Protein–RNA interactions for Protein: Q61069

Usf1, Upstream stimulatory factor 1, mousemouse

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usf1Q61069 Mir181a-1-201ENSMUST00000083631 87 ntBASIC1.07□□□□□ -2.24
Usf1Q61069 Gm24494-201ENSMUST00000083804 81 ntBASIC1.07□□□□□ -2.24
Usf1Q61069 Gm42718-201ENSMUST00000197319 2681 ntBASIC1.07□□□□□ -2.24
Usf1Q61069 Gm12080-201ENSMUST00000119821 1883 ntBASIC1.07□□□□□ -2.24
Usf1Q61069 Gm26135-201ENSMUST00000101993 72 ntBASIC1.06□□□□□ -2.24
Usf1Q61069 Gm22469-201ENSMUST00000104118 133 ntBASIC1.06□□□□□ -2.24
Usf1Q61069 Gm22021-201ENSMUST00000104353 107 ntBASIC1.06□□□□□ -2.24
Usf1Q61069 Gm10945-201ENSMUST00000105596 60 ntAPPRIS P1 TSL 5 BASIC1.06□□□□□ -2.24
Usf1Q61069 Gm14307-201ENSMUST00000118930 291 ntBASIC1.06□□□□□ -2.24
Usf1Q61069 Gm14297-201ENSMUST00000129110 291 ntBASIC1.06□□□□□ -2.24
Usf1Q61069 Gm16362-201ENSMUST00000135189 214 ntBASIC1.06□□□□□ -2.24
Usf1Q61069 Gm25884-201ENSMUST00000157782 62 ntBASIC1.06□□□□□ -2.24
Usf1Q61069 Gm23262-201ENSMUST00000158323 168 ntBASIC1.06□□□□□ -2.24
Usf1Q61069 Gm23419-201ENSMUST00000175523 84 ntBASIC1.06□□□□□ -2.24
Usf1Q61069 Snord50b-201ENSMUST00000178497 72 ntBASIC1.06□□□□□ -2.24
Usf1Q61069 Gm16399-201ENSMUST00000181423 219 ntBASIC1.06□□□□□ -2.24
Usf1Q61069 Gm37801-201ENSMUST00000194754 274 ntBASIC1.06□□□□□ -2.24
Usf1Q61069 Gm34139-201ENSMUST00000196166 294 ntBASIC1.06□□□□□ -2.24
Usf1Q61069 Gm42774-201ENSMUST00000198854 283 ntBASIC1.06□□□□□ -2.24
Usf1Q61069 Gm25578-201ENSMUST00000083406 104 ntBASIC1.06□□□□□ -2.24
Usf1Q61069 Vmn1r75-202ENSMUST00000226622 6638 ntAPPRIS P2 BASIC1.05□□□□□ -2.24
Usf1Q61069 Gm24865-201ENSMUST00000103246 96 ntBASIC1.05□□□□□ -2.24
Usf1Q61069 Mir767-201ENSMUST00000103256 107 ntBASIC1.05□□□□□ -2.24
Usf1Q61069 Gm23991-201ENSMUST00000117033 93 ntBASIC1.05□□□□□ -2.24
Usf1Q61069 Rpl30-ps5-201ENSMUST00000117104 361 ntBASIC1.05□□□□□ -2.24
Usf1Q61069 Gm12449-201ENSMUST00000117572 234 ntBASIC1.05□□□□□ -2.24
Usf1Q61069 Gm11834-201ENSMUST00000122257 585 ntBASIC1.05□□□□□ -2.24
Usf1Q61069 Gm14298-201ENSMUST00000139032 237 ntBASIC1.05□□□□□ -2.24
Usf1Q61069 Gm16356-201ENSMUST00000143300 169 ntBASIC1.05□□□□□ -2.24
Usf1Q61069 Mir3061-201ENSMUST00000175129 91 ntBASIC1.05□□□□□ -2.24
Usf1Q61069 Gm37845-201ENSMUST00000194977 355 ntBASIC1.05□□□□□ -2.24
Usf1Q61069 Gm38109-201ENSMUST00000195386 181 ntBASIC1.05□□□□□ -2.24
Usf1Q61069 AC122242.1-201ENSMUST00000224650 304 ntBASIC1.05□□□□□ -2.24
Usf1Q61069 Gm25930-201ENSMUST00000082785 107 ntBASIC1.05□□□□□ -2.24
Usf1Q61069 Gm23412-201ENSMUST00000083017 107 ntBASIC1.05□□□□□ -2.24
Usf1Q61069 Gm23245-201ENSMUST00000083370 135 ntBASIC1.05□□□□□ -2.24
Usf1Q61069 Vmn1r75-204ENSMUST00000227611 4336 ntAPPRIS ALT2 BASIC1.04□□□□□ -2.24
Usf1Q61069 Gm22785-201ENSMUST00000104087 132 ntBASIC1.04□□□□□ -2.24
Usf1Q61069 Gm12647-201ENSMUST00000118977 265 ntBASIC1.04□□□□□ -2.24
Usf1Q61069 Gm23893-201ENSMUST00000158106 134 ntBASIC1.04□□□□□ -2.24
Usf1Q61069 Gm21060-201ENSMUST00000179346 168 ntAPPRIS P1 BASIC1.04□□□□□ -2.24
Usf1Q61069 Gm38074-201ENSMUST00000193467 145 ntTSL 5 BASIC1.04□□□□□ -2.24
Usf1Q61069 Nbdy-205ENSMUST00000208235 132 ntAPPRIS P2 TSL 2 BASIC1.04□□□□□ -2.24
Usf1Q61069 AC125020.2-201ENSMUST00000218894 348 ntBASIC1.04□□□□□ -2.24
Usf1Q61069 AC164117.2-201ENSMUST00000222090 327 ntBASIC1.04□□□□□ -2.24
Usf1Q61069 AC154328.1-201ENSMUST00000225875 307 ntBASIC1.04□□□□□ -2.24
Usf1Q61069 AC160550.1-201ENSMUST00000228659 181 ntBASIC1.04□□□□□ -2.24
Usf1Q61069 Gm24164-201ENSMUST00000093663 104 ntBASIC1.04□□□□□ -2.24
Usf1Q61069 Olfr820-203ENSMUST00000215791 3956 ntAPPRIS P1 TSL 5 BASIC1.03□□□□□ -2.24
Usf1Q61069 Traj13-201ENSMUST00000103728 57 ntAPPRIS P1 BASIC1.03□□□□□ -2.24
Usf1Q61069 Gm24283-201ENSMUST00000104233 107 ntBASIC1.03□□□□□ -2.24
Usf1Q61069 Gm11248-201ENSMUST00000119568 201 ntBASIC1.03□□□□□ -2.24
Usf1Q61069 Gm14761-201ENSMUST00000121363 262 ntBASIC1.03□□□□□ -2.24
Usf1Q61069 Gm22944-201ENSMUST00000158662 133 ntBASIC1.03□□□□□ -2.24
Usf1Q61069 Gm23474-201ENSMUST00000158884 75 ntBASIC1.03□□□□□ -2.24
Usf1Q61069 Mir5104-201ENSMUST00000175319 94 ntBASIC1.03□□□□□ -2.24
Usf1Q61069 Gm28661-201ENSMUST00000188231 681 ntBASIC1.03□□□□□ -2.24
Usf1Q61069 Olfr921-202ENSMUST00000213958 4012 ntAPPRIS P1 TSL 2 BASIC1.02□□□□□ -2.25
Usf1Q61069 Gm14491-201ENSMUST00000121919 199 ntBASIC1.02□□□□□ -2.25
Usf1Q61069 Gm23759-201ENSMUST00000158351 268 ntBASIC1.02□□□□□ -2.25
Usf1Q61069 Selenok-ps4-201ENSMUST00000178835 277 ntBASIC1.02□□□□□ -2.25
Usf1Q61069 Mir6540-201ENSMUST00000184886 108 ntBASIC1.02□□□□□ -2.25
Usf1Q61069 Gm36546-201ENSMUST00000206372 230 ntTSL 5 BASIC1.02□□□□□ -2.25
Usf1Q61069 Gm10264-201ENSMUST00000220589 429 ntBASIC1.02□□□□□ -2.25
Usf1Q61069 Olfr1222-203ENSMUST00000215816 3796 ntAPPRIS P1 TSL 5 BASIC1.01□□□□□ -2.25
Usf1Q61069 Gm14846-201ENSMUST00000121868 216 ntBASIC1.01□□□□□ -2.25
Usf1Q61069 Mir1967-201ENSMUST00000157789 82 ntBASIC1.01□□□□□ -2.25
Usf1Q61069 Vmn2r-ps65-201ENSMUST00000173309 220 ntBASIC1.01□□□□□ -2.25
Usf1Q61069 Gm22403-201ENSMUST00000174919 84 ntBASIC1.01□□□□□ -2.25
Usf1Q61069 Gm22114-201ENSMUST00000177756 107 ntBASIC1.01□□□□□ -2.25
Usf1Q61069 Gm43602-201ENSMUST00000196772 300 ntBASIC1.01□□□□□ -2.25
Usf1Q61069 Gm44063-201ENSMUST00000203307 376 ntBASIC1.01□□□□□ -2.25
Usf1Q61069 Gm45738-201ENSMUST00000203645 233 ntTSL 5 BASIC1.01□□□□□ -2.25
Usf1Q61069 Klk1b28-ps-201ENSMUST00000206374 217 ntBASIC1.01□□□□□ -2.25
Usf1Q61069 AC164612.2-202ENSMUST00000216314 253 ntBASIC1.01□□□□□ -2.25
Usf1Q61069 RMST_1.1-206ENSMUST00000218255 309 ntTSL 3 BASIC1.01□□□□□ -2.25
Usf1Q61069 AC173482.5-201ENSMUST00000224181 327 ntBASIC1.01□□□□□ -2.25
Usf1Q61069 Mir27b-201ENSMUST00000083541 73 ntBASIC1.01□□□□□ -2.25
Usf1Q61069 Olfr867-202ENSMUST00000212098 4228 ntTSL 3 BASIC1.01□□□□□ -2.25
Usf1Q61069 Gm6377-201ENSMUST00000060013 2793 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
Usf1Q61069 Gm25781-201ENSMUST00000122527 84 ntBASIC1□□□□□ -2.25
Usf1Q61069 Bsph2-ps-201ENSMUST00000183795 241 ntBASIC1□□□□□ -2.25
Usf1Q61069 Rpl23a-ps7-201ENSMUST00000185437 460 ntBASIC1□□□□□ -2.25
Usf1Q61069 Gm19777-201ENSMUST00000191940 358 ntBASIC1□□□□□ -2.25
Usf1Q61069 Gm44325-201ENSMUST00000196757 77 ntBASIC1□□□□□ -2.25
Usf1Q61069 Mir376a-201ENSMUST00000197584 68 ntBASIC1□□□□□ -2.25
Usf1Q61069 AC157476.1-201ENSMUST00000215555 169 ntBASIC1□□□□□ -2.25
Usf1Q61069 CT010449.1-201ENSMUST00000220624 153 ntBASIC1□□□□□ -2.25
Usf1Q61069 AC116589.4-201ENSMUST00000222390 216 ntBASIC1□□□□□ -2.25
Usf1Q61069 Gm22545-201ENSMUST00000104350 132 ntBASIC0.99□□□□□ -2.25
Usf1Q61069 Gm25787-201ENSMUST00000104709 92 ntBASIC0.99□□□□□ -2.25
Usf1Q61069 Gm24588-201ENSMUST00000116696 83 ntBASIC0.99□□□□□ -2.25
Usf1Q61069 Mup-ps22-201ENSMUST00000121611 243 ntBASIC0.99□□□□□ -2.25
Usf1Q61069 Gm26255-201ENSMUST00000122492 103 ntBASIC0.99□□□□□ -2.25
Usf1Q61069 Gm22477-201ENSMUST00000122569 316 ntBASIC0.99□□□□□ -2.25
Usf1Q61069 n-R5s188-201ENSMUST00000122646 105 ntBASIC0.99□□□□□ -2.25
Usf1Q61069 Mir1904-201ENSMUST00000122702 80 ntBASIC0.99□□□□□ -2.25
Usf1Q61069 Gm22883-201ENSMUST00000157376 106 ntBASIC0.99□□□□□ -2.25
Usf1Q61069 Gm22074-201ENSMUST00000158595 113 ntBASIC0.99□□□□□ -2.25
Usf1Q61069 Snora24-201ENSMUST00000174989 130 ntBASIC0.99□□□□□ -2.25
Retrieved 100 of 76,532 protein–RNA pairs in 138.3 ms