Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Gm44526-201ENSMUST00000204664 121 ntBASIC2.23□□□□□ -2.05
Rnf220Q6PDX6 Gm5002-201ENSMUST00000207145 223 ntBASIC2.23□□□□□ -2.05
Rnf220Q6PDX6 Gm44966-201ENSMUST00000208096 157 ntBASIC2.23□□□□□ -2.05
Rnf220Q6PDX6 AC120555.1-201ENSMUST00000221020 222 ntTSL 5 BASIC2.23□□□□□ -2.05
Rnf220Q6PDX6 Snora3-201ENSMUST00000083082 132 ntBASIC2.23□□□□□ -2.05
Rnf220Q6PDX6 Ifi203-209ENSMUST00000156895 3605 ntAPPRIS ALT2 TSL 1 (best) BASIC2.23□□□□□ -2.05
Rnf220Q6PDX6 Olfr659-202ENSMUST00000214986 4842 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
Rnf220Q6PDX6 Usp9y-201ENSMUST00000091188 8094 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
Rnf220Q6PDX6 Gm22494-201ENSMUST00000104495 128 ntBASIC2.22□□□□□ -2.05
Rnf220Q6PDX6 Vmn1r-ps120-201ENSMUST00000120288 377 ntBASIC2.22□□□□□ -2.05
Rnf220Q6PDX6 Gm23113-201ENSMUST00000158477 99 ntBASIC2.22□□□□□ -2.05
Rnf220Q6PDX6 Gm27722-201ENSMUST00000183908 76 ntBASIC2.22□□□□□ -2.05
Rnf220Q6PDX6 Gm2511-201ENSMUST00000205521 457 ntTSL 3 BASIC2.22□□□□□ -2.05
Rnf220Q6PDX6 Gm24474-201ENSMUST00000220504 469 ntTSL 2 BASIC2.22□□□□□ -2.05
Rnf220Q6PDX6 AC124104.1-201ENSMUST00000226279 417 ntBASIC2.22□□□□□ -2.05
Rnf220Q6PDX6 Gm24661-201ENSMUST00000083205 104 ntBASIC2.22□□□□□ -2.05
Rnf220Q6PDX6 Gm25628-201ENSMUST00000084002 105 ntBASIC2.22□□□□□ -2.05
Rnf220Q6PDX6 Olfr1450-202ENSMUST00000213587 2872 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
Rnf220Q6PDX6 AC133934.2-201ENSMUST00000221729 4129 ntBASIC2.22□□□□□ -2.05
Rnf220Q6PDX6 Gm33962-201ENSMUST00000182643 2592 ntBASIC2.21□□□□□ -2.06
Rnf220Q6PDX6 Gm23747-201ENSMUST00000104228 131 ntBASIC2.21□□□□□ -2.06
Rnf220Q6PDX6 Snord87-201ENSMUST00000175437 87 ntBASIC2.21□□□□□ -2.06
Rnf220Q6PDX6 Gm25464-201ENSMUST00000175481 107 ntBASIC2.21□□□□□ -2.06
Rnf220Q6PDX6 Olfr711-203ENSMUST00000216335 4724 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
Rnf220Q6PDX6 AC149294.9-201ENSMUST00000227256 164 ntBASIC2.21□□□□□ -2.06
Rnf220Q6PDX6 Gm24044-201ENSMUST00000083107 156 ntBASIC2.21□□□□□ -2.06
Rnf220Q6PDX6 n-R5s183-201ENSMUST00000083939 115 ntBASIC2.21□□□□□ -2.06
Rnf220Q6PDX6 Gm10203-201ENSMUST00000087348 198 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
Rnf220Q6PDX6 Gm6952-201ENSMUST00000118629 159 ntBASIC2.2□□□□□ -2.06
Rnf220Q6PDX6 Gm26215-201ENSMUST00000158584 139 ntBASIC2.2□□□□□ -2.06
Rnf220Q6PDX6 Gm27928-201ENSMUST00000183747 256 ntBASIC2.2□□□□□ -2.06
Rnf220Q6PDX6 Mir7k-201ENSMUST00000184115 110 ntBASIC2.2□□□□□ -2.06
Rnf220Q6PDX6 Trav7-6-202ENSMUST00000184687 275 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
Rnf220Q6PDX6 AC160863.1-201ENSMUST00000218412 317 ntBASIC2.2□□□□□ -2.06
Rnf220Q6PDX6 n-R5s40-201ENSMUST00000082475 124 ntBASIC2.2□□□□□ -2.06
Rnf220Q6PDX6 Gm25402-201ENSMUST00000082966 131 ntBASIC2.2□□□□□ -2.06
Rnf220Q6PDX6 Mir30d-201ENSMUST00000083503 82 ntBASIC2.2□□□□□ -2.06
Rnf220Q6PDX6 Gm24261-201ENSMUST00000083744 104 ntBASIC2.2□□□□□ -2.06
Rnf220Q6PDX6 Gm25627-201ENSMUST00000084003 153 ntBASIC2.2□□□□□ -2.06
Rnf220Q6PDX6 Gm14914-201ENSMUST00000117576 2031 ntBASIC2.2□□□□□ -2.06
Rnf220Q6PDX6 Gm14917-201ENSMUST00000118872 2105 ntBASIC2.2□□□□□ -2.06
Rnf220Q6PDX6 Gm6377-201ENSMUST00000060013 2793 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
Rnf220Q6PDX6 Gm12865-201ENSMUST00000137353 326 ntTSL 2 BASIC2.19□□□□□ -2.06
Rnf220Q6PDX6 Gm22538-201ENSMUST00000158169 299 ntBASIC2.19□□□□□ -2.06
Rnf220Q6PDX6 Gm24210-201ENSMUST00000158263 133 ntBASIC2.19□□□□□ -2.06
Rnf220Q6PDX6 Gm22476-201ENSMUST00000158902 100 ntBASIC2.19□□□□□ -2.06
Rnf220Q6PDX6 Gm3852-201ENSMUST00000182781 264 ntBASIC2.19□□□□□ -2.06
Rnf220Q6PDX6 Gm27379-201ENSMUST00000183730 123 ntBASIC2.19□□□□□ -2.06
Rnf220Q6PDX6 Gm44325-201ENSMUST00000196757 77 ntBASIC2.19□□□□□ -2.06
Rnf220Q6PDX6 Ptp4a1-206ENSMUST00000202889 135 ntTSL 2 BASIC2.19□□□□□ -2.06
Rnf220Q6PDX6 Hmgb1l-201ENSMUST00000082150 571 ntBASIC2.19□□□□□ -2.06
Rnf220Q6PDX6 Thoc2-201ENSMUST00000047037 7622 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
Rnf220Q6PDX6 Mir297a-2-201ENSMUST00000103795 90 ntBASIC2.18□□□□□ -2.06
Rnf220Q6PDX6 4930527E20Rik-201ENSMUST00000135700 351 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
Rnf220Q6PDX6 Gm15391-201ENSMUST00000147509 257 ntTSL 3 BASIC2.18□□□□□ -2.06
Rnf220Q6PDX6 Gm24212-201ENSMUST00000158258 132 ntBASIC2.18□□□□□ -2.06
Rnf220Q6PDX6 Gm26160-201ENSMUST00000158965 63 ntBASIC2.18□□□□□ -2.06
Rnf220Q6PDX6 Mir7013-201ENSMUST00000183540 72 ntBASIC2.18□□□□□ -2.06
Rnf220Q6PDX6 Mir7683-201ENSMUST00000183842 61 ntBASIC2.18□□□□□ -2.06
Rnf220Q6PDX6 Snora69-201ENSMUST00000083708 131 ntBASIC2.18□□□□□ -2.06
Rnf220Q6PDX6 Olfr1107-202ENSMUST00000214049 4388 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
Rnf220Q6PDX6 Gm11598-201ENSMUST00000119257 357 ntBASIC2.17□□□□□ -2.06
Rnf220Q6PDX6 Rhox11-ps3-201ENSMUST00000121166 233 ntBASIC2.17□□□□□ -2.06
Rnf220Q6PDX6 Gm24627-201ENSMUST00000122764 138 ntBASIC2.17□□□□□ -2.06
Rnf220Q6PDX6 Gm16510-201ENSMUST00000153501 249 ntBASIC2.17□□□□□ -2.06
Rnf220Q6PDX6 Gm23668-201ENSMUST00000157465 111 ntBASIC2.17□□□□□ -2.06
Rnf220Q6PDX6 Gm25658-201ENSMUST00000158472 128 ntBASIC2.17□□□□□ -2.06
Rnf220Q6PDX6 Gtpbp4-ps1-201ENSMUST00000184732 249 ntBASIC2.17□□□□□ -2.06
Rnf220Q6PDX6 Gm19790-201ENSMUST00000214414 251 ntBASIC2.17□□□□□ -2.06
Rnf220Q6PDX6 n-R5s176-201ENSMUST00000082683 109 ntBASIC2.17□□□□□ -2.06
Rnf220Q6PDX6 Mir682-201ENSMUST00000102281 96 ntBASIC2.16□□□□□ -2.06
Rnf220Q6PDX6 Gm25407-201ENSMUST00000104102 134 ntBASIC2.16□□□□□ -2.06
Rnf220Q6PDX6 Fau-ps1-201ENSMUST00000119675 252 ntBASIC2.16□□□□□ -2.06
Rnf220Q6PDX6 Gm16021-201ENSMUST00000121176 219 ntBASIC2.16□□□□□ -2.06
Rnf220Q6PDX6 Gm25910-201ENSMUST00000157620 140 ntBASIC2.16□□□□□ -2.06
Rnf220Q6PDX6 Gm25373-201ENSMUST00000158156 115 ntBASIC2.16□□□□□ -2.06
Rnf220Q6PDX6 Gm24769-201ENSMUST00000158506 129 ntBASIC2.16□□□□□ -2.06
Rnf220Q6PDX6 Gm24634-201ENSMUST00000158672 107 ntBASIC2.16□□□□□ -2.06
Rnf220Q6PDX6 Gm16404-201ENSMUST00000177739 468 ntBASIC2.16□□□□□ -2.06
Rnf220Q6PDX6 Gm14598-201ENSMUST00000180109 468 ntBASIC2.16□□□□□ -2.06
Rnf220Q6PDX6 Gm14625-201ENSMUST00000180231 468 ntBASIC2.16□□□□□ -2.06
Rnf220Q6PDX6 Mir6350-201ENSMUST00000183639 105 ntBASIC2.16□□□□□ -2.06
Rnf220Q6PDX6 Mir6993-201ENSMUST00000184912 65 ntBASIC2.16□□□□□ -2.06
Rnf220Q6PDX6 Gm44028-201ENSMUST00000205205 355 ntTSL 5 BASIC2.16□□□□□ -2.06
Rnf220Q6PDX6 Mir34a-201ENSMUST00000083559 102 ntBASIC2.16□□□□□ -2.06
Rnf220Q6PDX6 Olfr1098-202ENSMUST00000111574 2885 ntAPPRIS P1 TSL 3 BASIC2.16□□□□□ -2.06
Rnf220Q6PDX6 Gm24670-201ENSMUST00000104154 132 ntBASIC2.15□□□□□ -2.07
Rnf220Q6PDX6 Gm15281-201ENSMUST00000125181 351 ntBASIC2.15□□□□□ -2.07
Rnf220Q6PDX6 Gm23469-201ENSMUST00000157131 104 ntBASIC2.15□□□□□ -2.07
Rnf220Q6PDX6 Gm23898-201ENSMUST00000158111 103 ntBASIC2.15□□□□□ -2.07
Rnf220Q6PDX6 Mir3965-201ENSMUST00000175570 69 ntBASIC2.15□□□□□ -2.07
Rnf220Q6PDX6 Mir6419-201ENSMUST00000184784 113 ntBASIC2.15□□□□□ -2.07
Rnf220Q6PDX6 Gm28282-201ENSMUST00000186072 186 ntBASIC2.15□□□□□ -2.07
Rnf220Q6PDX6 Gm28537-201ENSMUST00000189026 315 ntBASIC2.15□□□□□ -2.07
Rnf220Q6PDX6 Gm29631-201ENSMUST00000191065 315 ntBASIC2.15□□□□□ -2.07
Rnf220Q6PDX6 AC134601.1-201ENSMUST00000221058 109 ntBASIC2.15□□□□□ -2.07
Rnf220Q6PDX6 AC124537.1-201ENSMUST00000222890 159 ntBASIC2.15□□□□□ -2.07
Rnf220Q6PDX6 Gm22249-201ENSMUST00000082485 136 ntBASIC2.15□□□□□ -2.07
Rnf220Q6PDX6 Mir218-1-201ENSMUST00000083669 110 ntBASIC2.15□□□□□ -2.07
Rnf220Q6PDX6 Zfp616-205ENSMUST00000178159 2964 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 128.8 ms