Protein–RNA interactions for Protein: Q6IRU2

Tpm4, Tropomyosin alpha-4 chain, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm4Q6IRU2 Gm25820-201ENSMUST00000198589 127 ntBASIC0.18□□□□□ -2.38
Tpm4Q6IRU2 Gm33654-201ENSMUST00000221704 215 ntBASIC0.18□□□□□ -2.38
Tpm4Q6IRU2 Gm23008-201ENSMUST00000158946 80 ntBASIC0.17□□□□□ -2.38
Tpm4Q6IRU2 Gm44726-201ENSMUST00000203427 217 ntBASIC0.17□□□□□ -2.38
Tpm4Q6IRU2 Gm45541-201ENSMUST00000210443 54 ntBASIC0.17□□□□□ -2.38
Tpm4Q6IRU2 AC109212.1-201ENSMUST00000215561 427 ntBASIC0.17□□□□□ -2.38
Tpm4Q6IRU2 2210407C18Rik-201ENSMUST00000048801 876 ntAPPRIS P1 TSL 1 (best) BASIC0.17□□□□□ -2.38
Tpm4Q6IRU2 Mir324-201ENSMUST00000083600 89 ntBASIC0.17□□□□□ -2.38
Tpm4Q6IRU2 Gm24283-201ENSMUST00000104233 107 ntBASIC0.16□□□□□ -2.38
Tpm4Q6IRU2 Gm16032-201ENSMUST00000118534 168 ntBASIC0.16□□□□□ -2.38
Tpm4Q6IRU2 Gm23838-201ENSMUST00000158067 162 ntBASIC0.16□□□□□ -2.38
Tpm4Q6IRU2 Gm22200-201ENSMUST00000158614 67 ntBASIC0.16□□□□□ -2.38
Tpm4Q6IRU2 Mir6346-201ENSMUST00000183982 81 ntBASIC0.16□□□□□ -2.38
Tpm4Q6IRU2 Gm27957-201ENSMUST00000184054 127 ntBASIC0.16□□□□□ -2.38
Tpm4Q6IRU2 Rpl23a-ps9-201ENSMUST00000188369 463 ntBASIC0.16□□□□□ -2.38
Tpm4Q6IRU2 Gm28288-201ENSMUST00000191019 214 ntBASIC0.16□□□□□ -2.38
Tpm4Q6IRU2 Rpl23a-ps11-201ENSMUST00000191583 463 ntBASIC0.16□□□□□ -2.38
Tpm4Q6IRU2 AC156794.1-201ENSMUST00000214415 214 ntTSL 5 BASIC0.16□□□□□ -2.38
Tpm4Q6IRU2 Gm23013-201ENSMUST00000104146 106 ntBASIC0.15□□□□□ -2.39
Tpm4Q6IRU2 Snord89-201ENSMUST00000104516 110 ntBASIC0.15□□□□□ -2.39
Tpm4Q6IRU2 Gm14536-201ENSMUST00000118324 138 ntBASIC0.15□□□□□ -2.39
Tpm4Q6IRU2 Gm15027-201ENSMUST00000120922 138 ntBASIC0.15□□□□□ -2.39
Tpm4Q6IRU2 Gm6985-201ENSMUST00000121255 271 ntBASIC0.15□□□□□ -2.39
Tpm4Q6IRU2 Gm24500-201ENSMUST00000158447 124 ntBASIC0.15□□□□□ -2.39
Tpm4Q6IRU2 Gm44211-201ENSMUST00000204867 145 ntBASIC0.15□□□□□ -2.39
Tpm4Q6IRU2 AC117202.2-201ENSMUST00000226491 1101 ntBASIC0.15□□□□□ -2.39
Tpm4Q6IRU2 Gm23448-201ENSMUST00000083151 104 ntBASIC0.15□□□□□ -2.39
Tpm4Q6IRU2 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC0.15□□□□□ -2.39
Tpm4Q6IRU2 Gm20939-201ENSMUST00000108007 1572 ntAPPRIS P1 TSL 5 BASIC0.15□□□□□ -2.39
Tpm4Q6IRU2 Gm26135-201ENSMUST00000101993 72 ntBASIC0.14□□□□□ -2.39
Tpm4Q6IRU2 Mir710-201ENSMUST00000102088 110 ntBASIC0.14□□□□□ -2.39
Tpm4Q6IRU2 Trbv17-201ENSMUST00000103275 374 ntAPPRIS P1 BASIC0.14□□□□□ -2.39
Tpm4Q6IRU2 Gm22673-201ENSMUST00000104415 131 ntBASIC0.14□□□□□ -2.39
Tpm4Q6IRU2 Gm23321-201ENSMUST00000104465 126 ntBASIC0.14□□□□□ -2.39
Tpm4Q6IRU2 Mir880-201ENSMUST00000104809 78 ntBASIC0.14□□□□□ -2.39
Tpm4Q6IRU2 Gm13059-201ENSMUST00000119881 398 ntBASIC0.14□□□□□ -2.39
Tpm4Q6IRU2 Gm16539-201ENSMUST00000160086 327 ntBASIC0.14□□□□□ -2.39
Tpm4Q6IRU2 Gm22914-201ENSMUST00000175195 77 ntBASIC0.14□□□□□ -2.39
Tpm4Q6IRU2 Snord50b-201ENSMUST00000178497 72 ntBASIC0.14□□□□□ -2.39
Tpm4Q6IRU2 Smr2-203ENSMUST00000196477 676 ntAPPRIS ALT2 TSL 1 (best) BASIC0.14□□□□□ -2.39
Tpm4Q6IRU2 Smr2-204ENSMUST00000199635 680 ntAPPRIS ALT2 TSL 1 (best) BASIC0.14□□□□□ -2.39
Tpm4Q6IRU2 Gm24616-201ENSMUST00000083274 139 ntBASIC0.14□□□□□ -2.39
Tpm4Q6IRU2 Olfr790-203ENSMUST00000215067 2659 ntAPPRIS P1 TSL 5 BASIC0.13□□□□□ -2.39
Tpm4Q6IRU2 Gm17132-201ENSMUST00000109542 1158 ntBASIC0.13□□□□□ -2.39
Tpm4Q6IRU2 Gm12225-201ENSMUST00000117995 298 ntBASIC0.13□□□□□ -2.39
Tpm4Q6IRU2 Gm23016-201ENSMUST00000158431 62 ntBASIC0.13□□□□□ -2.39
Tpm4Q6IRU2 Scarna3a-201ENSMUST00000158911 140 ntBASIC0.13□□□□□ -2.39
Tpm4Q6IRU2 Obox4-ps37-201ENSMUST00000177223 276 ntBASIC0.13□□□□□ -2.39
Tpm4Q6IRU2 Gm37997-201ENSMUST00000193515 267 ntBASIC0.13□□□□□ -2.39
Tpm4Q6IRU2 Gm42506-201ENSMUST00000202009 150 ntBASIC0.13□□□□□ -2.39
Tpm4Q6IRU2 Gm23377-201ENSMUST00000082943 126 ntBASIC0.13□□□□□ -2.39
Tpm4Q6IRU2 Mir448-201ENSMUST00000083516 112 ntBASIC0.13□□□□□ -2.39
Tpm4Q6IRU2 Gm382-201ENSMUST00000096332 4070 ntAPPRIS P1 TSL 1 (best) BASIC0.13□□□□□ -2.39
Tpm4Q6IRU2 Gm14491-201ENSMUST00000121919 199 ntBASIC0.12□□□□□ -2.39
Tpm4Q6IRU2 Gm22447-201ENSMUST00000158155 92 ntBASIC0.12□□□□□ -2.39
Tpm4Q6IRU2 Mir1931-201ENSMUST00000158589 119 ntBASIC0.12□□□□□ -2.39
Tpm4Q6IRU2 Gm23024-201ENSMUST00000158770 292 ntBASIC0.12□□□□□ -2.39
Tpm4Q6IRU2 Gm16546-201ENSMUST00000159442 355 ntBASIC0.12□□□□□ -2.39
Tpm4Q6IRU2 Gm21060-201ENSMUST00000179346 168 ntAPPRIS P1 BASIC0.12□□□□□ -2.39
Tpm4Q6IRU2 Gm26180-201ENSMUST00000179942 107 ntBASIC0.12□□□□□ -2.39
Tpm4Q6IRU2 AC166358.10-201ENSMUST00000220556 144 ntBASIC0.12□□□□□ -2.39
Tpm4Q6IRU2 Gm26164-201ENSMUST00000083793 104 ntBASIC0.12□□□□□ -2.39
Tpm4Q6IRU2 Trgj3-201ENSMUST00000103562 60 ntAPPRIS P1 BASIC0.11□□□□□ -2.39
Tpm4Q6IRU2 Gm25170-201ENSMUST00000104191 129 ntBASIC0.11□□□□□ -2.39
Tpm4Q6IRU2 n-R5s18-201ENSMUST00000122740 121 ntBASIC0.11□□□□□ -2.39
Tpm4Q6IRU2 Gm26022-201ENSMUST00000158663 108 ntBASIC0.11□□□□□ -2.39
Tpm4Q6IRU2 Gm23182-201ENSMUST00000158688 135 ntBASIC0.11□□□□□ -2.39
Tpm4Q6IRU2 Olfr797-ps1-201ENSMUST00000203614 415 ntBASIC0.11□□□□□ -2.39
Tpm4Q6IRU2 Gm8219-201ENSMUST00000218309 242 ntBASIC0.11□□□□□ -2.39
Tpm4Q6IRU2 Gm18113-201ENSMUST00000220630 303 ntBASIC0.11□□□□□ -2.39
Tpm4Q6IRU2 Gm24042-201ENSMUST00000083114 103 ntBASIC0.11□□□□□ -2.39
Tpm4Q6IRU2 Mir34a-201ENSMUST00000083559 102 ntBASIC0.11□□□□□ -2.39
Tpm4Q6IRU2 AC159625.1-201ENSMUST00000220994 2625 ntBASIC0.1□□□□□ -2.39
Tpm4Q6IRU2 Ighv1-47-201ENSMUST00000103518 294 ntAPPRIS P1 BASIC0.1□□□□□ -2.39
Tpm4Q6IRU2 Gm24833-201ENSMUST00000116775 120 ntBASIC0.1□□□□□ -2.39
Tpm4Q6IRU2 Gm14287-201ENSMUST00000121060 117 ntBASIC0.1□□□□□ -2.39
Tpm4Q6IRU2 Gm23232-201ENSMUST00000157300 105 ntBASIC0.1□□□□□ -2.39
Tpm4Q6IRU2 Gm23584-201ENSMUST00000157655 129 ntBASIC0.1□□□□□ -2.39
Tpm4Q6IRU2 Gm25838-201ENSMUST00000158920 120 ntBASIC0.1□□□□□ -2.39
Tpm4Q6IRU2 Gm28541-201ENSMUST00000185206 442 ntTSL 5 BASIC0.1□□□□□ -2.39
Tpm4Q6IRU2 Gm28585-201ENSMUST00000187587 442 ntTSL 5 BASIC0.1□□□□□ -2.39
Tpm4Q6IRU2 Gm28811-201ENSMUST00000190650 442 ntTSL 5 BASIC0.1□□□□□ -2.39
Tpm4Q6IRU2 Olfr277-ps1-201ENSMUST00000205749 285 ntBASIC0.1□□□□□ -2.39
Tpm4Q6IRU2 AC165092.3-201ENSMUST00000223602 282 ntBASIC0.1□□□□□ -2.39
Tpm4Q6IRU2 Mir30c-2-201ENSMUST00000083633 84 ntBASIC0.1□□□□□ -2.39
Tpm4Q6IRU2 Gm10217-201ENSMUST00000088080 135 ntAPPRIS P1 TSL 5 BASIC0.1□□□□□ -2.39
Tpm4Q6IRU2 Gm26424-201ENSMUST00000122530 104 ntBASIC0.09□□□□□ -2.4
Tpm4Q6IRU2 Gm22113-201ENSMUST00000158343 104 ntBASIC0.09□□□□□ -2.4
Tpm4Q6IRU2 Gm23853-201ENSMUST00000158375 104 ntBASIC0.09□□□□□ -2.4
Tpm4Q6IRU2 Gm26335-201ENSMUST00000178449 107 ntBASIC0.09□□□□□ -2.4
Tpm4Q6IRU2 Gm37468-201ENSMUST00000194767 854 ntTSL 1 (best) BASIC0.09□□□□□ -2.4
Tpm4Q6IRU2 Gm44063-201ENSMUST00000203307 376 ntBASIC0.09□□□□□ -2.4
Tpm4Q6IRU2 AC124182.1-201ENSMUST00000227091 321 ntBASIC0.09□□□□□ -2.4
Tpm4Q6IRU2 Gm14413-201ENSMUST00000122158 408 ntBASIC0.08□□□□□ -2.4
Tpm4Q6IRU2 Gm24015-201ENSMUST00000157725 232 ntBASIC0.08□□□□□ -2.4
Tpm4Q6IRU2 Gm24241-201ENSMUST00000157787 145 ntBASIC0.08□□□□□ -2.4
Tpm4Q6IRU2 Gm22520-201ENSMUST00000158269 129 ntBASIC0.08□□□□□ -2.4
Tpm4Q6IRU2 Mir3108-201ENSMUST00000175500 79 ntBASIC0.08□□□□□ -2.4
Tpm4Q6IRU2 Gm6657-203ENSMUST00000188791 531 ntAPPRIS ALT2 TSL 5 BASIC0.08□□□□□ -2.4
Tpm4Q6IRU2 Gm29014-201ENSMUST00000191422 326 ntBASIC0.08□□□□□ -2.4
Retrieved 100 of 76,532 protein–RNA pairs in 82.1 ms