Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 Traj60-201ENSMUST00000167781 54 ntBASIC1.16□□□□□ -2.22
Upf3aQ3ULJ3 Gm26914-201ENSMUST00000182262 223 ntBASIC1.16□□□□□ -2.22
Upf3aQ3ULJ3 Mir6985-201ENSMUST00000184641 61 ntBASIC1.16□□□□□ -2.22
Upf3aQ3ULJ3 Gm44458-201ENSMUST00000196594 143 ntBASIC1.16□□□□□ -2.22
Upf3aQ3ULJ3 AC145736.2-201ENSMUST00000216305 365 ntBASIC1.16□□□□□ -2.22
Upf3aQ3ULJ3 AC152414.2-201ENSMUST00000219620 537 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
Upf3aQ3ULJ3 AC166341.3-201ENSMUST00000221861 114 ntBASIC1.16□□□□□ -2.22
Upf3aQ3ULJ3 Gm24966-201ENSMUST00000082443 79 ntBASIC1.16□□□□□ -2.22
Upf3aQ3ULJ3 Rny1-201ENSMUST00000083767 112 ntBASIC1.16□□□□□ -2.22
Upf3aQ3ULJ3 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
Upf3aQ3ULJ3 Olfr805-203ENSMUST00000216794 3199 ntAPPRIS P1 TSL 5 BASIC1.16□□□□□ -2.22
Upf3aQ3ULJ3 Mir293-201ENSMUST00000104841 80 ntBASIC1.15□□□□□ -2.23
Upf3aQ3ULJ3 Gm15002-201ENSMUST00000118406 452 ntBASIC1.15□□□□□ -2.23
Upf3aQ3ULJ3 Gm24277-201ENSMUST00000158661 104 ntBASIC1.15□□□□□ -2.23
Upf3aQ3ULJ3 Gm22565-201ENSMUST00000175540 69 ntBASIC1.15□□□□□ -2.23
Upf3aQ3ULJ3 Mir6381-201ENSMUST00000183426 87 ntBASIC1.15□□□□□ -2.23
Upf3aQ3ULJ3 Gm29147-201ENSMUST00000186846 315 ntBASIC1.15□□□□□ -2.23
Upf3aQ3ULJ3 Gm29227-201ENSMUST00000187139 315 ntBASIC1.15□□□□□ -2.23
Upf3aQ3ULJ3 Gm29034-201ENSMUST00000188099 315 ntBASIC1.15□□□□□ -2.23
Upf3aQ3ULJ3 Gm28160-201ENSMUST00000191229 315 ntBASIC1.15□□□□□ -2.23
Upf3aQ3ULJ3 Gm38074-201ENSMUST00000193467 145 ntTSL 5 BASIC1.15□□□□□ -2.23
Upf3aQ3ULJ3 Gm37129-201ENSMUST00000195791 315 ntBASIC1.15□□□□□ -2.23
Upf3aQ3ULJ3 Klk1b28-ps-201ENSMUST00000206374 217 ntBASIC1.15□□□□□ -2.23
Upf3aQ3ULJ3 4930598N05Rik-207ENSMUST00000208997 83 ntTSL 5 BASIC1.15□□□□□ -2.23
Upf3aQ3ULJ3 AC132437.1-201ENSMUST00000218308 320 ntBASIC1.15□□□□□ -2.23
Upf3aQ3ULJ3 Defb50-201ENSMUST00000078879 373 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
Upf3aQ3ULJ3 CT030170.3-201ENSMUST00000221205 1815 ntBASIC1.15□□□□□ -2.23
Upf3aQ3ULJ3 Vmn1r75-207ENSMUST00000228646 4466 ntAPPRIS ALT2 BASIC1.15□□□□□ -2.23
Upf3aQ3ULJ3 Trgj3-201ENSMUST00000103562 60 ntAPPRIS P1 BASIC1.14□□□□□ -2.23
Upf3aQ3ULJ3 Gm22485-201ENSMUST00000157990 109 ntBASIC1.14□□□□□ -2.23
Upf3aQ3ULJ3 Gm23339-201ENSMUST00000158962 139 ntBASIC1.14□□□□□ -2.23
Upf3aQ3ULJ3 Gm29512-201ENSMUST00000185544 315 ntBASIC1.14□□□□□ -2.23
Upf3aQ3ULJ3 Gm28110-201ENSMUST00000185782 315 ntBASIC1.14□□□□□ -2.23
Upf3aQ3ULJ3 Gm29057-201ENSMUST00000186468 315 ntBASIC1.14□□□□□ -2.23
Upf3aQ3ULJ3 Gm28737-201ENSMUST00000186808 315 ntBASIC1.14□□□□□ -2.23
Upf3aQ3ULJ3 Gm29118-201ENSMUST00000186908 315 ntBASIC1.14□□□□□ -2.23
Upf3aQ3ULJ3 Gm28433-201ENSMUST00000187085 315 ntBASIC1.14□□□□□ -2.23
Upf3aQ3ULJ3 Gm28759-201ENSMUST00000187621 315 ntBASIC1.14□□□□□ -2.23
Upf3aQ3ULJ3 Gm28831-201ENSMUST00000187739 315 ntBASIC1.14□□□□□ -2.23
Upf3aQ3ULJ3 Gm28752-201ENSMUST00000188340 315 ntBASIC1.14□□□□□ -2.23
Upf3aQ3ULJ3 Gm28569-201ENSMUST00000188748 315 ntBASIC1.14□□□□□ -2.23
Upf3aQ3ULJ3 Gm28120-201ENSMUST00000188812 315 ntBASIC1.14□□□□□ -2.23
Upf3aQ3ULJ3 Gm28369-201ENSMUST00000188993 315 ntBASIC1.14□□□□□ -2.23
Upf3aQ3ULJ3 Gm28861-201ENSMUST00000189681 315 ntBASIC1.14□□□□□ -2.23
Upf3aQ3ULJ3 Gm29180-201ENSMUST00000190003 315 ntBASIC1.14□□□□□ -2.23
Upf3aQ3ULJ3 Tmem167-ps2-201ENSMUST00000190251 214 ntBASIC1.14□□□□□ -2.23
Upf3aQ3ULJ3 Gm29575-201ENSMUST00000190597 315 ntBASIC1.14□□□□□ -2.23
Upf3aQ3ULJ3 Gm29469-201ENSMUST00000191448 315 ntBASIC1.14□□□□□ -2.23
Upf3aQ3ULJ3 Gm26339-201ENSMUST00000102368 99 ntBASIC1.13□□□□□ -2.23
Upf3aQ3ULJ3 Gm22814-201ENSMUST00000157452 104 ntBASIC1.13□□□□□ -2.23
Upf3aQ3ULJ3 Gm26038-201ENSMUST00000158151 106 ntBASIC1.13□□□□□ -2.23
Upf3aQ3ULJ3 Gm21060-201ENSMUST00000179346 168 ntAPPRIS P1 BASIC1.13□□□□□ -2.23
Upf3aQ3ULJ3 Gm27419-201ENSMUST00000184576 109 ntBASIC1.13□□□□□ -2.23
Upf3aQ3ULJ3 Gm28537-201ENSMUST00000189026 315 ntBASIC1.13□□□□□ -2.23
Upf3aQ3ULJ3 Gm29631-201ENSMUST00000191065 315 ntBASIC1.13□□□□□ -2.23
Upf3aQ3ULJ3 Gm19855-201ENSMUST00000210145 249 ntBASIC1.13□□□□□ -2.23
Upf3aQ3ULJ3 Olfr1070-ps1-201ENSMUST00000215939 388 ntBASIC1.13□□□□□ -2.23
Upf3aQ3ULJ3 Mir155-201ENSMUST00000083463 65 ntBASIC1.13□□□□□ -2.23
Upf3aQ3ULJ3 Gm25513-201ENSMUST00000083861 162 ntBASIC1.13□□□□□ -2.23
Upf3aQ3ULJ3 Gm24283-201ENSMUST00000104233 107 ntBASIC1.12□□□□□ -2.23
Upf3aQ3ULJ3 Gm10945-201ENSMUST00000105596 60 ntAPPRIS P1 TSL 5 BASIC1.12□□□□□ -2.23
Upf3aQ3ULJ3 Gm14761-201ENSMUST00000121363 262 ntBASIC1.12□□□□□ -2.23
Upf3aQ3ULJ3 Gm22883-201ENSMUST00000157376 106 ntBASIC1.12□□□□□ -2.23
Upf3aQ3ULJ3 Gm23893-201ENSMUST00000158106 134 ntBASIC1.12□□□□□ -2.23
Upf3aQ3ULJ3 Gm26363-201ENSMUST00000158866 83 ntBASIC1.12□□□□□ -2.23
Upf3aQ3ULJ3 Gm24366-201ENSMUST00000175383 86 ntBASIC1.12□□□□□ -2.23
Upf3aQ3ULJ3 Mir5624-201ENSMUST00000176635 61 ntBASIC1.12□□□□□ -2.23
Upf3aQ3ULJ3 Mir7675-201ENSMUST00000184262 58 ntBASIC1.12□□□□□ -2.23
Upf3aQ3ULJ3 Gm27640-201ENSMUST00000184580 147 ntBASIC1.12□□□□□ -2.23
Upf3aQ3ULJ3 Mir3535-201ENSMUST00000197651 147 ntBASIC1.12□□□□□ -2.23
Upf3aQ3ULJ3 Gm42774-201ENSMUST00000198854 283 ntBASIC1.12□□□□□ -2.23
Upf3aQ3ULJ3 Gm44858-201ENSMUST00000207360 154 ntBASIC1.12□□□□□ -2.23
Upf3aQ3ULJ3 Gm31447-201ENSMUST00000222345 384 ntTSL 3 BASIC1.12□□□□□ -2.23
Upf3aQ3ULJ3 CT025689.3-201ENSMUST00000223817 301 ntBASIC1.12□□□□□ -2.23
Upf3aQ3ULJ3 mt-Tr-201ENSMUST00000082412 68 ntBASIC1.12□□□□□ -2.23
Upf3aQ3ULJ3 Snord96a-201ENSMUST00000082791 81 ntBASIC1.12□□□□□ -2.23
Upf3aQ3ULJ3 mt-Nd4-201ENSMUST00000082414 1378 ntAPPRIS P1 BASIC1.11□□□□□ -2.23
Upf3aQ3ULJ3 Gm13967-201ENSMUST00000120404 380 ntBASIC1.11□□□□□ -2.23
Upf3aQ3ULJ3 Mir1904-201ENSMUST00000122702 80 ntBASIC1.11□□□□□ -2.23
Upf3aQ3ULJ3 Gm22491-201ENSMUST00000157190 102 ntBASIC1.11□□□□□ -2.23
Upf3aQ3ULJ3 Gm26089-201ENSMUST00000157898 107 ntBASIC1.11□□□□□ -2.23
Upf3aQ3ULJ3 Olfr1366-201ENSMUST00000168629 1054 ntAPPRIS ALT2 BASIC1.11□□□□□ -2.23
Upf3aQ3ULJ3 Gm29665-201ENSMUST00000191457 528 ntBASIC1.11□□□□□ -2.23
Upf3aQ3ULJ3 Gm44490-201ENSMUST00000198566 127 ntBASIC1.11□□□□□ -2.23
Upf3aQ3ULJ3 Gm44468-201ENSMUST00000199516 105 ntBASIC1.11□□□□□ -2.23
Upf3aQ3ULJ3 Olfr1366-204ENSMUST00000218154 1054 ntAPPRIS P2 BASIC1.11□□□□□ -2.23
Upf3aQ3ULJ3 Mir22-201ENSMUST00000083595 95 ntBASIC1.11□□□□□ -2.23
Upf3aQ3ULJ3 Mir344-201ENSMUST00000083634 95 ntBASIC1.11□□□□□ -2.23
Upf3aQ3ULJ3 Gm25512-201ENSMUST00000083863 107 ntBASIC1.11□□□□□ -2.23
Upf3aQ3ULJ3 Gm24164-201ENSMUST00000093663 104 ntBASIC1.11□□□□□ -2.23
Upf3aQ3ULJ3 Olfr832-202ENSMUST00000218385 4435 ntAPPRIS P1 TSL 5 BASIC1.1□□□□□ -2.23
Upf3aQ3ULJ3 Gm26135-201ENSMUST00000101993 72 ntBASIC1.1□□□□□ -2.23
Upf3aQ3ULJ3 Gm11794-201ENSMUST00000119446 237 ntBASIC1.1□□□□□ -2.23
Upf3aQ3ULJ3 Gm22279-201ENSMUST00000157200 93 ntBASIC1.1□□□□□ -2.23
Upf3aQ3ULJ3 Gm22164-201ENSMUST00000158413 106 ntBASIC1.1□□□□□ -2.23
Upf3aQ3ULJ3 Snord50b-201ENSMUST00000178497 72 ntBASIC1.1□□□□□ -2.23
Upf3aQ3ULJ3 Gm16399-201ENSMUST00000181423 219 ntBASIC1.1□□□□□ -2.23
Upf3aQ3ULJ3 Ranbp2-ps7-201ENSMUST00000183924 384 ntBASIC1.1□□□□□ -2.23
Upf3aQ3ULJ3 Gm27997-201ENSMUST00000184942 69 ntBASIC1.1□□□□□ -2.23
Upf3aQ3ULJ3 AL603630.1-201ENSMUST00000214781 147 ntBASIC1.1□□□□□ -2.23
Retrieved 100 of 76,532 protein–RNA pairs in 85.3 ms