Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Hif1a-202ENSMUST00000110461 4385 ntAPPRIS ALT2 TSL 1 (best) BASIC2.75□□□□□ -1.97
Scaf4Q6PFF0 n-R5s26-201ENSMUST00000104601 122 ntBASIC2.74□□□□□ -1.97
Scaf4Q6PFF0 Gm15466-201ENSMUST00000122299 333 ntBASIC2.74□□□□□ -1.97
Scaf4Q6PFF0 Gm22790-201ENSMUST00000157229 129 ntBASIC2.74□□□□□ -1.97
Scaf4Q6PFF0 Gm20438-201ENSMUST00000174441 329 ntBASIC2.74□□□□□ -1.97
Scaf4Q6PFF0 Gm27792-201ENSMUST00000184031 115 ntBASIC2.74□□□□□ -1.97
Scaf4Q6PFF0 Gm44964-201ENSMUST00000207011 273 ntBASIC2.74□□□□□ -1.97
Scaf4Q6PFF0 Gm45791-201ENSMUST00000212908 352 ntBASIC2.74□□□□□ -1.97
Scaf4Q6PFF0 Mir340-201ENSMUST00000083483 98 ntBASIC2.74□□□□□ -1.97
Scaf4Q6PFF0 Gm23038-201ENSMUST00000083873 104 ntBASIC2.74□□□□□ -1.97
Scaf4Q6PFF0 Olfr509-202ENSMUST00000213756 3547 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
Scaf4Q6PFF0 Uty-201ENSMUST00000069309 5208 ntAPPRIS P3 TSL 1 (best) BASIC2.74□□□□□ -1.97
Scaf4Q6PFF0 Mir542-201ENSMUST00000102186 85 ntBASIC2.73□□□□□ -1.97
Scaf4Q6PFF0 Gm22270-201ENSMUST00000104034 132 ntBASIC2.73□□□□□ -1.97
Scaf4Q6PFF0 Gm24376-201ENSMUST00000104399 127 ntBASIC2.73□□□□□ -1.97
Scaf4Q6PFF0 Gm22497-201ENSMUST00000104499 131 ntBASIC2.73□□□□□ -1.97
Scaf4Q6PFF0 Gm26341-201ENSMUST00000104561 134 ntBASIC2.73□□□□□ -1.97
Scaf4Q6PFF0 Gm44489-201ENSMUST00000104619 97 ntBASIC2.73□□□□□ -1.97
Scaf4Q6PFF0 Gm25945-201ENSMUST00000122484 135 ntBASIC2.73□□□□□ -1.97
Scaf4Q6PFF0 Gm43439-201ENSMUST00000138710 322 ntTSL 3 BASIC2.73□□□□□ -1.97
Scaf4Q6PFF0 Gm14389-201ENSMUST00000140453 241 ntBASIC2.73□□□□□ -1.97
Scaf4Q6PFF0 Gm24681-201ENSMUST00000158760 107 ntBASIC2.73□□□□□ -1.97
Scaf4Q6PFF0 Gm27582-201ENSMUST00000184084 126 ntBASIC2.73□□□□□ -1.97
Scaf4Q6PFF0 Gm36551-201ENSMUST00000196787 300 ntTSL 5 BASIC2.73□□□□□ -1.97
Scaf4Q6PFF0 Gm44024-201ENSMUST00000203008 476 ntBASIC2.73□□□□□ -1.97
Scaf4Q6PFF0 Gm43932-201ENSMUST00000204499 52 ntBASIC2.73□□□□□ -1.97
Scaf4Q6PFF0 Gm44903-201ENSMUST00000206840 130 ntBASIC2.73□□□□□ -1.97
Scaf4Q6PFF0 CT009696.1-201ENSMUST00000215745 256 ntBASIC2.73□□□□□ -1.97
Scaf4Q6PFF0 1700010L04Rik-201ENSMUST00000032872 330 ntTSL 5 BASIC2.73□□□□□ -1.97
Scaf4Q6PFF0 Gm26458-201ENSMUST00000082832 128 ntBASIC2.73□□□□□ -1.97
Scaf4Q6PFF0 Gm22251-201ENSMUST00000083216 107 ntBASIC2.73□□□□□ -1.97
Scaf4Q6PFF0 Gm26168-201ENSMUST00000083787 112 ntBASIC2.73□□□□□ -1.97
Scaf4Q6PFF0 Olfr1161-202ENSMUST00000214438 3675 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
Scaf4Q6PFF0 N4bp2l2-201ENSMUST00000118316 8982 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
Scaf4Q6PFF0 Gm15289-201ENSMUST00000117793 244 ntBASIC2.72□□□□□ -1.97
Scaf4Q6PFF0 Gm20538-201ENSMUST00000166808 225 ntAPPRIS P1 TSL 3 BASIC2.72□□□□□ -1.97
Scaf4Q6PFF0 Gm28647-201ENSMUST00000188416 197 ntBASIC2.72□□□□□ -1.97
Scaf4Q6PFF0 Igkv11-118-201ENSMUST00000199448 346 ntBASIC2.72□□□□□ -1.97
Scaf4Q6PFF0 AC122465.2-201ENSMUST00000221774 354 ntBASIC2.72□□□□□ -1.97
Scaf4Q6PFF0 Gm16976-205ENSMUST00000227324 226 ntBASIC2.72□□□□□ -1.97
Scaf4Q6PFF0 Gm23244-201ENSMUST00000083375 92 ntBASIC2.72□□□□□ -1.97
Scaf4Q6PFF0 Olfr1454-202ENSMUST00000213806 3906 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
Scaf4Q6PFF0 Olfr726-204ENSMUST00000215105 1752 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
Scaf4Q6PFF0 Olfr898-203ENSMUST00000217063 4169 ntAPPRIS ALT2 TSL 5 BASIC2.71□□□□□ -1.97
Scaf4Q6PFF0 Ighv9-3-201ENSMUST00000103473 351 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
Scaf4Q6PFF0 Gm14602-201ENSMUST00000118625 340 ntBASIC2.71□□□□□ -1.98
Scaf4Q6PFF0 Gm14568-201ENSMUST00000119321 294 ntBASIC2.71□□□□□ -1.98
Scaf4Q6PFF0 Gm7209-201ENSMUST00000122339 333 ntBASIC2.71□□□□□ -1.98
Scaf4Q6PFF0 Gm22416-201ENSMUST00000158590 88 ntBASIC2.71□□□□□ -1.98
Scaf4Q6PFF0 Gm25119-201ENSMUST00000158815 88 ntBASIC2.71□□□□□ -1.98
Scaf4Q6PFF0 Gm22510-201ENSMUST00000179304 79 ntBASIC2.71□□□□□ -1.98
Scaf4Q6PFF0 Gm26336-201ENSMUST00000179449 79 ntBASIC2.71□□□□□ -1.98
Scaf4Q6PFF0 Gm26390-201ENSMUST00000179628 79 ntBASIC2.71□□□□□ -1.98
Scaf4Q6PFF0 Gm26741-201ENSMUST00000180473 87 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
Scaf4Q6PFF0 Mir7578-201ENSMUST00000183455 82 ntBASIC2.71□□□□□ -1.98
Scaf4Q6PFF0 Gm43217-201ENSMUST00000199513 367 ntBASIC2.71□□□□□ -1.98
Scaf4Q6PFF0 Gm44921-201ENSMUST00000205290 301 ntBASIC2.71□□□□□ -1.98
Scaf4Q6PFF0 AC125350.4-201ENSMUST00000225895 273 ntBASIC2.71□□□□□ -1.98
Scaf4Q6PFF0 Gm25130-201ENSMUST00000082650 156 ntBASIC2.71□□□□□ -1.98
Scaf4Q6PFF0 Gm23509-201ENSMUST00000083080 160 ntBASIC2.71□□□□□ -1.98
Scaf4Q6PFF0 Olfr1370-204ENSMUST00000215806 4322 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
Scaf4Q6PFF0 Gm26473-201ENSMUST00000116763 127 ntBASIC2.7□□□□□ -1.98
Scaf4Q6PFF0 Gm26104-201ENSMUST00000157250 108 ntBASIC2.7□□□□□ -1.98
Scaf4Q6PFF0 Gm25910-201ENSMUST00000157620 140 ntBASIC2.7□□□□□ -1.98
Scaf4Q6PFF0 Gm23043-201ENSMUST00000157890 109 ntBASIC2.7□□□□□ -1.98
Scaf4Q6PFF0 Gm25367-201ENSMUST00000158846 106 ntBASIC2.7□□□□□ -1.98
Scaf4Q6PFF0 Gm23567-201ENSMUST00000178005 107 ntBASIC2.7□□□□□ -1.98
Scaf4Q6PFF0 Mir6350-201ENSMUST00000183639 105 ntBASIC2.7□□□□□ -1.98
Scaf4Q6PFF0 Sult1c2-ps2-201ENSMUST00000196414 276 ntBASIC2.7□□□□□ -1.98
Scaf4Q6PFF0 Traj57-202ENSMUST00000196977 63 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
Scaf4Q6PFF0 Gm26126-201ENSMUST00000083188 164 ntBASIC2.7□□□□□ -1.98
Scaf4Q6PFF0 Gm10730-201ENSMUST00000194097 2723 ntBASIC2.7□□□□□ -1.98
Scaf4Q6PFF0 Gm37320-201ENSMUST00000192781 4953 ntBASIC2.7□□□□□ -1.98
Scaf4Q6PFF0 Olfr1450-202ENSMUST00000213587 2872 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
Scaf4Q6PFF0 AC157570.1-201ENSMUST00000218052 3778 ntBASIC2.7□□□□□ -1.98
Scaf4Q6PFF0 Gm38162-201ENSMUST00000195562 4597 ntBASIC2.69□□□□□ -1.98
Scaf4Q6PFF0 Gm42718-201ENSMUST00000197319 2681 ntBASIC2.69□□□□□ -1.98
Scaf4Q6PFF0 AC164164.1-201ENSMUST00000223245 2340 ntBASIC2.69□□□□□ -1.98
Scaf4Q6PFF0 Vmn1r185-211ENSMUST00000228467 6915 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
Scaf4Q6PFF0 Gm22033-201ENSMUST00000116947 90 ntBASIC2.69□□□□□ -1.98
Scaf4Q6PFF0 Gm22221-201ENSMUST00000157362 103 ntBASIC2.69□□□□□ -1.98
Scaf4Q6PFF0 Gm25888-201ENSMUST00000157778 302 ntBASIC2.69□□□□□ -1.98
Scaf4Q6PFF0 Gm24837-201ENSMUST00000158683 81 ntBASIC2.69□□□□□ -1.98
Scaf4Q6PFF0 Gm25678-201ENSMUST00000174984 73 ntBASIC2.69□□□□□ -1.98
Scaf4Q6PFF0 Gm25476-201ENSMUST00000175125 185 ntBASIC2.69□□□□□ -1.98
Scaf4Q6PFF0 Gm24082-201ENSMUST00000175175 83 ntBASIC2.69□□□□□ -1.98
Scaf4Q6PFF0 Gm44057-201ENSMUST00000204547 96 ntBASIC2.69□□□□□ -1.98
Scaf4Q6PFF0 AC150314.1-201ENSMUST00000214798 238 ntBASIC2.69□□□□□ -1.98
Scaf4Q6PFF0 Olfr58-202ENSMUST00000215112 2454 ntAPPRIS P1 TSL 2 BASIC2.69□□□□□ -1.98
Scaf4Q6PFF0 Vmn1r76-203ENSMUST00000226947 8145 ntAPPRIS ALT2 BASIC2.69□□□□□ -1.98
Scaf4Q6PFF0 Gm14400-201ENSMUST00000117234 2135 ntBASIC2.69□□□□□ -1.98
Scaf4Q6PFF0 Slitrk6-201ENSMUST00000078386 4240 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
Scaf4Q6PFF0 Gm19965-201ENSMUST00000179777 3030 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
Scaf4Q6PFF0 Vmn1r28-201ENSMUST00000226813 10877 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
Scaf4Q6PFF0 Vmn1r28-202ENSMUST00000227805 10892 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
Scaf4Q6PFF0 Gm25544-201ENSMUST00000122676 120 ntBASIC2.68□□□□□ -1.98
Scaf4Q6PFF0 Gm25825-201ENSMUST00000157091 124 ntBASIC2.68□□□□□ -1.98
Scaf4Q6PFF0 Gm22943-201ENSMUST00000158564 76 ntBASIC2.68□□□□□ -1.98
Scaf4Q6PFF0 Gm24813-201ENSMUST00000175310 84 ntBASIC2.68□□□□□ -1.98
Scaf4Q6PFF0 Defb38-201ENSMUST00000066416 286 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
Retrieved 100 of 76,532 protein–RNA pairs in 9.9 ms