tm-201ENSMUST00000082395 69 ntBASIC0.38□□□□□ -2.35
Rpap1Q80TE0 Gm24356-201ENSMUST00000082859 106 ntBASIC0.38□□□□□ -2.35
Rpap1Q80TE0 Mir19b-2-201ENSMUST00000083539 84 ntBASIC0.38□□□□□ -2.35
Rpap1Q80TE0 Gm15102-201ENSMUST00000118740 1502 ntBASIC0.38□□□□□ -2.35
Rpap1Q80TE0 Gm15101-201ENSMUST00000178818 1502 ntBASIC0.38□□□□□ -2.35
Rpap1Q80TE0 Gm14568-201ENSMUST00000119321 294 ntBASIC0.38□□□□□ -2.35
Rpap1Q80TE0 Gm22796-201ENSMUST00000157234 106 ntBASIC0.38□□□□□ -2.35
Rpap1Q80TE0 Gm24903-201ENSMUST00000158131 126 ntBASIC0.38□□□□□ -2.35
Rpap1Q80TE0 Gm17148-201ENSMUST00000164702 249 ntBASIC0.38□□□□□ -2.35
Rpap1Q80TE0 Gm29229-201ENSMUST00000188874 323 ntBASIC0.38□□□□□ -2.35
Rpap1Q80TE0 Gm25801-201ENSMUST00000082638 106 ntBASIC0.38□□□□□ -2.35
Rpap1Q80TE0 Gm25697-201ENSMUST00000082902 98 ntBASIC0.38□□□□□ -2.35
Rpap1Q80TE0 Mir133a-1-201ENSMUST00000083465 68 ntBASIC0.38□□□□□ -2.35
Rpap1Q80TE0 Gm22771-201ENSMUST00000104449 91 ntBASIC0.37□□□□□ -2.35
Rpap1Q80TE0 Gm16358-201ENSMUST00000146046 210 ntBASIC0.37□□□□□ -2.35
Rpap1Q80TE0 Gm24678-201ENSMUST00000158756 104 ntBASIC0.37□□□□□ -2.35
Rpap1Q80TE0 Gm24799-201ENSMUST00000178431 79 ntBASIC0.37□□□□□ -2.35
Rpap1Q80TE0 Gm27717-201ENSMUST00000183933 151 ntBASIC0.37□□□□□ -2.35
Rpap1Q80TE0 Gm44921-201ENSMUST00000205290 301 ntBASIC0.37□□□□□ -2.35
Rpap1Q80TE0 Olfr1478-ps1-201ENSMUST00000208393 391 ntBASIC0.37□□□□□ -2.35
Rpap1Q80TE0 AC157476.1-201ENSMUST00000215555 169 ntBASIC0.37□□□□□ -2.35
Rpap1Q80TE0 AC155712.1-201ENSMUST00000219704 160 ntBASIC0.37□□□□□ -2.35
Rpap1Q80TE0 AC144733.1-201ENSMUST00000222893 1289 ntBASIC0.37□□□□□ -2.35
Rpap1Q80TE0 Gm26108-201ENSMUST00000083973 191 ntBASIC0.37□□□□□ -2.35
Rpap1Q80TE0 Gm25109-201ENSMUST00000122474 114 ntBASIC0.36□□□□□ -2.35
Rpap1Q80TE0 n-R5s70-201ENSMUST00000122650 116 ntBASIC0.36□□□□□ -2.35
Rpap1Q80TE0 Gm25805-201ENSMUST00000122788 108 ntBASIC0.36□□□□□ -2.35
Rpap1Q80TE0 Gm23036-201ENSMUST00000157885 99 ntBASIC0.36□□□□□ -2.35
Rpap1Q80TE0 Gm25643-201ENSMUST00000158874 103 ntBASIC0.36□□□□□ -2.35
Rpap1Q80TE0 Mir6346-201ENSMUST00000183982 81 ntBASIC0.36□□□□□ -2.35
Rpap1Q80TE0 Olfr865-ps1-201ENSMUST00000212071 85 ntBASIC0.36□□□□□ -2.35
Rpap1Q80TE0 Gm25378-201ENSMUST00000104333 129 ntBASIC0.35□□□□□ -2.35
Rpap1Q80TE0 Gm23169-201ENSMUST00000157157 112 ntBASIC0.35□□□□□ -2.35
Rpap1Q80TE0 Gm26484-201ENSMUST00000158018 106 ntBASIC0.35□□□□□ -2.35
Rpap1Q80TE0 Gm26335-201ENSMUST00000178449 107 ntBASIC0.35□□□□□ -2.35
Rpap1Q80TE0 Gm27957-201ENSMUST00000184054 127 ntBASIC0.35□□□□□ -2.35
Rpap1Q80TE0 Gm37468-201ENSMUST00000194767 854 ntTSL 1 (best) BASIC0.35□□□□□ -2.35
Rpap1Q80TE0 Smr2-203ENSMUST00000196477 676 ntAPPRIS ALT2 TSL 1 (best) BASIC0.35□□□□□ -2.35
Rpap1Q80TE0 Smr2-204ENSMUST00000199635 680 ntAPPRIS ALT2 TSL 1 (best) BASIC0.35□□□□□ -2.35
Rpap1Q80TE0 AC153541.1-201ENSMUST00000213786 294 ntBASIC0.35□□□□□ -2.35
Rpap1Q80TE0 AC124196.2-201ENSMUST00000224835 145 ntBASIC0.35□□□□□ -2.35
Rpap1Q80TE0 AC132918.1-201ENSMUST00000227877 925 ntBASIC0.35□□□□□ -2.35
Rpap1Q80TE0 Gm22704-201ENSMUST00000083027 137 ntBASIC0.35□□□□□ -2.35
Rpap1Q80TE0 Gm12433-201ENSMUST00000119659 255 ntBASIC0.34□□□□□ -2.36
Rpap1Q80TE0 Gm14846-201ENSMUST00000121868 216 ntBASIC0.34□□□□□ -2.36
Rpap1Q80TE0 Gm25434-201ENSMUST00000158278 167 ntBASIC0.34□□□□□ -2.36
Rpap1Q80TE0 Gm24487-201ENSMUST00000178017 63 ntBASIC0.34□□□□□ -2.36
Rpap1Q80TE0 Gm28435-201ENSMUST00000185496 108 ntBASIC0.34□□□□□ -2.36
Rpap1Q80TE0 Vmn1r-ps16-201ENSMUST00000204747 105 ntBASIC0.34□□□□□ -2.36
Rpap1Q80TE0 Gm18113-201ENSMUST00000220630 303 ntBASIC0.34□□□□□ -2.36
Rpap1Q80TE0 CT033781.2-201ENSMUST00000221113 153 ntBASIC0.34□□□□□ -2.36
Rpap1Q80TE0 AC117202.2-201ENSMUST00000226491 1101 ntBASIC0.34□□□□□ -2.36
Retrieved 100 of 76,532 protein–RNA pairs in 92.3 ms