Protein–RNA interactions for Protein: Q61164

Ctcf, Transcriptional repressor CTCF, mousemouse

Known RBP Predictions only

Length 736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtcfQ61164 Gm24131-201ENSMUST00000158539 107 ntBASIC2.23□□□□□ -2.05
CtcfQ61164 Gm23714-201ENSMUST00000179259 105 ntBASIC2.23□□□□□ -2.05
CtcfQ61164 Gm44477-201ENSMUST00000199661 110 ntBASIC2.23□□□□□ -2.05
CtcfQ61164 CU062626.2-201ENSMUST00000223953 274 ntBASIC2.23□□□□□ -2.05
CtcfQ61164 Mir302d-201ENSMUST00000083513 66 ntBASIC2.23□□□□□ -2.05
CtcfQ61164 Gm44527-201ENSMUST00000182210 2945 ntTSL 2 BASIC2.23□□□□□ -2.05
CtcfQ61164 Gm15281-201ENSMUST00000125181 351 ntBASIC2.22□□□□□ -2.05
CtcfQ61164 Gm25059-201ENSMUST00000157367 117 ntBASIC2.22□□□□□ -2.05
CtcfQ61164 Gm25460-201ENSMUST00000157954 127 ntBASIC2.22□□□□□ -2.05
CtcfQ61164 Gm26482-201ENSMUST00000158015 62 ntBASIC2.22□□□□□ -2.05
CtcfQ61164 Mir466b-1-201ENSMUST00000177988 82 ntBASIC2.22□□□□□ -2.05
CtcfQ61164 Gm27793-201ENSMUST00000183405 76 ntBASIC2.22□□□□□ -2.05
CtcfQ61164 Gm27898-201ENSMUST00000183987 80 ntBASIC2.22□□□□□ -2.05
CtcfQ61164 Gm28076-201ENSMUST00000188337 410 ntTSL 3 BASIC2.22□□□□□ -2.05
CtcfQ61164 Gm44352-201ENSMUST00000196358 110 ntBASIC2.22□□□□□ -2.05
CtcfQ61164 Gm44482-201ENSMUST00000199232 103 ntBASIC2.22□□□□□ -2.05
CtcfQ61164 Gm2511-201ENSMUST00000205521 457 ntTSL 3 BASIC2.22□□□□□ -2.05
CtcfQ61164 Gm45386-201ENSMUST00000210194 218 ntBASIC2.22□□□□□ -2.05
CtcfQ61164 AC122428.1-201ENSMUST00000213709 217 ntTSL 3 BASIC2.22□□□□□ -2.05
CtcfQ61164 AC141895.1-201ENSMUST00000218141 273 ntBASIC2.22□□□□□ -2.05
CtcfQ61164 AC101945.1-201ENSMUST00000226734 466 ntBASIC2.22□□□□□ -2.05
CtcfQ61164 Gm25589-201ENSMUST00000082502 166 ntBASIC2.22□□□□□ -2.05
CtcfQ61164 Gm25813-201ENSMUST00000082748 191 ntBASIC2.22□□□□□ -2.05
CtcfQ61164 Gm25789-201ENSMUST00000083294 76 ntBASIC2.22□□□□□ -2.05
CtcfQ61164 Gpr174-207ENSMUST00000178838 4955 ntAPPRIS P1 TSL 2 BASIC2.22□□□□□ -2.05
CtcfQ61164 Gm24283-201ENSMUST00000104233 107 ntBASIC2.21□□□□□ -2.06
CtcfQ61164 2210418O10Rik-202ENSMUST00000135430 195 ntTSL 5 BASIC2.21□□□□□ -2.06
CtcfQ61164 Gm23469-201ENSMUST00000157131 104 ntBASIC2.21□□□□□ -2.06
CtcfQ61164 Gm24015-201ENSMUST00000157725 232 ntBASIC2.21□□□□□ -2.06
CtcfQ61164 Gm24010-201ENSMUST00000157731 282 ntBASIC2.21□□□□□ -2.06
CtcfQ61164 Gm17161-201ENSMUST00000169187 524 ntBASIC2.21□□□□□ -2.06
CtcfQ61164 Vmn2r-ps20-201ENSMUST00000179853 382 ntBASIC2.21□□□□□ -2.06
CtcfQ61164 Mir1a-2-201ENSMUST00000198520 72 ntBASIC2.21□□□□□ -2.06
CtcfQ61164 AC153646.2-201ENSMUST00000220516 109 ntBASIC2.21□□□□□ -2.06
CtcfQ61164 AC165138.1-201ENSMUST00000226984 270 ntBASIC2.21□□□□□ -2.06
CtcfQ61164 Gm24977-201ENSMUST00000083106 163 ntBASIC2.21□□□□□ -2.06
CtcfQ61164 Vmn1r178-202ENSMUST00000226450 2880 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
CtcfQ61164 Snhg14-209ENSMUST00000188976 2193 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
CtcfQ61164 Gm26157-201ENSMUST00000158974 126 ntBASIC2.2□□□□□ -2.06
CtcfQ61164 Mir28b-201ENSMUST00000175399 80 ntBASIC2.2□□□□□ -2.06
CtcfQ61164 Gtpbp4-ps1-201ENSMUST00000184732 249 ntBASIC2.2□□□□□ -2.06
CtcfQ61164 Gm37146-201ENSMUST00000192572 463 ntTSL 3 BASIC2.2□□□□□ -2.06
CtcfQ61164 AC173345.2-201ENSMUST00000222795 153 ntBASIC2.2□□□□□ -2.06
CtcfQ61164 AC183092.1-201ENSMUST00000224301 153 ntBASIC2.2□□□□□ -2.06
CtcfQ61164 Gm11351-202ENSMUST00000225724 478 ntBASIC2.2□□□□□ -2.06
CtcfQ61164 Mir322-201ENSMUST00000083484 95 ntBASIC2.2□□□□□ -2.06
CtcfQ61164 Mir107-201ENSMUST00000083660 87 ntBASIC2.2□□□□□ -2.06
CtcfQ61164 Lipi-201ENSMUST00000062721 2082 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
CtcfQ61164 Ppp1r3a-201ENSMUST00000045096 6965 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
CtcfQ61164 Ifi214-203ENSMUST00000139092 2888 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
CtcfQ61164 Gm13797-201ENSMUST00000121792 120 ntBASIC2.19□□□□□ -2.06
CtcfQ61164 Gm24896-201ENSMUST00000122741 135 ntBASIC2.19□□□□□ -2.06
CtcfQ61164 Gm24440-201ENSMUST00000157236 63 ntBASIC2.19□□□□□ -2.06
CtcfQ61164 Gm22338-201ENSMUST00000157715 129 ntBASIC2.19□□□□□ -2.06
CtcfQ61164 Gm23342-201ENSMUST00000158958 115 ntBASIC2.19□□□□□ -2.06
CtcfQ61164 Gm24512-201ENSMUST00000174963 65 ntBASIC2.19□□□□□ -2.06
CtcfQ61164 Gm25071-201ENSMUST00000175232 70 ntBASIC2.19□□□□□ -2.06
CtcfQ61164 Gm28992-201ENSMUST00000190534 139 ntBASIC2.19□□□□□ -2.06
CtcfQ61164 Mir721-201ENSMUST00000200230 88 ntBASIC2.19□□□□□ -2.06
CtcfQ61164 CT009696.2-201ENSMUST00000216668 432 ntBASIC2.19□□□□□ -2.06
CtcfQ61164 AC154994.1-201ENSMUST00000217395 302 ntBASIC2.19□□□□□ -2.06
CtcfQ61164 AC125488.1-201ENSMUST00000219586 212 ntBASIC2.19□□□□□ -2.06
CtcfQ61164 Gm46993-201ENSMUST00000220708 259 ntBASIC2.19□□□□□ -2.06
CtcfQ61164 Gm25634-201ENSMUST00000082667 105 ntBASIC2.19□□□□□ -2.06
CtcfQ61164 Gm22972-201ENSMUST00000083297 131 ntBASIC2.19□□□□□ -2.06
CtcfQ61164 Skint5-203ENSMUST00000170105 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.18□□□□□ -2.06
CtcfQ61164 Tra2b-ps-201ENSMUST00000119906 168 ntBASIC2.18□□□□□ -2.06
CtcfQ61164 Gm12926-201ENSMUST00000121158 409 ntBASIC2.18□□□□□ -2.06
CtcfQ61164 Gm24598-201ENSMUST00000122510 74 ntBASIC2.18□□□□□ -2.06
CtcfQ61164 Gm24237-201ENSMUST00000157790 132 ntBASIC2.18□□□□□ -2.06
CtcfQ61164 Gm21885-201ENSMUST00000178891 327 ntBASIC2.18□□□□□ -2.06
CtcfQ61164 Gm21060-201ENSMUST00000179346 168 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
CtcfQ61164 Gm23966-201ENSMUST00000179823 107 ntBASIC2.18□□□□□ -2.06
CtcfQ61164 Gm43865-201ENSMUST00000204721 127 ntBASIC2.18□□□□□ -2.06
CtcfQ61164 Gm18213-201ENSMUST00000207850 178 ntBASIC2.18□□□□□ -2.06
CtcfQ61164 Hmgb1l-201ENSMUST00000082150 571 ntBASIC2.18□□□□□ -2.06
CtcfQ61164 Gm25130-201ENSMUST00000082650 156 ntBASIC2.18□□□□□ -2.06
CtcfQ61164 Trdn-201ENSMUST00000095762 4514 ntAPPRIS P2 TSL 5 BASIC2.18□□□□□ -2.06
CtcfQ61164 Gm43753-201ENSMUST00000196539 3309 ntBASIC2.18□□□□□ -2.06
CtcfQ61164 Gm23950-201ENSMUST00000104026 129 ntBASIC2.17□□□□□ -2.06
CtcfQ61164 Gm22494-201ENSMUST00000104495 128 ntBASIC2.17□□□□□ -2.06
CtcfQ61164 Gm15067-201ENSMUST00000119534 156 ntBASIC2.17□□□□□ -2.06
CtcfQ61164 Gm12143-201ENSMUST00000119666 332 ntBASIC2.17□□□□□ -2.06
CtcfQ61164 n-R5s164-201ENSMUST00000122664 112 ntBASIC2.17□□□□□ -2.06
CtcfQ61164 Gm10722-201ENSMUST00000151376 651 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
CtcfQ61164 Gm25658-201ENSMUST00000158472 128 ntBASIC2.17□□□□□ -2.06
CtcfQ61164 Mir1936-201ENSMUST00000158699 93 ntBASIC2.17□□□□□ -2.06
CtcfQ61164 Gm17490-201ENSMUST00000166779 63 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
CtcfQ61164 Gm17020-201ENSMUST00000172274 274 ntBASIC2.17□□□□□ -2.06
CtcfQ61164 Mir7026-201ENSMUST00000184384 67 ntBASIC2.17□□□□□ -2.06
CtcfQ61164 Gm27544-201ENSMUST00000185069 155 ntBASIC2.17□□□□□ -2.06
CtcfQ61164 Gm33866-201ENSMUST00000196911 289 ntBASIC2.17□□□□□ -2.06
CtcfQ61164 Snord43-201ENSMUST00000199549 108 ntBASIC2.17□□□□□ -2.06
CtcfQ61164 AC122242.1-201ENSMUST00000224650 304 ntBASIC2.17□□□□□ -2.06
CtcfQ61164 Ppp4r3c-ps-201ENSMUST00000151416 2445 ntBASIC2.17□□□□□ -2.06
CtcfQ61164 Gm26135-201ENSMUST00000101993 72 ntBASIC2.16□□□□□ -2.06
CtcfQ61164 Gm23858-201ENSMUST00000158384 106 ntBASIC2.16□□□□□ -2.06
CtcfQ61164 Gm23548-201ENSMUST00000158963 106 ntBASIC2.16□□□□□ -2.06
CtcfQ61164 Snord50b-201ENSMUST00000178497 72 ntBASIC2.16□□□□□ -2.06
CtcfQ61164 Gm28344-201ENSMUST00000185704 279 ntBASIC2.16□□□□□ -2.06
Retrieved 100 of 76,532 protein–RNA pairs in 85.9 ms