Protein–RNA interactions for Protein: Q5QNQ9

Col27a1, Collagen alpha-1(XXVII) chain, mousemouse

Predictions only

Length 1,845 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col27a1Q5QNQ9 Gm25284-201ENSMUST00000180345 141 ntBASIC0.6□□□□□ -2.31
Col27a1Q5QNQ9 Traj56-201ENSMUST00000103689 63 ntAPPRIS P1 BASIC0.59□□□□□ -2.31
Col27a1Q5QNQ9 Mir1197-201ENSMUST00000117037 120 ntBASIC0.59□□□□□ -2.31
Col27a1Q5QNQ9 n-R5s188-201ENSMUST00000122646 105 ntBASIC0.59□□□□□ -2.31
Col27a1Q5QNQ9 Gm22598-201ENSMUST00000157600 127 ntBASIC0.59□□□□□ -2.31
Col27a1Q5QNQ9 Gm22447-201ENSMUST00000158155 92 ntBASIC0.59□□□□□ -2.31
Col27a1Q5QNQ9 Gm25011-201ENSMUST00000158398 126 ntBASIC0.59□□□□□ -2.31
Col27a1Q5QNQ9 Gm22164-201ENSMUST00000158413 106 ntBASIC0.59□□□□□ -2.31
Col27a1Q5QNQ9 Gm26213-201ENSMUST00000158582 110 ntBASIC0.59□□□□□ -2.31
Col27a1Q5QNQ9 Mir15a-201ENSMUST00000175266 84 ntBASIC0.59□□□□□ -2.31
Col27a1Q5QNQ9 Selenok-ps4-201ENSMUST00000178835 277 ntBASIC0.59□□□□□ -2.31
Col27a1Q5QNQ9 Gm27420-201ENSMUST00000183823 79 ntBASIC0.59□□□□□ -2.31
Col27a1Q5QNQ9 Gm43602-201ENSMUST00000196772 300 ntBASIC0.59□□□□□ -2.31
Col27a1Q5QNQ9 Gm44473-201ENSMUST00000204039 152 ntBASIC0.59□□□□□ -2.31
Col27a1Q5QNQ9 Gm44960-201ENSMUST00000207403 141 ntBASIC0.59□□□□□ -2.31
Col27a1Q5QNQ9 AC168056.1-201ENSMUST00000225270 180 ntBASIC0.59□□□□□ -2.31
Col27a1Q5QNQ9 mt-Tm-201ENSMUST00000082395 69 ntBASIC0.59□□□□□ -2.31
Col27a1Q5QNQ9 Gm24038-201ENSMUST00000082872 159 ntBASIC0.59□□□□□ -2.31
Col27a1Q5QNQ9 Gm12449-201ENSMUST00000117572 234 ntBASIC0.59□□□□□ -2.32
Col27a1Q5QNQ9 Gm23339-201ENSMUST00000158962 139 ntBASIC0.59□□□□□ -2.32
Col27a1Q5QNQ9 Trav5d-3-201ENSMUST00000170041 270 ntBASIC0.59□□□□□ -2.32
Col27a1Q5QNQ9 Mir344d-3-201ENSMUST00000175458 80 ntBASIC0.59□□□□□ -2.32
Col27a1Q5QNQ9 Gm17067-202ENSMUST00000180131 123 ntBASIC0.59□□□□□ -2.32
Col27a1Q5QNQ9 Gm24020-201ENSMUST00000180156 108 ntBASIC0.59□□□□□ -2.32
Col27a1Q5QNQ9 Gm28344-201ENSMUST00000185704 279 ntBASIC0.59□□□□□ -2.32
Col27a1Q5QNQ9 Gm36946-201ENSMUST00000192706 435 ntBASIC0.59□□□□□ -2.32
Col27a1Q5QNQ9 Mirlet7f-1-201ENSMUST00000198652 89 ntBASIC0.59□□□□□ -2.32
Col27a1Q5QNQ9 AC164086.1-201ENSMUST00000221038 289 ntBASIC0.59□□□□□ -2.32
Col27a1Q5QNQ9 Gm33654-201ENSMUST00000221704 215 ntBASIC0.59□□□□□ -2.32
Col27a1Q5QNQ9 AC151833.1-201ENSMUST00000227752 574 ntBASIC0.59□□□□□ -2.32
Col27a1Q5QNQ9 Gm22884-201ENSMUST00000083127 140 ntBASIC0.59□□□□□ -2.32
Col27a1Q5QNQ9 Mir101a-201ENSMUST00000083517 83 ntBASIC0.59□□□□□ -2.32
Col27a1Q5QNQ9 Gm26400-201ENSMUST00000175012 85 ntBASIC0.58□□□□□ -2.32
Col27a1Q5QNQ9 Gm27421-201ENSMUST00000184729 167 ntBASIC0.58□□□□□ -2.32
Col27a1Q5QNQ9 Mir7661-201ENSMUST00000197023 61 ntBASIC0.58□□□□□ -2.32
Col27a1Q5QNQ9 Gm45543-201ENSMUST00000209327 88 ntBASIC0.58□□□□□ -2.32
Col27a1Q5QNQ9 Gm25930-201ENSMUST00000082785 107 ntBASIC0.58□□□□□ -2.32
Col27a1Q5QNQ9 Gm24523-201ENSMUST00000083965 132 ntBASIC0.58□□□□□ -2.32
Col27a1Q5QNQ9 Gm14296-202ENSMUST00000108931 750 ntBASIC0.57□□□□□ -2.32
Col27a1Q5QNQ9 Gm11856-201ENSMUST00000118712 276 ntBASIC0.57□□□□□ -2.32
Col27a1Q5QNQ9 2210418O10Rik-204ENSMUST00000166464 750 ntBASIC0.57□□□□□ -2.32
Col27a1Q5QNQ9 Gm26236-201ENSMUST00000175536 137 ntBASIC0.57□□□□□ -2.32
Col27a1Q5QNQ9 Gm27974-201ENSMUST00000183415 105 ntBASIC0.57□□□□□ -2.32
Col27a1Q5QNQ9 CT485612.2-201ENSMUST00000223014 151 ntBASIC0.57□□□□□ -2.32
Col27a1Q5QNQ9 Gm23627-201ENSMUST00000082459 107 ntBASIC0.57□□□□□ -2.32
Col27a1Q5QNQ9 Gm22248-201ENSMUST00000082482 150 ntBASIC0.57□□□□□ -2.32
Col27a1Q5QNQ9 Gm22502-201ENSMUST00000082488 107 ntBASIC0.57□□□□□ -2.32
Col27a1Q5QNQ9 Gm22977-201ENSMUST00000082615 107 ntBASIC0.57□□□□□ -2.32
Col27a1Q5QNQ9 Gm24149-201ENSMUST00000082757 107 ntBASIC0.57□□□□□ -2.32
Col27a1Q5QNQ9 Gm23055-201ENSMUST00000082805 94 ntBASIC0.57□□□□□ -2.32
Col27a1Q5QNQ9 Gm24355-201ENSMUST00000082858 122 ntBASIC0.57□□□□□ -2.32
Col27a1Q5QNQ9 Mir92-2-201ENSMUST00000083679 91 ntBASIC0.57□□□□□ -2.32
Col27a1Q5QNQ9 Gm26314-201ENSMUST00000083891 107 ntBASIC0.57□□□□□ -2.32
Col27a1Q5QNQ9 AC127302.3-201ENSMUST00000215480 2791 ntBASIC0.57□□□□□ -2.32
Col27a1Q5QNQ9 Traj45-201ENSMUST00000103697 63 ntAPPRIS P1 BASIC0.57□□□□□ -2.32
Col27a1Q5QNQ9 Gm14039-201ENSMUST00000118705 101 ntBASIC0.57□□□□□ -2.32
Col27a1Q5QNQ9 Gm12143-201ENSMUST00000119666 332 ntBASIC0.57□□□□□ -2.32
Col27a1Q5QNQ9 2210418O10Rik-202ENSMUST00000135430 195 ntTSL 5 BASIC0.57□□□□□ -2.32
Col27a1Q5QNQ9 Gm22515-201ENSMUST00000158273 305 ntBASIC0.57□□□□□ -2.32
Col27a1Q5QNQ9 Gm26914-201ENSMUST00000182262 223 ntBASIC0.57□□□□□ -2.32
Col27a1Q5QNQ9 Gm27640-201ENSMUST00000184580 147 ntBASIC0.57□□□□□ -2.32
Col27a1Q5QNQ9 Gm28489-201ENSMUST00000186655 316 ntBASIC0.57□□□□□ -2.32
Col27a1Q5QNQ9 Gm29022-201ENSMUST00000190702 225 ntBASIC0.57□□□□□ -2.32
Col27a1Q5QNQ9 Gm42623-201ENSMUST00000197225 379 ntBASIC0.57□□□□□ -2.32
Col27a1Q5QNQ9 Gm38407-201ENSMUST00000218017 474 ntTSL 2 BASIC0.57□□□□□ -2.32
Col27a1Q5QNQ9 AC173345.2-201ENSMUST00000222795 153 ntBASIC0.57□□□□□ -2.32
Col27a1Q5QNQ9 AC183092.1-201ENSMUST00000224301 153 ntBASIC0.57□□□□□ -2.32
Col27a1Q5QNQ9 Gm24793-201ENSMUST00000104289 132 ntBASIC0.56□□□□□ -2.32
Col27a1Q5QNQ9 Gm22477-201ENSMUST00000122569 316 ntBASIC0.56□□□□□ -2.32
Col27a1Q5QNQ9 Gm24438-201ENSMUST00000157893 115 ntBASIC0.56□□□□□ -2.32
Col27a1Q5QNQ9 Gm37763-201ENSMUST00000193445 120 ntBASIC0.56□□□□□ -2.32
Col27a1Q5QNQ9 N4bp2os-201ENSMUST00000201547 235 ntTSL 1 (best) BASIC0.56□□□□□ -2.32
Col27a1Q5QNQ9 Snord42a-201ENSMUST00000082606 65 ntBASIC0.56□□□□□ -2.32
Col27a1Q5QNQ9 Snord96a-201ENSMUST00000082791 81 ntBASIC0.56□□□□□ -2.32
Col27a1Q5QNQ9 Gm24163-201ENSMUST00000093660 132 ntBASIC0.56□□□□□ -2.32
Col27a1Q5QNQ9 Gm23114-201ENSMUST00000158478 117 ntBASIC0.55□□□□□ -2.32
Col27a1Q5QNQ9 Vmn2r-ps65-201ENSMUST00000173309 220 ntBASIC0.55□□□□□ -2.32
Col27a1Q5QNQ9 Gm25750-201ENSMUST00000175483 112 ntBASIC0.55□□□□□ -2.32
Col27a1Q5QNQ9 Gm28409-201ENSMUST00000187064 103 ntBASIC0.55□□□□□ -2.32
Col27a1Q5QNQ9 Gm28992-201ENSMUST00000190534 139 ntBASIC0.55□□□□□ -2.32
Col27a1Q5QNQ9 Gm37918-201ENSMUST00000192071 120 ntBASIC0.55□□□□□ -2.32
Col27a1Q5QNQ9 Gm43472-201ENSMUST00000200175 154 ntBASIC0.55□□□□□ -2.32
Col27a1Q5QNQ9 AC154636.2-201ENSMUST00000222538 161 ntBASIC0.55□□□□□ -2.32
Col27a1Q5QNQ9 Mir767-201ENSMUST00000103256 107 ntBASIC0.54□□□□□ -2.32
Col27a1Q5QNQ9 Mir669p-2-201ENSMUST00000103868 87 ntBASIC0.54□□□□□ -2.32
Col27a1Q5QNQ9 Mir669p-1-201ENSMUST00000103884 87 ntBASIC0.54□□□□□ -2.32
Col27a1Q5QNQ9 Gm14536-201ENSMUST00000118324 138 ntBASIC0.54□□□□□ -2.32
Col27a1Q5QNQ9 Gm12647-201ENSMUST00000118977 265 ntBASIC0.54□□□□□ -2.32
Col27a1Q5QNQ9 Gm14568-201ENSMUST00000119321 294 ntBASIC0.54□□□□□ -2.32
Col27a1Q5QNQ9 Gm15027-201ENSMUST00000120922 138 ntBASIC0.54□□□□□ -2.32
Col27a1Q5QNQ9 Gm22113-201ENSMUST00000158343 104 ntBASIC0.54□□□□□ -2.32
Col27a1Q5QNQ9 Gm16405-201ENSMUST00000169247 468 ntAPPRIS P1 TSL 3 BASIC0.54□□□□□ -2.32
Col27a1Q5QNQ9 Gm7958-201ENSMUST00000178255 468 ntBASIC0.54□□□□□ -2.32
Col27a1Q5QNQ9 Gm7950-201ENSMUST00000179633 468 ntBASIC0.54□□□□□ -2.32
Col27a1Q5QNQ9 Mir6389-201ENSMUST00000183661 102 ntBASIC0.54□□□□□ -2.32
Col27a1Q5QNQ9 AC125167.1-201ENSMUST00000198698 141 ntBASIC0.54□□□□□ -2.32
Col27a1Q5QNQ9 Gm34783-201ENSMUST00000209159 303 ntBASIC0.54□□□□□ -2.32
Col27a1Q5QNQ9 AC132615.1-201ENSMUST00000213873 255 ntBASIC0.54□□□□□ -2.32
Col27a1Q5QNQ9 AC157476.1-201ENSMUST00000215555 169 ntBASIC0.54□□□□□ -2.32
Col27a1Q5QNQ9 Gm24164-201ENSMUST00000093663 104 ntBASIC0.54□□□□□ -2.32
Retrieved 100 of 76,532 protein–RNA pairs in 86.6 ms