Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Gm28020-201ENSMUST00000157739 67 ntBASIC1.86□□□□□ -2.11
ClpbQ60649 Mir1967-201ENSMUST00000157789 82 ntBASIC1.86□□□□□ -2.11
ClpbQ60649 Gm23665-201ENSMUST00000158054 62 ntBASIC1.86□□□□□ -2.11
ClpbQ60649 Mir6995-201ENSMUST00000183658 71 ntBASIC1.86□□□□□ -2.11
ClpbQ60649 Gm27722-201ENSMUST00000183908 76 ntBASIC1.86□□□□□ -2.11
ClpbQ60649 Gm27443-201ENSMUST00000184660 98 ntBASIC1.86□□□□□ -2.11
ClpbQ60649 Ranbp2-ps5-201ENSMUST00000185141 379 ntBASIC1.86□□□□□ -2.11
ClpbQ60649 Gm24453-201ENSMUST00000083346 76 ntBASIC1.86□□□□□ -2.11
ClpbQ60649 Olfr790-202ENSMUST00000203966 2602 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
ClpbQ60649 Olfr821-203ENSMUST00000214177 1929 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
ClpbQ60649 Gm6897-201ENSMUST00000117714 138 ntBASIC1.85□□□□□ -2.11
ClpbQ60649 Gm14758-201ENSMUST00000119104 138 ntBASIC1.85□□□□□ -2.11
ClpbQ60649 Gm6444-201ENSMUST00000119611 458 ntBASIC1.85□□□□□ -2.11
ClpbQ60649 n-R5s159-201ENSMUST00000122681 120 ntBASIC1.85□□□□□ -2.11
ClpbQ60649 Gm22279-201ENSMUST00000157200 93 ntBASIC1.85□□□□□ -2.11
ClpbQ60649 Gm23194-201ENSMUST00000158813 105 ntBASIC1.85□□□□□ -2.11
ClpbQ60649 Gm34139-201ENSMUST00000196166 294 ntBASIC1.85□□□□□ -2.11
ClpbQ60649 Gm23370-201ENSMUST00000199545 130 ntBASIC1.85□□□□□ -2.11
ClpbQ60649 AC165293.1-201ENSMUST00000219669 329 ntBASIC1.85□□□□□ -2.11
ClpbQ60649 Gm10360-201ENSMUST00000097219 272 ntBASIC1.85□□□□□ -2.11
ClpbQ60649 Olfr1044-202ENSMUST00000215171 3266 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
ClpbQ60649 Gm26339-201ENSMUST00000102368 99 ntBASIC1.84□□□□□ -2.11
ClpbQ60649 Gm23011-201ENSMUST00000104148 132 ntBASIC1.84□□□□□ -2.11
ClpbQ60649 Gm24867-201ENSMUST00000104161 107 ntBASIC1.84□□□□□ -2.11
ClpbQ60649 Gm13801-201ENSMUST00000120750 160 ntBASIC1.84□□□□□ -2.11
ClpbQ60649 Gm24595-201ENSMUST00000122501 110 ntBASIC1.84□□□□□ -2.11
ClpbQ60649 Gm15281-201ENSMUST00000125181 351 ntBASIC1.84□□□□□ -2.11
ClpbQ60649 Gm16328-201ENSMUST00000126985 196 ntBASIC1.84□□□□□ -2.11
ClpbQ60649 Gm23258-201ENSMUST00000158319 106 ntBASIC1.84□□□□□ -2.11
ClpbQ60649 Gm24177-201ENSMUST00000158927 131 ntBASIC1.84□□□□□ -2.11
ClpbQ60649 Ear-ps4-201ENSMUST00000166834 450 ntBASIC1.84□□□□□ -2.11
ClpbQ60649 Snord87-201ENSMUST00000175437 87 ntBASIC1.84□□□□□ -2.11
ClpbQ60649 Vmn1r-ps6-202ENSMUST00000202526 135 ntTSL 5 BASIC1.84□□□□□ -2.11
ClpbQ60649 Gm45150-201ENSMUST00000206051 467 ntBASIC1.84□□□□□ -2.11
ClpbQ60649 AC160863.1-201ENSMUST00000218412 317 ntBASIC1.84□□□□□ -2.11
ClpbQ60649 Gm21876-201ENSMUST00000096511 282 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
ClpbQ60649 Gm14327-201ENSMUST00000099001 192 ntTSL 5 BASIC1.84□□□□□ -2.11
ClpbQ60649 Vmn1r75-205ENSMUST00000228268 4376 ntAPPRIS ALT2 BASIC1.84□□□□□ -2.12
ClpbQ60649 Gm25825-201ENSMUST00000157091 124 ntBASIC1.83□□□□□ -2.12
ClpbQ60649 Gm22217-201ENSMUST00000157556 313 ntBASIC1.83□□□□□ -2.12
ClpbQ60649 Gm23181-201ENSMUST00000158685 110 ntBASIC1.83□□□□□ -2.12
ClpbQ60649 Gm27476-201ENSMUST00000183366 104 ntBASIC1.83□□□□□ -2.12
ClpbQ60649 Olfr1448-203ENSMUST00000213713 4336 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
ClpbQ60649 Gm23836-201ENSMUST00000104434 129 ntBASIC1.82□□□□□ -2.12
ClpbQ60649 Gm23656-201ENSMUST00000122626 112 ntBASIC1.82□□□□□ -2.12
ClpbQ60649 Gm13467-201ENSMUST00000145568 281 ntTSL 5 BASIC1.82□□□□□ -2.12
ClpbQ60649 Mir6950-201ENSMUST00000184438 73 ntBASIC1.82□□□□□ -2.12
ClpbQ60649 Gm27544-201ENSMUST00000185069 155 ntBASIC1.82□□□□□ -2.12
ClpbQ60649 Gm28434-201ENSMUST00000187738 500 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
ClpbQ60649 Gm29014-201ENSMUST00000191422 326 ntBASIC1.82□□□□□ -2.12
ClpbQ60649 Gm33866-201ENSMUST00000196911 289 ntBASIC1.82□□□□□ -2.12
ClpbQ60649 Gm19855-201ENSMUST00000210145 249 ntBASIC1.82□□□□□ -2.12
ClpbQ60649 AC144671.1-201ENSMUST00000215265 99 ntBASIC1.82□□□□□ -2.12
ClpbQ60649 Gm22723-201ENSMUST00000083820 129 ntBASIC1.82□□□□□ -2.12
ClpbQ60649 Tlr8-201ENSMUST00000049023 3158 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
ClpbQ60649 Gm13797-201ENSMUST00000121792 120 ntBASIC1.81□□□□□ -2.12
ClpbQ60649 Gm24478-201ENSMUST00000157439 158 ntBASIC1.81□□□□□ -2.12
ClpbQ60649 Gm25914-201ENSMUST00000157618 153 ntBASIC1.81□□□□□ -2.12
ClpbQ60649 Gm22553-201ENSMUST00000157797 295 ntBASIC1.81□□□□□ -2.12
ClpbQ60649 Gm22099-201ENSMUST00000157925 123 ntBASIC1.81□□□□□ -2.12
ClpbQ60649 Gm26482-201ENSMUST00000158015 62 ntBASIC1.81□□□□□ -2.12
ClpbQ60649 Gm25935-201ENSMUST00000178746 107 ntBASIC1.81□□□□□ -2.12
ClpbQ60649 Gm5900-201ENSMUST00000179862 375 ntBASIC1.81□□□□□ -2.12
ClpbQ60649 Gm27585-201ENSMUST00000183717 199 ntBASIC1.81□□□□□ -2.12
ClpbQ60649 Gm28912-201ENSMUST00000189001 234 ntBASIC1.81□□□□□ -2.12
ClpbQ60649 Gm37586-201ENSMUST00000193654 204 ntBASIC1.81□□□□□ -2.12
ClpbQ60649 Mucl1-202ENSMUST00000226484 758 ntAPPRIS P5 BASIC1.81□□□□□ -2.12
ClpbQ60649 AC154213.2-201ENSMUST00000227138 187 ntBASIC1.81□□□□□ -2.12
ClpbQ60649 Gm9805-201ENSMUST00000055305 171 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
ClpbQ60649 Gm25634-201ENSMUST00000082667 105 ntBASIC1.81□□□□□ -2.12
ClpbQ60649 Snora3-201ENSMUST00000083082 132 ntBASIC1.81□□□□□ -2.12
ClpbQ60649 Gm14327-202ENSMUST00000108935 1451 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
ClpbQ60649 Gm37602-201ENSMUST00000195187 3310 ntBASIC1.8□□□□□ -2.12
ClpbQ60649 Olfr1098-202ENSMUST00000111574 2885 ntAPPRIS P1 TSL 3 BASIC1.8□□□□□ -2.12
ClpbQ60649 Gm26026-201ENSMUST00000122726 123 ntBASIC1.8□□□□□ -2.12
ClpbQ60649 Gm25015-201ENSMUST00000158400 128 ntBASIC1.8□□□□□ -2.12
ClpbQ60649 Gm25836-201ENSMUST00000158918 123 ntBASIC1.8□□□□□ -2.12
ClpbQ60649 Vmn2r-ps20-201ENSMUST00000179853 382 ntBASIC1.8□□□□□ -2.12
ClpbQ60649 Gm26864-201ENSMUST00000181346 156 ntBASIC1.8□□□□□ -2.12
ClpbQ60649 C920009B18Rik-204ENSMUST00000181733 123 ntBASIC1.8□□□□□ -2.12
ClpbQ60649 Mir6901-201ENSMUST00000185062 62 ntBASIC1.8□□□□□ -2.12
ClpbQ60649 Mir3569-201ENSMUST00000185080 58 ntBASIC1.8□□□□□ -2.12
ClpbQ60649 Gm45654-201ENSMUST00000210980 123 ntBASIC1.8□□□□□ -2.12
ClpbQ60649 Olfr1041-ps1-201ENSMUST00000215884 271 ntBASIC1.8□□□□□ -2.12
ClpbQ60649 Gm26922-201ENSMUST00000082687 72 ntBASIC1.8□□□□□ -2.12
ClpbQ60649 Gm25142-201ENSMUST00000082698 107 ntBASIC1.8□□□□□ -2.12
ClpbQ60649 Gm22744-201ENSMUST00000083444 65 ntBASIC1.8□□□□□ -2.12
ClpbQ60649 Agmo-201ENSMUST00000049874 2423 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
ClpbQ60649 Olfr805-204ENSMUST00000217219 3314 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
ClpbQ60649 Mir758-201ENSMUST00000103260 81 ntBASIC1.79□□□□□ -2.12
ClpbQ60649 Snord19-201ENSMUST00000104609 76 ntBASIC1.79□□□□□ -2.12
ClpbQ60649 Gm23172-201ENSMUST00000157160 124 ntBASIC1.79□□□□□ -2.12
ClpbQ60649 Gm23230-201ENSMUST00000157298 133 ntBASIC1.79□□□□□ -2.12
ClpbQ60649 Gm23670-201ENSMUST00000157469 119 ntBASIC1.79□□□□□ -2.12
ClpbQ60649 Mir669n-201ENSMUST00000158636 54 ntBASIC1.79□□□□□ -2.12
ClpbQ60649 Mir7026-201ENSMUST00000184384 67 ntBASIC1.79□□□□□ -2.12
ClpbQ60649 Gm45116-201ENSMUST00000207392 275 ntBASIC1.79□□□□□ -2.12
ClpbQ60649 Gm24038-201ENSMUST00000082872 159 ntBASIC1.79□□□□□ -2.12
ClpbQ60649 Vmn1r185-210ENSMUST00000228367 6982 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
ClpbQ60649 Olfr307-202ENSMUST00000213705 4498 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
Retrieved 100 of 76,532 protein–RNA pairs in 93.1 ms