Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Olfr935-202ENSMUST00000214157 1693 ntAPPRIS P1 TSL 3 BASIC2.14□□□□□ -2.07
Ift88Q61371 AL645643.1-201ENSMUST00000222438 3897 ntBASIC2.14□□□□□ -2.07
Ift88Q61371 Tra2b-ps-201ENSMUST00000119906 168 ntBASIC2.13□□□□□ -2.07
Ift88Q61371 Gm25825-201ENSMUST00000157091 124 ntBASIC2.13□□□□□ -2.07
Ift88Q61371 Gm23390-201ENSMUST00000157393 106 ntBASIC2.13□□□□□ -2.07
Ift88Q61371 Trav5n-3-201ENSMUST00000164511 270 ntBASIC2.13□□□□□ -2.07
Ift88Q61371 Mir669k-201ENSMUST00000177742 127 ntBASIC2.13□□□□□ -2.07
Ift88Q61371 Gm25673-201ENSMUST00000179957 127 ntBASIC2.13□□□□□ -2.07
Ift88Q61371 Gm27544-201ENSMUST00000185069 155 ntBASIC2.13□□□□□ -2.07
Ift88Q61371 Gm37557-201ENSMUST00000191640 139 ntBASIC2.13□□□□□ -2.07
Ift88Q61371 Snord43-201ENSMUST00000199549 108 ntBASIC2.13□□□□□ -2.07
Ift88Q61371 Gm44477-201ENSMUST00000199661 110 ntBASIC2.13□□□□□ -2.07
Ift88Q61371 AC144671.1-201ENSMUST00000215265 99 ntBASIC2.13□□□□□ -2.07
Ift88Q61371 Gm25090-201ENSMUST00000104000 132 ntBASIC2.12□□□□□ -2.07
Ift88Q61371 Gm24132-201ENSMUST00000104745 91 ntBASIC2.12□□□□□ -2.07
Ift88Q61371 Gm22051-201ENSMUST00000117002 127 ntBASIC2.12□□□□□ -2.07
Ift88Q61371 Gm24851-201ENSMUST00000158028 103 ntBASIC2.12□□□□□ -2.07
Ift88Q61371 Gm17677-201ENSMUST00000166746 351 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
Ift88Q61371 Gm20477-201ENSMUST00000174028 280 ntBASIC2.12□□□□□ -2.07
Ift88Q61371 Gm27443-201ENSMUST00000184660 98 ntBASIC2.12□□□□□ -2.07
Ift88Q61371 Ighv1-1-201ENSMUST00000194912 291 ntBASIC2.12□□□□□ -2.07
Ift88Q61371 Gm43021-201ENSMUST00000198692 337 ntTSL 3 BASIC2.12□□□□□ -2.07
Ift88Q61371 CT010449.1-201ENSMUST00000220624 153 ntBASIC2.12□□□□□ -2.07
Ift88Q61371 AC129202.1-201ENSMUST00000224895 526 ntBASIC2.12□□□□□ -2.07
Ift88Q61371 Mir151-201ENSMUST00000083678 68 ntBASIC2.12□□□□□ -2.07
Ift88Q61371 Gm25094-201ENSMUST00000103992 131 ntBASIC2.11□□□□□ -2.07
Ift88Q61371 Gm22674-201ENSMUST00000104413 131 ntBASIC2.11□□□□□ -2.07
Ift88Q61371 Gm22494-201ENSMUST00000104495 128 ntBASIC2.11□□□□□ -2.07
Ift88Q61371 Gm16328-201ENSMUST00000126985 196 ntBASIC2.11□□□□□ -2.07
Ift88Q61371 Gm22279-201ENSMUST00000157200 93 ntBASIC2.11□□□□□ -2.07
Ift88Q61371 Gm25994-201ENSMUST00000175392 101 ntBASIC2.11□□□□□ -2.07
Ift88Q61371 Gm38183-201ENSMUST00000193189 205 ntBASIC2.11□□□□□ -2.07
Ift88Q61371 Gm24044-201ENSMUST00000083107 156 ntBASIC2.11□□□□□ -2.07
Ift88Q61371 Mir471-201ENSMUST00000093596 67 ntBASIC2.11□□□□□ -2.07
Ift88Q61371 Agmo-201ENSMUST00000049874 2423 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
Ift88Q61371 n-R5s200-201ENSMUST00000104194 113 ntBASIC2.1□□□□□ -2.07
Ift88Q61371 Gm25529-201ENSMUST00000104850 92 ntBASIC2.1□□□□□ -2.07
Ift88Q61371 Gm24478-201ENSMUST00000157439 158 ntBASIC2.1□□□□□ -2.07
Ift88Q61371 Gm22586-201ENSMUST00000157507 122 ntBASIC2.1□□□□□ -2.07
Ift88Q61371 Gm29347-201ENSMUST00000186695 449 ntTSL 3 BASIC2.1□□□□□ -2.07
Ift88Q61371 Gm6003-201ENSMUST00000187903 463 ntBASIC2.1□□□□□ -2.07
Ift88Q61371 Gm43865-201ENSMUST00000204721 127 ntBASIC2.1□□□□□ -2.07
Ift88Q61371 Gm25895-201ENSMUST00000083714 100 ntBASIC2.1□□□□□ -2.07
Ift88Q61371 Gm10234-201ENSMUST00000089304 60 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
Ift88Q61371 Snhg14-213ENSMUST00000190666 3708 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
Ift88Q61371 Gm26339-201ENSMUST00000102368 99 ntBASIC2.09□□□□□ -2.07
Ift88Q61371 Gm24907-201ENSMUST00000116932 128 ntBASIC2.09□□□□□ -2.07
Ift88Q61371 Gm12801-201ENSMUST00000153228 263 ntTSL 3 BASIC2.09□□□□□ -2.07
Ift88Q61371 Gm23469-201ENSMUST00000157131 104 ntBASIC2.09□□□□□ -2.07
Ift88Q61371 Gm22554-201ENSMUST00000157798 147 ntBASIC2.09□□□□□ -2.07
Ift88Q61371 Gm25223-201ENSMUST00000158200 110 ntBASIC2.09□□□□□ -2.07
Ift88Q61371 Gm24668-201ENSMUST00000158935 104 ntBASIC2.09□□□□□ -2.07
Ift88Q61371 Gm23370-201ENSMUST00000199545 130 ntBASIC2.09□□□□□ -2.07
Ift88Q61371 Gm25402-201ENSMUST00000082966 131 ntBASIC2.09□□□□□ -2.07
Ift88Q61371 Mir107-201ENSMUST00000083660 87 ntBASIC2.09□□□□□ -2.07
Ift88Q61371 Snora33-201ENSMUST00000093556 129 ntBASIC2.09□□□□□ -2.07
Ift88Q61371 Gm21876-201ENSMUST00000096511 282 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
Ift88Q61371 Olfr1448-203ENSMUST00000213713 4336 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.08
Ift88Q61371 Slco6c1-201ENSMUST00000027569 2747 ntAPPRIS P2 TSL 1 (best) BASIC2.08□□□□□ -2.08
Ift88Q61371 Ppp4r3c-ps-201ENSMUST00000151416 2445 ntBASIC2.08□□□□□ -2.08
Ift88Q61371 Mir1949-201ENSMUST00000157434 141 ntBASIC2.08□□□□□ -2.08
Ift88Q61371 Gm23043-201ENSMUST00000157890 109 ntBASIC2.08□□□□□ -2.08
Ift88Q61371 Mir3086-201ENSMUST00000175072 87 ntBASIC2.08□□□□□ -2.08
Ift88Q61371 Gm27465-201ENSMUST00000184290 91 ntBASIC2.08□□□□□ -2.08
Ift88Q61371 Gm28912-201ENSMUST00000189001 234 ntBASIC2.08□□□□□ -2.08
Ift88Q61371 Gm46993-201ENSMUST00000220708 259 ntBASIC2.08□□□□□ -2.08
Ift88Q61371 AC120540.2-201ENSMUST00000221716 387 ntBASIC2.08□□□□□ -2.08
Ift88Q61371 AC124182.1-201ENSMUST00000227091 321 ntBASIC2.08□□□□□ -2.08
Ift88Q61371 Zfp966-201ENSMUST00000108949 2939 ntAPPRIS P1 TSL 3 BASIC2.08□□□□□ -2.08
Ift88Q61371 Gm19194-201ENSMUST00000192015 3774 ntBASIC2.07□□□□□ -2.08
Ift88Q61371 Gm24984-201ENSMUST00000104454 133 ntBASIC2.07□□□□□ -2.08
Ift88Q61371 Gm25113-201ENSMUST00000157185 143 ntBASIC2.07□□□□□ -2.08
Ift88Q61371 Gm24783-201ENSMUST00000157639 100 ntBASIC2.07□□□□□ -2.08
Ift88Q61371 Gm25051-201ENSMUST00000158602 249 ntBASIC2.07□□□□□ -2.08
Ift88Q61371 Gm24656-201ENSMUST00000177548 132 ntBASIC2.07□□□□□ -2.08
Ift88Q61371 Mir6481-201ENSMUST00000184617 110 ntBASIC2.07□□□□□ -2.08
Ift88Q61371 Gm28434-201ENSMUST00000187738 500 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
Ift88Q61371 Gm43199-201ENSMUST00000200019 307 ntBASIC2.07□□□□□ -2.08
Ift88Q61371 AC154994.1-201ENSMUST00000217395 302 ntBASIC2.07□□□□□ -2.08
Ift88Q61371 Gm10139-201ENSMUST00000081471 171 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
Ift88Q61371 Gm26204-201ENSMUST00000082906 107 ntBASIC2.07□□□□□ -2.08
Ift88Q61371 Olfr974-202ENSMUST00000213246 3561 ntAPPRIS P1 TSL 2 BASIC2.07□□□□□ -2.08
Ift88Q61371 Gm14405-201ENSMUST00000117808 2330 ntBASIC2.07□□□□□ -2.08
Ift88Q61371 Zfp788-207ENSMUST00000170770 2499 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
Ift88Q61371 Snord89-201ENSMUST00000104516 110 ntBASIC2.06□□□□□ -2.08
Ift88Q61371 Snord72-201ENSMUST00000104549 81 ntBASIC2.06□□□□□ -2.08
Ift88Q61371 Gm14937-201ENSMUST00000119709 208 ntBASIC2.06□□□□□ -2.08
Ift88Q61371 Gm6025-201ENSMUST00000121517 201 ntBASIC2.06□□□□□ -2.08
Ift88Q61371 Gm12865-201ENSMUST00000137353 326 ntTSL 2 BASIC2.06□□□□□ -2.08
Ift88Q61371 Mir6901-201ENSMUST00000185062 62 ntBASIC2.06□□□□□ -2.08
Ift88Q61371 Gm29308-201ENSMUST00000188863 315 ntBASIC2.06□□□□□ -2.08
Ift88Q61371 Gm44052-201ENSMUST00000203382 396 ntBASIC2.06□□□□□ -2.08
Ift88Q61371 Gm44966-201ENSMUST00000208096 157 ntBASIC2.06□□□□□ -2.08
Ift88Q61371 Snord47-201ENSMUST00000083034 77 ntBASIC2.06□□□□□ -2.08
Ift88Q61371 Olfr1151-202ENSMUST00000217376 2866 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
Ift88Q61371 Gm27047-201ENSMUST00000183072 1819 ntBASIC2.05□□□□□ -2.08
Ift88Q61371 Trdj2-201ENSMUST00000103683 59 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
Ift88Q61371 Mir344e-201ENSMUST00000104677 66 ntBASIC2.05□□□□□ -2.08
Ift88Q61371 Gm10959-201ENSMUST00000106431 72 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
Ift88Q61371 Gm14536-201ENSMUST00000118324 138 ntBASIC2.05□□□□□ -2.08
Retrieved 100 of 76,532 protein–RNA pairs in 82.8 ms