Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 Gm43472-201ENSMUST00000200175 154 ntBASIC-0.65□□□□□ -2.51
Trav3-1Q5R1I8 Gm44803-201ENSMUST00000204384 156 ntBASIC-0.65□□□□□ -2.51
Trav3-1Q5R1I8 Gm44977-201ENSMUST00000205283 420 ntBASIC-0.65□□□□□ -2.51
Trav3-1Q5R1I8 Gm45119-201ENSMUST00000207612 199 ntBASIC-0.65□□□□□ -2.51
Trav3-1Q5R1I8 Gm45471-201ENSMUST00000211270 281 ntBASIC-0.65□□□□□ -2.51
Trav3-1Q5R1I8 AL845349.1-201ENSMUST00000213794 78 ntBASIC-0.65□□□□□ -2.51
Trav3-1Q5R1I8 AC167192.4-201ENSMUST00000224087 993 ntBASIC-0.65□□□□□ -2.51
Trav3-1Q5R1I8 Snord68-201ENSMUST00000082516 86 ntBASIC-0.65□□□□□ -2.51
Trav3-1Q5R1I8 Gm22229-201ENSMUST00000082987 108 ntBASIC-0.65□□□□□ -2.51
Trav3-1Q5R1I8 Gm25791-201ENSMUST00000083292 137 ntBASIC-0.65□□□□□ -2.51
Trav3-1Q5R1I8 Mir18-201ENSMUST00000083469 96 ntBASIC-0.65□□□□□ -2.51
Trav3-1Q5R1I8 Gm14947-201ENSMUST00000133704 303 ntBASIC-0.66□□□□□ -2.52
Trav3-1Q5R1I8 Gm22431-201ENSMUST00000158545 107 ntBASIC-0.66□□□□□ -2.52
Trav3-1Q5R1I8 Gm23568-201ENSMUST00000177960 92 ntBASIC-0.66□□□□□ -2.52
Trav3-1Q5R1I8 Gm25633-201ENSMUST00000178565 107 ntBASIC-0.66□□□□□ -2.52
Trav3-1Q5R1I8 Gm24829-201ENSMUST00000179245 92 ntBASIC-0.66□□□□□ -2.52
Trav3-1Q5R1I8 Gm28288-201ENSMUST00000191019 214 ntBASIC-0.66□□□□□ -2.52
Trav3-1Q5R1I8 Gm42506-201ENSMUST00000202009 150 ntBASIC-0.66□□□□□ -2.52
Trav3-1Q5R1I8 Gm24460-201ENSMUST00000082731 106 ntBASIC-0.66□□□□□ -2.52
Trav3-1Q5R1I8 Gm24355-201ENSMUST00000082858 122 ntBASIC-0.66□□□□□ -2.52
Trav3-1Q5R1I8 Gm22576-201ENSMUST00000083733 104 ntBASIC-0.66□□□□□ -2.52
Trav3-1Q5R1I8 2210418O10Rik-202ENSMUST00000135430 195 ntTSL 5 BASIC-0.67□□□□□ -2.52
Trav3-1Q5R1I8 Mir7j-201ENSMUST00000184427 122 ntBASIC-0.67□□□□□ -2.52
Trav3-1Q5R1I8 Olfr185-ps1-201ENSMUST00000205894 881 ntBASIC-0.67□□□□□ -2.52
Trav3-1Q5R1I8 Gm44954-201ENSMUST00000208513 227 ntBASIC-0.67□□□□□ -2.52
Trav3-1Q5R1I8 AC159619.2-201ENSMUST00000222924 401 ntBASIC-0.67□□□□□ -2.52
Trav3-1Q5R1I8 Gm25878-201ENSMUST00000104327 93 ntBASIC-0.68□□□□□ -2.52
Trav3-1Q5R1I8 Mir1b-201ENSMUST00000117012 122 ntBASIC-0.68□□□□□ -2.52
Trav3-1Q5R1I8 Gm25825-201ENSMUST00000157091 124 ntBASIC-0.68□□□□□ -2.52
Trav3-1Q5R1I8 Gm24418-201ENSMUST00000177597 79 ntBASIC-0.68□□□□□ -2.52
Trav3-1Q5R1I8 Gm24639-201ENSMUST00000178518 79 ntBASIC-0.68□□□□□ -2.52
Trav3-1Q5R1I8 Gm23076-201ENSMUST00000179082 79 ntBASIC-0.68□□□□□ -2.52
Trav3-1Q5R1I8 Gm25077-201ENSMUST00000179157 79 ntBASIC-0.68□□□□□ -2.52
Trav3-1Q5R1I8 Esp24-201ENSMUST00000180245 207 ntAPPRIS P1 TSL 5 BASIC-0.68□□□□□ -2.52
Trav3-1Q5R1I8 Mir7118-201ENSMUST00000197760 61 ntBASIC-0.68□□□□□ -2.52
Trav3-1Q5R1I8 Gm44990-201ENSMUST00000203922 217 ntBASIC-0.68□□□□□ -2.52
Trav3-1Q5R1I8 AC100209.2-201ENSMUST00000224461 451 ntBASIC-0.68□□□□□ -2.52
Trav3-1Q5R1I8 Gm25136-201ENSMUST00000083253 115 ntBASIC-0.68□□□□□ -2.52
Trav3-1Q5R1I8 Mup-ps22-201ENSMUST00000121611 243 ntBASIC-0.69□□□□□ -2.52
Trav3-1Q5R1I8 Gm23958-201ENSMUST00000157207 105 ntBASIC-0.69□□□□□ -2.52
Trav3-1Q5R1I8 Gm24823-201ENSMUST00000175092 91 ntBASIC-0.69□□□□□ -2.52
Trav3-1Q5R1I8 Ranbp2-ps2-201ENSMUST00000184379 370 ntBASIC-0.69□□□□□ -2.52
Trav3-1Q5R1I8 Mir219b-201ENSMUST00000198317 65 ntBASIC-0.69□□□□□ -2.52
Trav3-1Q5R1I8 Gm23763-201ENSMUST00000158345 60 ntBASIC-0.7□□□□□ -2.52
Trav3-1Q5R1I8 Gm26501-201ENSMUST00000178307 107 ntBASIC-0.7□□□□□ -2.52
Trav3-1Q5R1I8 Gm29296-201ENSMUST00000188146 320 ntTSL 5 BASIC-0.7□□□□□ -2.52
Trav3-1Q5R1I8 Gm37468-201ENSMUST00000194767 854 ntTSL 1 (best) BASIC-0.7□□□□□ -2.52
Trav3-1Q5R1I8 Gm44458-201ENSMUST00000196594 143 ntBASIC-0.7□□□□□ -2.52
Trav3-1Q5R1I8 Vmn1r-ps16-201ENSMUST00000204747 105 ntBASIC-0.7□□□□□ -2.52
Trav3-1Q5R1I8 AC116319.1-201ENSMUST00000227765 222 ntBASIC-0.7□□□□□ -2.52
Trav3-1Q5R1I8 Gm29515-201ENSMUST00000188273 2077 ntTSL 1 (best) BASIC-0.7□□□□□ -2.52
Trav3-1Q5R1I8 Gm23531-201ENSMUST00000104567 68 ntBASIC-0.71□□□□□ -2.52
Trav3-1Q5R1I8 Gm15213-201ENSMUST00000122098 216 ntBASIC-0.71□□□□□ -2.52
Trav3-1Q5R1I8 Mir100-201ENSMUST00000175270 80 ntBASIC-0.71□□□□□ -2.52
Trav3-1Q5R1I8 Gm11168-204ENSMUST00000179881 672 ntAPPRIS ALT2 TSL 5 BASIC-0.71□□□□□ -2.52
Trav3-1Q5R1I8 Gm18185-201ENSMUST00000186725 667 ntBASIC-0.71□□□□□ -2.52
Trav3-1Q5R1I8 Gm28597-201ENSMUST00000187664 666 ntBASIC-0.71□□□□□ -2.52
Trav3-1Q5R1I8 Gm37337-201ENSMUST00000192601 993 ntBASIC-0.71□□□□□ -2.52
Trav3-1Q5R1I8 AC124346.1-201ENSMUST00000218539 364 ntBASIC-0.71□□□□□ -2.52
Trav3-1Q5R1I8 AC116589.7-201ENSMUST00000221061 239 ntBASIC-0.71□□□□□ -2.52
Trav3-1Q5R1I8 AC164117.1-201ENSMUST00000221726 239 ntBASIC-0.71□□□□□ -2.52
Trav3-1Q5R1I8 Vmn1r230-201ENSMUST00000053974 951 ntAPPRIS P1 BASIC-0.71□□□□□ -2.52
Trav3-1Q5R1I8 Gm22981-201ENSMUST00000082611 75 ntBASIC-0.71□□□□□ -2.52
Trav3-1Q5R1I8 Gm10717-202ENSMUST00000099042 669 ntAPPRIS P5 TSL 5 BASIC-0.71□□□□□ -2.52
Trav3-1Q5R1I8 Traj38-201ENSMUST00000103704 62 ntAPPRIS P1 BASIC-0.72□□□□□ -2.52
Trav3-1Q5R1I8 Gm14536-201ENSMUST00000118324 138 ntBASIC-0.72□□□□□ -2.52
Trav3-1Q5R1I8 Gm15027-201ENSMUST00000120922 138 ntBASIC-0.72□□□□□ -2.52
Trav3-1Q5R1I8 Gm23788-201ENSMUST00000122535 106 ntBASIC-0.72□□□□□ -2.52
Trav3-1Q5R1I8 Gm22114-201ENSMUST00000177756 107 ntBASIC-0.72□□□□□ -2.52
Trav3-1Q5R1I8 Gm23619-201ENSMUST00000178411 94 ntBASIC-0.72□□□□□ -2.52
Trav3-1Q5R1I8 Gm25474-201ENSMUST00000179052 94 ntBASIC-0.72□□□□□ -2.52
Trav3-1Q5R1I8 Gm22047-201ENSMUST00000179176 94 ntBASIC-0.72□□□□□ -2.52
Trav3-1Q5R1I8 Gm24415-201ENSMUST00000180218 107 ntBASIC-0.72□□□□□ -2.52
Trav3-1Q5R1I8 Mir327-201ENSMUST00000199328 69 ntBASIC-0.72□□□□□ -2.52
Trav3-1Q5R1I8 Gm43487-201ENSMUST00000200331 1031 ntBASIC-0.72□□□□□ -2.52
Trav3-1Q5R1I8 AC211878.4-201ENSMUST00000220970 262 ntBASIC-0.72□□□□□ -2.52
Trav3-1Q5R1I8 AC126554.1-201ENSMUST00000222161 271 ntBASIC-0.72□□□□□ -2.52
Trav3-1Q5R1I8 Gm22738-201ENSMUST00000083440 147 ntBASIC-0.72□□□□□ -2.52
Trav3-1Q5R1I8 Gm6358-201ENSMUST00000089101 156 ntAPPRIS ALT2 BASIC-0.72□□□□□ -2.52
Trav3-1Q5R1I8 Mir1931-201ENSMUST00000158589 119 ntBASIC-0.73□□□□□ -2.53
Trav3-1Q5R1I8 Gm23144-201ENSMUST00000180226 107 ntBASIC-0.73□□□□□ -2.53
Trav3-1Q5R1I8 Topbp1-ps2-201ENSMUST00000191289 189 ntBASIC-0.73□□□□□ -2.53
Trav3-1Q5R1I8 Gm42857-201ENSMUST00000200823 339 ntBASIC-0.73□□□□□ -2.53
Trav3-1Q5R1I8 N4bp2os-201ENSMUST00000201547 235 ntTSL 1 (best) BASIC-0.73□□□□□ -2.53
Trav3-1Q5R1I8 Gm23140-201ENSMUST00000082487 107 ntBASIC-0.73□□□□□ -2.53
Trav3-1Q5R1I8 n-R5s12-201ENSMUST00000083785 119 ntBASIC-0.73□□□□□ -2.53
Trav3-1Q5R1I8 Gm24868-201ENSMUST00000157265 136 ntBASIC-0.74□□□□□ -2.53
Trav3-1Q5R1I8 Gm24000-201ENSMUST00000158063 89 ntBASIC-0.74□□□□□ -2.53
Trav3-1Q5R1I8 Gm24077-201ENSMUST00000158183 136 ntBASIC-0.74□□□□□ -2.53
Trav3-1Q5R1I8 Gm26271-201ENSMUST00000158349 104 ntBASIC-0.74□□□□□ -2.53
Trav3-1Q5R1I8 Gm24308-201ENSMUST00000177773 114 ntBASIC-0.74□□□□□ -2.53
Trav3-1Q5R1I8 Vmn2r-ps20-201ENSMUST00000179853 382 ntBASIC-0.74□□□□□ -2.53
Trav3-1Q5R1I8 Gm26200-201ENSMUST00000180273 79 ntBASIC-0.74□□□□□ -2.53
Trav3-1Q5R1I8 Mir7038-201ENSMUST00000184833 71 ntBASIC-0.74□□□□□ -2.53
Trav3-1Q5R1I8 Gm28418-201ENSMUST00000186179 423 ntBASIC-0.74□□□□□ -2.53
Trav3-1Q5R1I8 Gm44375-201ENSMUST00000196657 150 ntBASIC-0.74□□□□□ -2.53
Trav3-1Q5R1I8 Olfr515-ps1-201ENSMUST00000208389 189 ntBASIC-0.74□□□□□ -2.53
Trav3-1Q5R1I8 Gm26071-201ENSMUST00000083261 107 ntBASIC-0.74□□□□□ -2.53
Trav3-1Q5R1I8 Gm25170-201ENSMUST00000104191 129 ntBASIC-0.75□□□□□ -2.53
Trav3-1Q5R1I8 Gm25416-201ENSMUST00000104221 107 ntBASIC-0.75□□□□□ -2.53
Retrieved 100 of 76,532 protein–RNA pairs in 87.5 ms