Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Gm25410-201ENSMUST00000083758 137 ntBASIC2.08□□□□□ -2.08
Ubfd1Q78JW9 Gm15314-201ENSMUST00000120740 1887 ntBASIC2.07□□□□□ -2.08
Ubfd1Q78JW9 Olfr1437-202ENSMUST00000207241 3751 ntAPPRIS P1 TSL 2 BASIC2.07□□□□□ -2.08
Ubfd1Q78JW9 Ppp1r3a-201ENSMUST00000045096 6965 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
Ubfd1Q78JW9 Gm23951-201ENSMUST00000104029 132 ntBASIC2.07□□□□□ -2.08
Ubfd1Q78JW9 n-R5s200-201ENSMUST00000104194 113 ntBASIC2.07□□□□□ -2.08
Ubfd1Q78JW9 Gm16510-201ENSMUST00000153501 249 ntBASIC2.07□□□□□ -2.08
Ubfd1Q78JW9 Gm22083-201ENSMUST00000157586 102 ntBASIC2.07□□□□□ -2.08
Ubfd1Q78JW9 Gm22553-201ENSMUST00000157797 295 ntBASIC2.07□□□□□ -2.08
Ubfd1Q78JW9 Gm22075-201ENSMUST00000158599 192 ntBASIC2.07□□□□□ -2.08
Ubfd1Q78JW9 Gm20477-201ENSMUST00000174028 280 ntBASIC2.07□□□□□ -2.08
Ubfd1Q78JW9 Gm25994-201ENSMUST00000175392 101 ntBASIC2.07□□□□□ -2.08
Ubfd1Q78JW9 Hmga1b-202ENSMUST00000178955 120 ntBASIC2.07□□□□□ -2.08
Ubfd1Q78JW9 Gm29347-201ENSMUST00000186695 449 ntTSL 3 BASIC2.07□□□□□ -2.08
Ubfd1Q78JW9 Igkv13-76-201ENSMUST00000197621 347 ntBASIC2.07□□□□□ -2.08
Ubfd1Q78JW9 Gm38407-201ENSMUST00000218017 474 ntTSL 2 BASIC2.07□□□□□ -2.08
Ubfd1Q78JW9 Selenok-ps5-201ENSMUST00000221048 278 ntBASIC2.07□□□□□ -2.08
Ubfd1Q78JW9 Mir107-201ENSMUST00000083660 87 ntBASIC2.07□□□□□ -2.08
Ubfd1Q78JW9 Olfr24-203ENSMUST00000216754 4327 ntAPPRIS P1 TSL 2 BASIC2.07□□□□□ -2.08
Ubfd1Q78JW9 Usp9y-201ENSMUST00000091188 8094 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
Ubfd1Q78JW9 Gm24907-201ENSMUST00000116932 128 ntBASIC2.06□□□□□ -2.08
Ubfd1Q78JW9 Gm12068-201ENSMUST00000153153 376 ntTSL 3 BASIC2.06□□□□□ -2.08
Ubfd1Q78JW9 Mir1949-201ENSMUST00000157434 141 ntBASIC2.06□□□□□ -2.08
Ubfd1Q78JW9 Gm25834-201ENSMUST00000158916 101 ntBASIC2.06□□□□□ -2.08
Ubfd1Q78JW9 Ighv1-1-201ENSMUST00000194912 291 ntBASIC2.06□□□□□ -2.08
Ubfd1Q78JW9 Gm43865-201ENSMUST00000204721 127 ntBASIC2.06□□□□□ -2.08
Ubfd1Q78JW9 Olfr1044-202ENSMUST00000215171 3266 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
Ubfd1Q78JW9 Olfr1442-202ENSMUST00000207341 3126 ntAPPRIS P1 TSL 3 BASIC2.05□□□□□ -2.08
Ubfd1Q78JW9 Gm13560-201ENSMUST00000121865 329 ntBASIC2.05□□□□□ -2.08
Ubfd1Q78JW9 Vmn2r-ps78-201ENSMUST00000173350 308 ntBASIC2.05□□□□□ -2.08
Ubfd1Q78JW9 Mir669k-201ENSMUST00000177742 127 ntBASIC2.05□□□□□ -2.08
Ubfd1Q78JW9 Gm25673-201ENSMUST00000179957 127 ntBASIC2.05□□□□□ -2.08
Ubfd1Q78JW9 Gm27979-201ENSMUST00000185126 56 ntBASIC2.05□□□□□ -2.08
Ubfd1Q78JW9 AC120540.2-201ENSMUST00000221716 387 ntBASIC2.05□□□□□ -2.08
Ubfd1Q78JW9 Hmgb1l-201ENSMUST00000082150 571 ntBASIC2.05□□□□□ -2.08
Ubfd1Q78JW9 Snora33-201ENSMUST00000093556 129 ntBASIC2.05□□□□□ -2.08
Ubfd1Q78JW9 Gm2869-201ENSMUST00000124359 2621 ntBASIC2.05□□□□□ -2.08
Ubfd1Q78JW9 Olfr851-202ENSMUST00000214130 7123 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
Ubfd1Q78JW9 Trdn-201ENSMUST00000095762 4514 ntAPPRIS P2 TSL 5 BASIC2.04□□□□□ -2.08
Ubfd1Q78JW9 Gpr174-207ENSMUST00000178838 4955 ntAPPRIS P1 TSL 2 BASIC2.04□□□□□ -2.08
Ubfd1Q78JW9 Gm14405-201ENSMUST00000117808 2330 ntBASIC2.04□□□□□ -2.08
Ubfd1Q78JW9 Gm25113-201ENSMUST00000157185 143 ntBASIC2.04□□□□□ -2.08
Ubfd1Q78JW9 Gm23230-201ENSMUST00000157298 133 ntBASIC2.04□□□□□ -2.08
Ubfd1Q78JW9 Gm23584-201ENSMUST00000157655 129 ntBASIC2.04□□□□□ -2.08
Ubfd1Q78JW9 Gm22767-201ENSMUST00000158365 165 ntBASIC2.04□□□□□ -2.08
Ubfd1Q78JW9 Mir6997-201ENSMUST00000184313 71 ntBASIC2.04□□□□□ -2.08
Ubfd1Q78JW9 Gm28076-201ENSMUST00000188337 410 ntTSL 3 BASIC2.04□□□□□ -2.08
Ubfd1Q78JW9 Gm28912-201ENSMUST00000189001 234 ntBASIC2.04□□□□□ -2.08
Ubfd1Q78JW9 Olfr1442-204ENSMUST00000208657 3148 ntAPPRIS P1 TSL 3 BASIC2.04□□□□□ -2.08
Ubfd1Q78JW9 AC165293.1-201ENSMUST00000219669 329 ntBASIC2.04□□□□□ -2.08
Ubfd1Q78JW9 AC098718.1-201ENSMUST00000226166 175 ntBASIC2.04□□□□□ -2.08
Ubfd1Q78JW9 Gm25142-201ENSMUST00000082698 107 ntBASIC2.04□□□□□ -2.08
Ubfd1Q78JW9 Gm25357-201ENSMUST00000082745 72 ntBASIC2.04□□□□□ -2.08
Ubfd1Q78JW9 Slco6c1-201ENSMUST00000027569 2747 ntAPPRIS P2 TSL 1 (best) BASIC2.03□□□□□ -2.08
Ubfd1Q78JW9 Gm29262-201ENSMUST00000190084 196 ntBASIC2.03□□□□□ -2.08
Ubfd1Q78JW9 Gm43753-201ENSMUST00000196539 3309 ntBASIC2.03□□□□□ -2.08
Ubfd1Q78JW9 Olfr1450-202ENSMUST00000213587 2872 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
Ubfd1Q78JW9 Gm25825-201ENSMUST00000157091 124 ntBASIC2.02□□□□□ -2.09
Ubfd1Q78JW9 Gm23665-201ENSMUST00000158054 62 ntBASIC2.02□□□□□ -2.09
Ubfd1Q78JW9 Gm27722-201ENSMUST00000183908 76 ntBASIC2.02□□□□□ -2.09
Ubfd1Q78JW9 Gm29308-201ENSMUST00000188863 315 ntBASIC2.02□□□□□ -2.09
Ubfd1Q78JW9 Gm23370-201ENSMUST00000199545 130 ntBASIC2.02□□□□□ -2.09
Ubfd1Q78JW9 AC129202.1-201ENSMUST00000224895 526 ntBASIC2.02□□□□□ -2.09
Ubfd1Q78JW9 Gm10203-201ENSMUST00000087348 198 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
Ubfd1Q78JW9 Olfr1442-203ENSMUST00000208494 3593 ntAPPRIS P1 TSL 3 BASIC2.02□□□□□ -2.09
Ubfd1Q78JW9 Olfr561-202ENSMUST00000213432 2498 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
Ubfd1Q78JW9 Catsperb-201ENSMUST00000055156 3716 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
Ubfd1Q78JW9 Knl1-202ENSMUST00000028802 7800 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
Ubfd1Q78JW9 Gm43484-201ENSMUST00000198333 5966 ntBASIC2.01□□□□□ -2.09
Ubfd1Q78JW9 Gm22051-201ENSMUST00000117002 127 ntBASIC2.01□□□□□ -2.09
Ubfd1Q78JW9 Gm14937-201ENSMUST00000119709 208 ntBASIC2.01□□□□□ -2.09
Ubfd1Q78JW9 Gm22279-201ENSMUST00000157200 93 ntBASIC2.01□□□□□ -2.09
Ubfd1Q78JW9 Gm26345-201ENSMUST00000157534 120 ntBASIC2.01□□□□□ -2.09
Ubfd1Q78JW9 Gm22727-201ENSMUST00000158090 116 ntBASIC2.01□□□□□ -2.09
Ubfd1Q78JW9 Gm24668-201ENSMUST00000158935 104 ntBASIC2.01□□□□□ -2.09
Ubfd1Q78JW9 Mir7016-201ENSMUST00000184308 72 ntBASIC2.01□□□□□ -2.09
Ubfd1Q78JW9 Mir3569-201ENSMUST00000185080 58 ntBASIC2.01□□□□□ -2.09
Ubfd1Q78JW9 Mucl1-202ENSMUST00000226484 758 ntAPPRIS P5 BASIC2.01□□□□□ -2.09
Ubfd1Q78JW9 Snord82-201ENSMUST00000082889 70 ntBASIC2.01□□□□□ -2.09
Ubfd1Q78JW9 Ifi203-209ENSMUST00000156895 3605 ntAPPRIS ALT2 TSL 1 (best) BASIC2.01□□□□□ -2.09
Ubfd1Q78JW9 Olfr659-202ENSMUST00000214986 4842 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
Ubfd1Q78JW9 Olfr1029-202ENSMUST00000217244 3743 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
Ubfd1Q78JW9 Mir466p-201ENSMUST00000103925 89 ntBASIC2□□□□□ -2.09
Ubfd1Q78JW9 Gm12865-201ENSMUST00000137353 326 ntTSL 2 BASIC2□□□□□ -2.09
Ubfd1Q78JW9 Mir6406-201ENSMUST00000183592 120 ntBASIC2□□□□□ -2.09
Ubfd1Q78JW9 Gm27443-201ENSMUST00000184660 98 ntBASIC2□□□□□ -2.09
Ubfd1Q78JW9 Gm38183-201ENSMUST00000193189 205 ntBASIC2□□□□□ -2.09
Ubfd1Q78JW9 Gm24762-201ENSMUST00000083689 104 ntBASIC2□□□□□ -2.09
Ubfd1Q78JW9 Ppp4r3c-ps-201ENSMUST00000151416 2445 ntBASIC2□□□□□ -2.09
Ubfd1Q78JW9 Gm13219-201ENSMUST00000144870 3019 ntTSL 1 (best) BASIC2□□□□□ -2.09
Ubfd1Q78JW9 Gm3081-201ENSMUST00000193413 3025 ntBASIC2□□□□□ -2.09
Ubfd1Q78JW9 Gm23656-201ENSMUST00000122626 112 ntBASIC1.99□□□□□ -2.09
Ubfd1Q78JW9 n-R5s159-201ENSMUST00000122681 120 ntBASIC1.99□□□□□ -2.09
Ubfd1Q78JW9 Gm25914-201ENSMUST00000157618 153 ntBASIC1.99□□□□□ -2.09
Ubfd1Q78JW9 Gm25884-201ENSMUST00000157782 62 ntBASIC1.99□□□□□ -2.09
Ubfd1Q78JW9 Gm22803-201ENSMUST00000158049 283 ntBASIC1.99□□□□□ -2.09
Ubfd1Q78JW9 Gm23342-201ENSMUST00000158958 115 ntBASIC1.99□□□□□ -2.09
Ubfd1Q78JW9 Gm27803-201ENSMUST00000183763 119 ntBASIC1.99□□□□□ -2.09
Ubfd1Q78JW9 Mir7017-201ENSMUST00000184894 62 ntBASIC1.99□□□□□ -2.09
Ubfd1Q78JW9 Gm28344-201ENSMUST00000185704 279 ntBASIC1.99□□□□□ -2.09
Retrieved 100 of 76,532 protein–RNA pairs in 141.5 ms