Protein–RNA interactions for Protein: Q6PGB8

Smarca1, Probable global transcription activator SNF2L1, mousemouse

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca1Q6PGB8 Gm15379-201ENSMUST00000121224 648 ntBASIC1.91□□□□□ -2.1
Smarca1Q6PGB8 Gm25664-201ENSMUST00000157697 107 ntBASIC1.91□□□□□ -2.1
Smarca1Q6PGB8 Gm17113-201ENSMUST00000170118 171 ntBASIC1.91□□□□□ -2.1
Smarca1Q6PGB8 Gm24572-201ENSMUST00000175505 88 ntBASIC1.91□□□□□ -2.1
Smarca1Q6PGB8 Vmn2r-ps116-201ENSMUST00000175997 126 ntBASIC1.91□□□□□ -2.1
Smarca1Q6PGB8 Gm21903-201ENSMUST00000178039 90 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
Smarca1Q6PGB8 Gm25024-201ENSMUST00000179667 104 ntBASIC1.91□□□□□ -2.1
Smarca1Q6PGB8 Gm27511-201ENSMUST00000183502 127 ntBASIC1.91□□□□□ -2.1
Smarca1Q6PGB8 Gm28921-201ENSMUST00000190219 378 ntBASIC1.91□□□□□ -2.1
Smarca1Q6PGB8 AC161426.1-201ENSMUST00000214137 286 ntBASIC1.91□□□□□ -2.1
Smarca1Q6PGB8 CT010454.1-201ENSMUST00000225975 265 ntBASIC1.91□□□□□ -2.1
Smarca1Q6PGB8 AC126691.1-201ENSMUST00000226534 202 ntBASIC1.91□□□□□ -2.1
Smarca1Q6PGB8 Gm24038-201ENSMUST00000082872 159 ntBASIC1.91□□□□□ -2.1
Smarca1Q6PGB8 Mir223-201ENSMUST00000102112 110 ntBASIC1.9□□□□□ -2.11
Smarca1Q6PGB8 Gm22784-201ENSMUST00000104088 132 ntBASIC1.9□□□□□ -2.11
Smarca1Q6PGB8 Fau-ps1-201ENSMUST00000119675 252 ntBASIC1.9□□□□□ -2.11
Smarca1Q6PGB8 Gm6025-201ENSMUST00000121517 201 ntBASIC1.9□□□□□ -2.11
Smarca1Q6PGB8 Gm13569-201ENSMUST00000137221 574 ntTSL 3 BASIC1.9□□□□□ -2.11
Smarca1Q6PGB8 Gm22279-201ENSMUST00000157200 93 ntBASIC1.9□□□□□ -2.11
Smarca1Q6PGB8 Gm24392-201ENSMUST00000158136 103 ntBASIC1.9□□□□□ -2.11
Smarca1Q6PGB8 Gm24667-201ENSMUST00000158938 103 ntBASIC1.9□□□□□ -2.11
Smarca1Q6PGB8 Gm23267-201ENSMUST00000178490 132 ntBASIC1.9□□□□□ -2.11
Smarca1Q6PGB8 Gm27517-201ENSMUST00000184347 236 ntBASIC1.9□□□□□ -2.11
Smarca1Q6PGB8 Gm28537-201ENSMUST00000189026 315 ntBASIC1.9□□□□□ -2.11
Smarca1Q6PGB8 Gm29631-201ENSMUST00000191065 315 ntBASIC1.9□□□□□ -2.11
Smarca1Q6PGB8 Gm6105-201ENSMUST00000200580 624 ntBASIC1.9□□□□□ -2.11
Smarca1Q6PGB8 Gm22358-201ENSMUST00000082877 122 ntBASIC1.9□□□□□ -2.11
Smarca1Q6PGB8 Gm25188-201ENSMUST00000083913 122 ntBASIC1.9□□□□□ -2.11
Smarca1Q6PGB8 Olfr805-204ENSMUST00000217219 3314 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
Smarca1Q6PGB8 Mir3096-201ENSMUST00000116685 71 ntBASIC1.89□□□□□ -2.11
Smarca1Q6PGB8 Gm22097-201ENSMUST00000157929 278 ntBASIC1.89□□□□□ -2.11
Smarca1Q6PGB8 Gm40331-201ENSMUST00000198430 217 ntTSL 3 BASIC1.89□□□□□ -2.11
Smarca1Q6PGB8 AC159896.1-201ENSMUST00000215264 215 ntBASIC1.89□□□□□ -2.11
Smarca1Q6PGB8 Olfr1448-203ENSMUST00000213713 4336 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
Smarca1Q6PGB8 Gm26339-201ENSMUST00000102368 99 ntBASIC1.88□□□□□ -2.11
Smarca1Q6PGB8 Gm26080-201ENSMUST00000104069 131 ntBASIC1.88□□□□□ -2.11
Smarca1Q6PGB8 Gm27545-201ENSMUST00000184755 202 ntBASIC1.88□□□□□ -2.11
Smarca1Q6PGB8 Gm27332-201ENSMUST00000184893 112 ntBASIC1.88□□□□□ -2.11
Smarca1Q6PGB8 Gm29014-201ENSMUST00000191422 326 ntBASIC1.88□□□□□ -2.11
Smarca1Q6PGB8 AL772271.1-201ENSMUST00000196848 65 ntBASIC1.88□□□□□ -2.11
Smarca1Q6PGB8 Gm22761-201ENSMUST00000102278 96 ntBASIC1.87□□□□□ -2.11
Smarca1Q6PGB8 Gm23208-201ENSMUST00000158666 127 ntBASIC1.87□□□□□ -2.11
Smarca1Q6PGB8 Gm25235-201ENSMUST00000179933 107 ntBASIC1.87□□□□□ -2.11
Smarca1Q6PGB8 AC117232.1-201ENSMUST00000197964 119 ntBASIC1.87□□□□□ -2.11
Smarca1Q6PGB8 Mir221-201ENSMUST00000083488 95 ntBASIC1.87□□□□□ -2.11
Smarca1Q6PGB8 Gm10217-201ENSMUST00000088080 135 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
Smarca1Q6PGB8 Gm42862-201ENSMUST00000197494 2621 ntBASIC1.86□□□□□ -2.11
Smarca1Q6PGB8 Traj37-201ENSMUST00000103705 60 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
Smarca1Q6PGB8 Gm13560-201ENSMUST00000121865 329 ntBASIC1.86□□□□□ -2.11
Smarca1Q6PGB8 Gm23101-201ENSMUST00000157550 137 ntBASIC1.86□□□□□ -2.11
Smarca1Q6PGB8 Gm23219-201ENSMUST00000158123 87 ntBASIC1.86□□□□□ -2.11
Smarca1Q6PGB8 Gm26004-201ENSMUST00000158804 116 ntBASIC1.86□□□□□ -2.11
Smarca1Q6PGB8 Gm23194-201ENSMUST00000158813 105 ntBASIC1.86□□□□□ -2.11
Smarca1Q6PGB8 Gm25643-201ENSMUST00000158874 103 ntBASIC1.86□□□□□ -2.11
Smarca1Q6PGB8 Ranbp2-ps5-201ENSMUST00000185141 379 ntBASIC1.86□□□□□ -2.11
Smarca1Q6PGB8 Gm44384-201ENSMUST00000200208 114 ntBASIC1.86□□□□□ -2.11
Smarca1Q6PGB8 Olfr277-ps1-201ENSMUST00000205749 285 ntBASIC1.86□□□□□ -2.11
Smarca1Q6PGB8 AC069074.1-201ENSMUST00000220048 381 ntBASIC1.86□□□□□ -2.11
Smarca1Q6PGB8 Mir181b-2-201ENSMUST00000083644 89 ntBASIC1.86□□□□□ -2.11
Smarca1Q6PGB8 Vmn1r29-202ENSMUST00000226971 4714 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
Smarca1Q6PGB8 Gm14846-201ENSMUST00000121868 216 ntBASIC1.85□□□□□ -2.11
Smarca1Q6PGB8 Gm15214-201ENSMUST00000122155 470 ntBASIC1.85□□□□□ -2.11
Smarca1Q6PGB8 Gm25279-201ENSMUST00000122608 133 ntBASIC1.85□□□□□ -2.11
Smarca1Q6PGB8 Gm25825-201ENSMUST00000157091 124 ntBASIC1.85□□□□□ -2.11
Smarca1Q6PGB8 Gm24366-201ENSMUST00000175383 86 ntBASIC1.85□□□□□ -2.11
Smarca1Q6PGB8 Gm42719-201ENSMUST00000197393 355 ntBASIC1.85□□□□□ -2.11
Smarca1Q6PGB8 AC122367.2-201ENSMUST00000220987 534 ntTSL 2 BASIC1.85□□□□□ -2.11
Smarca1Q6PGB8 Gm22421-201ENSMUST00000083058 107 ntBASIC1.85□□□□□ -2.11
Smarca1Q6PGB8 Mir148b-201ENSMUST00000083626 97 ntBASIC1.85□□□□□ -2.11
Smarca1Q6PGB8 Olfr935-202ENSMUST00000214157 1693 ntAPPRIS P1 TSL 3 BASIC1.85□□□□□ -2.11
Smarca1Q6PGB8 Olfr1013-202ENSMUST00000216397 4925 ntAPPRIS P1 TSL 2 BASIC1.85□□□□□ -2.11
Smarca1Q6PGB8 Zfp960-201ENSMUST00000127027 2667 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
Smarca1Q6PGB8 AC164629.4-201ENSMUST00000218505 3247 ntBASIC1.84□□□□□ -2.11
Smarca1Q6PGB8 Gm12797-201ENSMUST00000118645 273 ntBASIC1.84□□□□□ -2.11
Smarca1Q6PGB8 Gm22386-201ENSMUST00000158192 129 ntBASIC1.84□□□□□ -2.11
Smarca1Q6PGB8 Gm23967-201ENSMUST00000175062 78 ntBASIC1.84□□□□□ -2.11
Smarca1Q6PGB8 Gm27248-201ENSMUST00000184004 166 ntBASIC1.84□□□□□ -2.11
Smarca1Q6PGB8 Gm19123-201ENSMUST00000190716 651 ntBASIC1.84□□□□□ -2.11
Smarca1Q6PGB8 AL928567.1-201ENSMUST00000197891 138 ntBASIC1.84□□□□□ -2.11
Smarca1Q6PGB8 Selenok-ps5-201ENSMUST00000221048 278 ntBASIC1.84□□□□□ -2.11
Smarca1Q6PGB8 Snora19-201ENSMUST00000082962 132 ntBASIC1.84□□□□□ -2.11
Smarca1Q6PGB8 Gm23658-201ENSMUST00000083233 132 ntBASIC1.84□□□□□ -2.11
Smarca1Q6PGB8 Gm24261-201ENSMUST00000083744 104 ntBASIC1.84□□□□□ -2.11
Smarca1Q6PGB8 Gm14327-201ENSMUST00000099001 192 ntTSL 5 BASIC1.84□□□□□ -2.11
Smarca1Q6PGB8 Gm22665-201ENSMUST00000158720 275 ntBASIC1.83□□□□□ -2.12
Smarca1Q6PGB8 Gm29613-201ENSMUST00000185846 313 ntBASIC1.83□□□□□ -2.12
Smarca1Q6PGB8 Gm29544-201ENSMUST00000188860 313 ntBASIC1.83□□□□□ -2.12
Smarca1Q6PGB8 Gm28808-201ENSMUST00000190978 313 ntBASIC1.83□□□□□ -2.12
Smarca1Q6PGB8 Gm43563-201ENSMUST00000196761 198 ntBASIC1.83□□□□□ -2.12
Smarca1Q6PGB8 Gm45092-201ENSMUST00000205944 545 ntTSL 3 BASIC1.83□□□□□ -2.12
Smarca1Q6PGB8 AC157476.1-201ENSMUST00000215555 169 ntBASIC1.83□□□□□ -2.12
Smarca1Q6PGB8 Vmn2r-ps102-203ENSMUST00000222739 604 ntTSL 5 BASIC1.83□□□□□ -2.12
Smarca1Q6PGB8 Olfr1431-202ENSMUST00000213759 3001 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
Smarca1Q6PGB8 Vmn2r69-201ENSMUST00000171213 2553 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
Smarca1Q6PGB8 Mir873a-201ENSMUST00000104863 77 ntBASIC1.82□□□□□ -2.12
Smarca1Q6PGB8 Gm24595-201ENSMUST00000122501 110 ntBASIC1.82□□□□□ -2.12
Smarca1Q6PGB8 Gm25884-201ENSMUST00000157782 62 ntBASIC1.82□□□□□ -2.12
Smarca1Q6PGB8 Gm24174-201ENSMUST00000158933 111 ntBASIC1.82□□□□□ -2.12
Smarca1Q6PGB8 Gm23571-201ENSMUST00000180073 127 ntBASIC1.82□□□□□ -2.12
Smarca1Q6PGB8 Mir6336-201ENSMUST00000183581 130 ntBASIC1.82□□□□□ -2.12
Retrieved 100 of 76,532 protein–RNA pairs in 210.3 ms