Protein–RNA interactions for Protein: Q4QRL3

Ccdc88b, Coiled-coil domain-containing protein 88B, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88bQ4QRL3 AC166358.10-201ENSMUST00000220556 144 ntBASIC-1.37□□□□□ -2.63
Ccdc88bQ4QRL3 Gm34408-201ENSMUST00000222104 655 ntTSL 5 BASIC-1.37□□□□□ -2.63
Ccdc88bQ4QRL3 AC129208.2-201ENSMUST00000228506 320 ntBASIC-1.37□□□□□ -2.63
Ccdc88bQ4QRL3 Gm22620-201ENSMUST00000082700 133 ntBASIC-1.37□□□□□ -2.63
Ccdc88bQ4QRL3 Gm25102-201ENSMUST00000122479 112 ntBASIC-1.37□□□□□ -2.63
Ccdc88bQ4QRL3 Gm24894-201ENSMUST00000122744 118 ntBASIC-1.37□□□□□ -2.63
Ccdc88bQ4QRL3 Gm13601-201ENSMUST00000142314 404 ntTSL 3 BASIC-1.37□□□□□ -2.63
Ccdc88bQ4QRL3 Gm5269-201ENSMUST00000183590 138 ntAPPRIS P1 BASIC-1.37□□□□□ -2.63
Ccdc88bQ4QRL3 Gm38295-201ENSMUST00000191951 151 ntBASIC-1.37□□□□□ -2.63
Ccdc88bQ4QRL3 Gm5899-201ENSMUST00000071770 270 ntBASIC-1.37□□□□□ -2.63
Ccdc88bQ4QRL3 Gm23627-201ENSMUST00000082459 107 ntBASIC-1.37□□□□□ -2.63
Ccdc88bQ4QRL3 Gm22743-201ENSMUST00000083445 133 ntBASIC-1.37□□□□□ -2.63
Ccdc88bQ4QRL3 Gm13729-201ENSMUST00000120328 406 ntBASIC-1.38□□□□□ -2.63
Ccdc88bQ4QRL3 Gm12044-201ENSMUST00000120335 213 ntBASIC-1.38□□□□□ -2.63
Ccdc88bQ4QRL3 Gm24725-201ENSMUST00000158229 125 ntBASIC-1.38□□□□□ -2.63
Ccdc88bQ4QRL3 Esp24-201ENSMUST00000180245 207 ntAPPRIS P1 TSL 5 BASIC-1.38□□□□□ -2.63
Ccdc88bQ4QRL3 AC130821.1-201ENSMUST00000221997 293 ntBASIC-1.38□□□□□ -2.63
Ccdc88bQ4QRL3 Gm6293-201ENSMUST00000050339 195 ntBASIC-1.38□□□□□ -2.63
Ccdc88bQ4QRL3 Gm23586-201ENSMUST00000157657 123 ntBASIC-1.39□□□□□ -2.63
Ccdc88bQ4QRL3 Vmn1r-ps6-201ENSMUST00000201079 934 ntBASIC-1.39□□□□□ -2.63
Ccdc88bQ4QRL3 Gm44125-201ENSMUST00000203068 448 ntBASIC-1.39□□□□□ -2.63
Ccdc88bQ4QRL3 AC159297.2-201ENSMUST00000219567 1075 ntBASIC-1.39□□□□□ -2.63
Ccdc88bQ4QRL3 AC154282.1-201ENSMUST00000223154 265 ntBASIC-1.39□□□□□ -2.63
Ccdc88bQ4QRL3 Gm23184-201ENSMUST00000122594 131 ntBASIC-1.4□□□□□ -2.63
Ccdc88bQ4QRL3 Gm26189-201ENSMUST00000179879 107 ntBASIC-1.4□□□□□ -2.63
Ccdc88bQ4QRL3 Mir6335-201ENSMUST00000184081 98 ntBASIC-1.4□□□□□ -2.63
Ccdc88bQ4QRL3 Gm23056-201ENSMUST00000082803 111 ntBASIC-1.4□□□□□ -2.63
Ccdc88bQ4QRL3 Gm26123-201ENSMUST00000083363 135 ntBASIC-1.4□□□□□ -2.63
Ccdc88bQ4QRL3 Gm22886-201ENSMUST00000093714 107 ntBASIC-1.4□□□□□ -2.63
Ccdc88bQ4QRL3 Gm14551-201ENSMUST00000120802 256 ntBASIC-1.41□□□□□ -2.63
Ccdc88bQ4QRL3 Gm24839-201ENSMUST00000122602 107 ntBASIC-1.41□□□□□ -2.63
Ccdc88bQ4QRL3 Mir1936-201ENSMUST00000158699 93 ntBASIC-1.41□□□□□ -2.63
Ccdc88bQ4QRL3 Gm24875-201ENSMUST00000158888 104 ntBASIC-1.41□□□□□ -2.63
Ccdc88bQ4QRL3 Gm27236-201ENSMUST00000184147 442 ntBASIC-1.41□□□□□ -2.63
Ccdc88bQ4QRL3 AL645546.2-201ENSMUST00000224526 265 ntBASIC-1.41□□□□□ -2.63
Ccdc88bQ4QRL3 Gm23613-201ENSMUST00000082596 87 ntBASIC-1.41□□□□□ -2.63
Ccdc88bQ4QRL3 Gm24149-201ENSMUST00000082757 107 ntBASIC-1.41□□□□□ -2.63
Ccdc88bQ4QRL3 Mir1a-1-201ENSMUST00000093635 77 ntBASIC-1.41□□□□□ -2.63
Ccdc88bQ4QRL3 Gm10720-201ENSMUST00000099050 669 ntAPPRIS P1 TSL 5 BASIC-1.41□□□□□ -2.63
Ccdc88bQ4QRL3 Gm22656-201ENSMUST00000104199 171 ntBASIC-1.42□□□□□ -2.64
Ccdc88bQ4QRL3 Gm15176-201ENSMUST00000117734 135 ntBASIC-1.42□□□□□ -2.64
Ccdc88bQ4QRL3 Gm22100-201ENSMUST00000157926 63 ntBASIC-1.42□□□□□ -2.64
Ccdc88bQ4QRL3 Gm28016-201ENSMUST00000184594 196 ntBASIC-1.42□□□□□ -2.64
Ccdc88bQ4QRL3 Gm42845-201ENSMUST00000197766 105 ntBASIC-1.42□□□□□ -2.64
Ccdc88bQ4QRL3 Gm44468-201ENSMUST00000199516 105 ntBASIC-1.42□□□□□ -2.64
Ccdc88bQ4QRL3 Gm24929-201ENSMUST00000083403 139 ntBASIC-1.42□□□□□ -2.64
Ccdc88bQ4QRL3 Gm12106-201ENSMUST00000116006 1200 ntBASIC-1.43□□□□□ -2.64
Ccdc88bQ4QRL3 Gm22319-201ENSMUST00000157147 122 ntBASIC-1.43□□□□□ -2.64
Ccdc88bQ4QRL3 Gm24108-201ENSMUST00000175495 77 ntBASIC-1.43□□□□□ -2.64
Ccdc88bQ4QRL3 Gm24100-201ENSMUST00000178592 79 ntBASIC-1.43□□□□□ -2.64
Ccdc88bQ4QRL3 Rpl23a-ps9-201ENSMUST00000188369 463 ntBASIC-1.43□□□□□ -2.64
Ccdc88bQ4QRL3 Rpl23a-ps11-201ENSMUST00000191583 463 ntBASIC-1.43□□□□□ -2.64
Ccdc88bQ4QRL3 Igkv13-62-1-201ENSMUST00000198690 317 ntBASIC-1.43□□□□□ -2.64
Ccdc88bQ4QRL3 Gm45738-201ENSMUST00000203645 233 ntTSL 5 BASIC-1.43□□□□□ -2.64
Ccdc88bQ4QRL3 Gm23423-201ENSMUST00000082782 106 ntBASIC-1.43□□□□□ -2.64
Ccdc88bQ4QRL3 AC160115.1-201ENSMUST00000224678 1574 ntBASIC-1.43□□□□□ -2.64
Ccdc88bQ4QRL3 Gm25088-201ENSMUST00000101803 79 ntBASIC-1.43□□□□□ -2.64
Ccdc88bQ4QRL3 Gm23431-201ENSMUST00000104006 107 ntBASIC-1.43□□□□□ -2.64
Ccdc88bQ4QRL3 Gm9059-201ENSMUST00000118319 183 ntBASIC-1.43□□□□□ -2.64
Ccdc88bQ4QRL3 Gm12045-201ENSMUST00000122122 573 ntBASIC-1.43□□□□□ -2.64
Ccdc88bQ4QRL3 Gm25898-201ENSMUST00000158303 106 ntBASIC-1.43□□□□□ -2.64
Ccdc88bQ4QRL3 Gm20405-201ENSMUST00000174002 229 ntTSL 5 BASIC-1.43□□□□□ -2.64
Ccdc88bQ4QRL3 Gm22887-201ENSMUST00000178586 107 ntBASIC-1.43□□□□□ -2.64
Ccdc88bQ4QRL3 Gm23002-201ENSMUST00000179221 107 ntBASIC-1.43□□□□□ -2.64
Ccdc88bQ4QRL3 Gm22509-201ENSMUST00000082775 107 ntBASIC-1.43□□□□□ -2.64
Ccdc88bQ4QRL3 Gm26359-201ENSMUST00000158873 101 ntBASIC-1.44□□□□□ -2.64
Ccdc88bQ4QRL3 Gm30484-201ENSMUST00000200327 449 ntTSL 5 BASIC-1.44□□□□□ -2.64
Ccdc88bQ4QRL3 Sva-201ENSMUST00000024059 651 ntAPPRIS P2 TSL 1 (best) BASIC-1.44□□□□□ -2.64
Ccdc88bQ4QRL3 Olfr1094-202ENSMUST00000217509 1693 ntAPPRIS P1 TSL 5 BASIC-1.45□□□□□ -2.64
Ccdc88bQ4QRL3 Gm24233-201ENSMUST00000104317 122 ntBASIC-1.45□□□□□ -2.64
Ccdc88bQ4QRL3 Gm15030-201ENSMUST00000119804 484 ntBASIC-1.45□□□□□ -2.64
Ccdc88bQ4QRL3 Gm23904-201ENSMUST00000157567 124 ntBASIC-1.45□□□□□ -2.64
Ccdc88bQ4QRL3 Mir1931-201ENSMUST00000158589 119 ntBASIC-1.45□□□□□ -2.64
Ccdc88bQ4QRL3 Gm27428-201ENSMUST00000184289 110 ntBASIC-1.45□□□□□ -2.64
Ccdc88bQ4QRL3 4930459L07Rik-201ENSMUST00000199751 420 ntTSL 1 (best) BASIC-1.45□□□□□ -2.64
Ccdc88bQ4QRL3 Gm44327-201ENSMUST00000200068 117 ntBASIC-1.45□□□□□ -2.64
Ccdc88bQ4QRL3 Mir721-201ENSMUST00000200230 88 ntBASIC-1.45□□□□□ -2.64
Ccdc88bQ4QRL3 N4bp2os-201ENSMUST00000201547 235 ntTSL 1 (best) BASIC-1.45□□□□□ -2.64
Ccdc88bQ4QRL3 Gm22753-201ENSMUST00000083657 107 ntBASIC-1.45□□□□□ -2.64
Ccdc88bQ4QRL3 Gm23104-201ENSMUST00000083722 104 ntBASIC-1.45□□□□□ -2.64
Ccdc88bQ4QRL3 Gm15130-201ENSMUST00000132464 663 ntAPPRIS P1 TSL 3 BASIC-1.46□□□□□ -2.64
Ccdc88bQ4QRL3 Gm23857-201ENSMUST00000158379 111 ntBASIC-1.46□□□□□ -2.64
Ccdc88bQ4QRL3 AC158981.3-202ENSMUST00000228906 523 ntBASIC-1.46□□□□□ -2.64
Ccdc88bQ4QRL3 Gm23301-201ENSMUST00000082713 65 ntBASIC-1.46□□□□□ -2.64
Ccdc88bQ4QRL3 Gm25137-201ENSMUST00000083251 110 ntBASIC-1.46□□□□□ -2.64
Ccdc88bQ4QRL3 Mir377-201ENSMUST00000083504 68 ntBASIC-1.46□□□□□ -2.64
Ccdc88bQ4QRL3 Gm23846-201ENSMUST00000083835 107 ntBASIC-1.46□□□□□ -2.64
Ccdc88bQ4QRL3 Gm27415-201ENSMUST00000183720 95 ntBASIC-1.47□□□□□ -2.64
Ccdc88bQ4QRL3 Gm37910-201ENSMUST00000194770 217 ntTSL 5 BASIC-1.47□□□□□ -2.64
Ccdc88bQ4QRL3 Gm22298-201ENSMUST00000082662 133 ntBASIC-1.47□□□□□ -2.64
Ccdc88bQ4QRL3 Gm22974-201ENSMUST00000083301 103 ntBASIC-1.47□□□□□ -2.64
Ccdc88bQ4QRL3 Gm23454-201ENSMUST00000083332 133 ntBASIC-1.47□□□□□ -2.64
Ccdc88bQ4QRL3 Gm22888-201ENSMUST00000158640 77 ntBASIC-1.48□□□□□ -2.65
Ccdc88bQ4QRL3 Gm23196-201ENSMUST00000158806 107 ntBASIC-1.48□□□□□ -2.65
Ccdc88bQ4QRL3 Gm31849-201ENSMUST00000220306 375 ntBASIC-1.48□□□□□ -2.65
Ccdc88bQ4QRL3 Gm26131-201ENSMUST00000082725 110 ntBASIC-1.48□□□□□ -2.65
Ccdc88bQ4QRL3 Gm27047-201ENSMUST00000183072 1819 ntBASIC-1.49□□□□□ -2.65
Ccdc88bQ4QRL3 Gm15177-201ENSMUST00000120491 577 ntBASIC-1.49□□□□□ -2.65
Ccdc88bQ4QRL3 Gm23331-201ENSMUST00000157423 108 ntBASIC-1.49□□□□□ -2.65
Ccdc88bQ4QRL3 Gm24880-201ENSMUST00000158776 85 ntBASIC-1.49□□□□□ -2.65
Retrieved 100 of 76,532 protein–RNA pairs in 145.7 ms