Protein–RNA interactions for Protein: Q5I043

Usp28, Ubiquitin carboxyl-terminal hydrolase 28, mousemouse

Predictions only

Length 1,051 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp28Q5I043 Gm25759-201ENSMUST00000103988 129 ntBASIC1.19□□□□□ -2.22
Usp28Q5I043 Gm25884-201ENSMUST00000157782 62 ntBASIC1.19□□□□□ -2.22
Usp28Q5I043 Gm23083-201ENSMUST00000157851 116 ntBASIC1.19□□□□□ -2.22
Usp28Q5I043 Rpl23a-ps7-201ENSMUST00000185437 460 ntBASIC1.19□□□□□ -2.22
Usp28Q5I043 Ighv1-23-201ENSMUST00000194625 351 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
Usp28Q5I043 Gm19855-201ENSMUST00000210145 249 ntBASIC1.19□□□□□ -2.22
Usp28Q5I043 AC154636.2-201ENSMUST00000222538 161 ntBASIC1.19□□□□□ -2.22
Usp28Q5I043 Rps24-ps2-201ENSMUST00000091375 395 ntBASIC1.19□□□□□ -2.22
Usp28Q5I043 8030445P17Rik-201ENSMUST00000192614 2741 ntBASIC1.18□□□□□ -2.22
Usp28Q5I043 Mir767-201ENSMUST00000103256 107 ntBASIC1.18□□□□□ -2.22
Usp28Q5I043 Gm25377-201ENSMUST00000104334 129 ntBASIC1.18□□□□□ -2.22
Usp28Q5I043 Gm23492-201ENSMUST00000116837 115 ntBASIC1.18□□□□□ -2.22
Usp28Q5I043 Gm10722-201ENSMUST00000151376 651 ntAPPRIS P1 TSL 5 BASIC1.18□□□□□ -2.22
Usp28Q5I043 Gm23170-201ENSMUST00000157158 106 ntBASIC1.18□□□□□ -2.22
Usp28Q5I043 Mir7009-201ENSMUST00000184519 64 ntBASIC1.18□□□□□ -2.22
Usp28Q5I043 Gm29308-201ENSMUST00000188863 315 ntBASIC1.18□□□□□ -2.22
Usp28Q5I043 Gm28330-201ENSMUST00000190353 171 ntBASIC1.18□□□□□ -2.22
Usp28Q5I043 Gm38060-201ENSMUST00000194822 464 ntBASIC1.18□□□□□ -2.22
Usp28Q5I043 Mir465d-201ENSMUST00000196314 58 ntBASIC1.18□□□□□ -2.22
Usp28Q5I043 Gm44352-201ENSMUST00000196358 110 ntBASIC1.18□□□□□ -2.22
Usp28Q5I043 Olfr515-ps1-201ENSMUST00000208389 189 ntBASIC1.18□□□□□ -2.22
Usp28Q5I043 Gm45268-201ENSMUST00000210046 370 ntBASIC1.18□□□□□ -2.22
Usp28Q5I043 Mir181a-2-201ENSMUST00000083489 76 ntBASIC1.18□□□□□ -2.22
Usp28Q5I043 Gm23039-201ENSMUST00000083870 161 ntBASIC1.18□□□□□ -2.22
Usp28Q5I043 Gm26135-201ENSMUST00000101993 72 ntBASIC1.17□□□□□ -2.22
Usp28Q5I043 Gm25938-201ENSMUST00000104139 166 ntBASIC1.17□□□□□ -2.22
Usp28Q5I043 Gm14922-201ENSMUST00000121131 163 ntBASIC1.17□□□□□ -2.22
Usp28Q5I043 Mup-ps22-201ENSMUST00000121611 243 ntBASIC1.17□□□□□ -2.22
Usp28Q5I043 Gm15213-201ENSMUST00000122098 216 ntBASIC1.17□□□□□ -2.22
Usp28Q5I043 Gm22279-201ENSMUST00000157200 93 ntBASIC1.17□□□□□ -2.22
Usp28Q5I043 Gm22216-201ENSMUST00000157557 114 ntBASIC1.17□□□□□ -2.22
Usp28Q5I043 Gm25423-201ENSMUST00000157609 107 ntBASIC1.17□□□□□ -2.22
Usp28Q5I043 Gm23640-201ENSMUST00000157860 104 ntBASIC1.17□□□□□ -2.22
Usp28Q5I043 Gm26022-201ENSMUST00000158663 108 ntBASIC1.17□□□□□ -2.22
Usp28Q5I043 Gm22663-201ENSMUST00000158721 102 ntBASIC1.17□□□□□ -2.22
Usp28Q5I043 Snord50b-201ENSMUST00000178497 72 ntBASIC1.17□□□□□ -2.22
Usp28Q5I043 Gm22448-201ENSMUST00000179254 107 ntBASIC1.17□□□□□ -2.22
Usp28Q5I043 Gm28537-201ENSMUST00000189026 315 ntBASIC1.17□□□□□ -2.22
Usp28Q5I043 Gm29631-201ENSMUST00000191065 315 ntBASIC1.17□□□□□ -2.22
Usp28Q5I043 Gm19777-201ENSMUST00000191940 358 ntBASIC1.17□□□□□ -2.22
Usp28Q5I043 Gm42774-201ENSMUST00000198854 283 ntBASIC1.17□□□□□ -2.22
Usp28Q5I043 Gm25204-201ENSMUST00000082843 106 ntBASIC1.17□□□□□ -2.22
Usp28Q5I043 Gm24764-201ENSMUST00000083686 199 ntBASIC1.17□□□□□ -2.22
Usp28Q5I043 Gm23536-201ENSMUST00000157541 134 ntBASIC1.16□□□□□ -2.22
Usp28Q5I043 Gm24847-201ENSMUST00000158032 108 ntBASIC1.16□□□□□ -2.22
Usp28Q5I043 Ranbp2-ps7-201ENSMUST00000183924 384 ntBASIC1.16□□□□□ -2.22
Usp28Q5I043 Gm27898-201ENSMUST00000183987 80 ntBASIC1.16□□□□□ -2.22
Usp28Q5I043 Gm43406-201ENSMUST00000200356 334 ntBASIC1.16□□□□□ -2.22
Usp28Q5I043 Gm38407-201ENSMUST00000218017 474 ntTSL 2 BASIC1.16□□□□□ -2.22
Usp28Q5I043 Gm26447-201ENSMUST00000082448 129 ntBASIC1.16□□□□□ -2.22
Usp28Q5I043 Olfr183-201ENSMUST00000073320 2040 ntAPPRIS P1 TSL 2 BASIC1.16□□□□□ -2.22
Usp28Q5I043 Gm44240-201ENSMUST00000204015 2654 ntBASIC1.15□□□□□ -2.22
Usp28Q5I043 Gm25068-201ENSMUST00000103895 110 ntBASIC1.15□□□□□ -2.23
Usp28Q5I043 Mir669i-201ENSMUST00000117007 127 ntBASIC1.15□□□□□ -2.23
Usp28Q5I043 Gm15391-201ENSMUST00000147509 257 ntTSL 3 BASIC1.15□□□□□ -2.23
Usp28Q5I043 1700120G11Rik-201ENSMUST00000150273 491 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
Usp28Q5I043 Gm22944-201ENSMUST00000158662 133 ntBASIC1.15□□□□□ -2.23
Usp28Q5I043 Gm23182-201ENSMUST00000158688 135 ntBASIC1.15□□□□□ -2.23
Usp28Q5I043 Gm2962-201ENSMUST00000159266 336 ntBASIC1.15□□□□□ -2.23
Usp28Q5I043 AC125020.2-201ENSMUST00000218894 348 ntBASIC1.15□□□□□ -2.23
Usp28Q5I043 AC098718.1-201ENSMUST00000226166 175 ntBASIC1.15□□□□□ -2.23
Usp28Q5I043 AC160550.1-201ENSMUST00000228659 181 ntBASIC1.15□□□□□ -2.23
Usp28Q5I043 Gm24038-201ENSMUST00000082872 159 ntBASIC1.15□□□□□ -2.23
Usp28Q5I043 Gm26495-201ENSMUST00000083152 137 ntBASIC1.15□□□□□ -2.23
Usp28Q5I043 Gm22780-201ENSMUST00000104084 132 ntBASIC1.14□□□□□ -2.23
Usp28Q5I043 Gm23982-201ENSMUST00000157141 106 ntBASIC1.14□□□□□ -2.23
Usp28Q5I043 Gm37089-201ENSMUST00000195616 129 ntBASIC1.14□□□□□ -2.23
Usp28Q5I043 Arhgap5-201ENSMUST00000110725 5197 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
Usp28Q5I043 Gm23836-201ENSMUST00000104434 129 ntBASIC1.13□□□□□ -2.23
Usp28Q5I043 Mir1951-201ENSMUST00000157981 89 ntBASIC1.13□□□□□ -2.23
Usp28Q5I043 Gm23636-201ENSMUST00000175070 95 ntBASIC1.13□□□□□ -2.23
Usp28Q5I043 Gm27521-201ENSMUST00000184022 64 ntBASIC1.13□□□□□ -2.23
Usp28Q5I043 Gm42719-201ENSMUST00000197393 355 ntBASIC1.13□□□□□ -2.23
Usp28Q5I043 Gm42891-201ENSMUST00000199340 281 ntTSL 5 BASIC1.13□□□□□ -2.23
Usp28Q5I043 Gm24252-201ENSMUST00000083700 132 ntBASIC1.13□□□□□ -2.23
Usp28Q5I043 Vmn1r75-207ENSMUST00000228646 4466 ntAPPRIS ALT2 BASIC1.13□□□□□ -2.23
Usp28Q5I043 Gm42718-201ENSMUST00000197319 2681 ntBASIC1.12□□□□□ -2.23
Usp28Q5I043 Gm44177-201ENSMUST00000204338 2667 ntBASIC1.12□□□□□ -2.23
Usp28Q5I043 Mir669o-201ENSMUST00000103898 96 ntBASIC1.12□□□□□ -2.23
Usp28Q5I043 Rpl30-ps5-201ENSMUST00000117104 361 ntBASIC1.12□□□□□ -2.23
Usp28Q5I043 Gm14919-201ENSMUST00000120839 390 ntBASIC1.12□□□□□ -2.23
Usp28Q5I043 Gm14491-201ENSMUST00000121919 199 ntBASIC1.12□□□□□ -2.23
Usp28Q5I043 Gm26479-201ENSMUST00000122620 106 ntBASIC1.12□□□□□ -2.23
Usp28Q5I043 Gm22984-201ENSMUST00000122751 122 ntBASIC1.12□□□□□ -2.23
Usp28Q5I043 Mir7675-201ENSMUST00000184262 58 ntBASIC1.12□□□□□ -2.23
Usp28Q5I043 Mir6380-201ENSMUST00000184334 81 ntBASIC1.12□□□□□ -2.23
Usp28Q5I043 Gm29613-201ENSMUST00000185846 313 ntBASIC1.12□□□□□ -2.23
Usp28Q5I043 Gm28409-201ENSMUST00000187064 103 ntBASIC1.12□□□□□ -2.23
Usp28Q5I043 Gm28849-201ENSMUST00000188127 174 ntBASIC1.12□□□□□ -2.23
Usp28Q5I043 Gm29544-201ENSMUST00000188860 313 ntBASIC1.12□□□□□ -2.23
Usp28Q5I043 Gm29140-201ENSMUST00000190187 476 ntBASIC1.12□□□□□ -2.23
Usp28Q5I043 Gm28808-201ENSMUST00000190978 313 ntBASIC1.12□□□□□ -2.23
Usp28Q5I043 Gm44373-201ENSMUST00000196112 169 ntBASIC1.12□□□□□ -2.23
Usp28Q5I043 Gm36546-201ENSMUST00000206372 230 ntTSL 5 BASIC1.12□□□□□ -2.23
Usp28Q5I043 AC164612.2-202ENSMUST00000216314 253 ntBASIC1.12□□□□□ -2.23
Usp28Q5I043 CT025630.1-201ENSMUST00000227901 172 ntBASIC1.12□□□□□ -2.23
Usp28Q5I043 Gm22248-201ENSMUST00000082482 150 ntBASIC1.12□□□□□ -2.23
Usp28Q5I043 Gm24204-201ENSMUST00000082950 107 ntBASIC1.12□□□□□ -2.23
Usp28Q5I043 Gm23245-201ENSMUST00000083370 135 ntBASIC1.12□□□□□ -2.23
Usp28Q5I043 Gm24261-201ENSMUST00000083744 104 ntBASIC1.12□□□□□ -2.23
Retrieved 100 of 76,532 protein–RNA pairs in 165.2 ms