Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 Gm25111-201ENSMUST00000116686 147 ntBASIC1.4□□□□□ -2.19
Trafd1Q3UDK1 Gm12797-201ENSMUST00000118645 273 ntBASIC1.4□□□□□ -2.19
Trafd1Q3UDK1 Gm25664-201ENSMUST00000157697 107 ntBASIC1.4□□□□□ -2.19
Trafd1Q3UDK1 Gm23558-201ENSMUST00000157823 80 ntBASIC1.4□□□□□ -2.19
Trafd1Q3UDK1 Gm23182-201ENSMUST00000158688 135 ntBASIC1.4□□□□□ -2.19
Trafd1Q3UDK1 Gm25958-201ENSMUST00000175114 71 ntBASIC1.4□□□□□ -2.19
Trafd1Q3UDK1 Gm25615-201ENSMUST00000177836 94 ntBASIC1.4□□□□□ -2.19
Trafd1Q3UDK1 Snord50b-201ENSMUST00000178497 72 ntBASIC1.4□□□□□ -2.19
Trafd1Q3UDK1 Gm29347-201ENSMUST00000186695 449 ntTSL 3 BASIC1.4□□□□□ -2.19
Trafd1Q3UDK1 Gm28849-201ENSMUST00000188127 174 ntBASIC1.4□□□□□ -2.19
Trafd1Q3UDK1 Gm44353-201ENSMUST00000200618 138 ntBASIC1.4□□□□□ -2.19
Trafd1Q3UDK1 AC127371.3-201ENSMUST00000228129 415 ntBASIC1.4□□□□□ -2.19
Trafd1Q3UDK1 Mir155-201ENSMUST00000083463 65 ntBASIC1.4□□□□□ -2.19
Trafd1Q3UDK1 Gm25513-201ENSMUST00000083861 162 ntBASIC1.4□□□□□ -2.19
Trafd1Q3UDK1 Gm10222-201ENSMUST00000088336 294 ntBASIC1.4□□□□□ -2.19
Trafd1Q3UDK1 Olfr1222-203ENSMUST00000215816 3796 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.19
Trafd1Q3UDK1 Olfr136-205ENSMUST00000216963 1821 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.19
Trafd1Q3UDK1 Gm26339-201ENSMUST00000102368 99 ntBASIC1.39□□□□□ -2.19
Trafd1Q3UDK1 Gm25992-201ENSMUST00000102437 109 ntBASIC1.39□□□□□ -2.19
Trafd1Q3UDK1 Olfr1172-ps1-201ENSMUST00000121530 192 ntBASIC1.39□□□□□ -2.19
Trafd1Q3UDK1 n-R5s15-201ENSMUST00000122635 111 ntBASIC1.39□□□□□ -2.19
Trafd1Q3UDK1 Gm22321-201ENSMUST00000157152 104 ntBASIC1.39□□□□□ -2.19
Trafd1Q3UDK1 Gm25914-201ENSMUST00000157618 153 ntBASIC1.39□□□□□ -2.19
Trafd1Q3UDK1 Gm24851-201ENSMUST00000158028 103 ntBASIC1.39□□□□□ -2.19
Trafd1Q3UDK1 Gm22075-201ENSMUST00000158599 192 ntBASIC1.39□□□□□ -2.19
Trafd1Q3UDK1 Mir8116-201ENSMUST00000184134 97 ntBASIC1.39□□□□□ -2.19
Trafd1Q3UDK1 Gm37693-201ENSMUST00000194562 234 ntBASIC1.39□□□□□ -2.19
Trafd1Q3UDK1 Gm43563-201ENSMUST00000196761 198 ntBASIC1.39□□□□□ -2.19
Trafd1Q3UDK1 Gm16976-205ENSMUST00000227324 226 ntBASIC1.39□□□□□ -2.19
Trafd1Q3UDK1 Gm10226-201ENSMUST00000072133 255 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
Trafd1Q3UDK1 Defb50-201ENSMUST00000078879 373 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
Trafd1Q3UDK1 Igkv4-63-201ENSMUST00000103351 286 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
Trafd1Q3UDK1 Fau-ps1-201ENSMUST00000119675 252 ntBASIC1.38□□□□□ -2.19
Trafd1Q3UDK1 Gm24909-201ENSMUST00000157290 280 ntBASIC1.38□□□□□ -2.19
Trafd1Q3UDK1 Gm22450-201ENSMUST00000179641 107 ntBASIC1.38□□□□□ -2.19
Trafd1Q3UDK1 Gm25473-201ENSMUST00000180191 107 ntBASIC1.38□□□□□ -2.19
Trafd1Q3UDK1 Mir6336-201ENSMUST00000183581 130 ntBASIC1.38□□□□□ -2.19
Trafd1Q3UDK1 Gm27493-201ENSMUST00000184128 78 ntBASIC1.38□□□□□ -2.19
Trafd1Q3UDK1 Mir7665-201ENSMUST00000184907 63 ntBASIC1.38□□□□□ -2.19
Trafd1Q3UDK1 Sprr2h-202ENSMUST00000191886 297 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
Trafd1Q3UDK1 AC139186.1-201ENSMUST00000197610 94 ntBASIC1.38□□□□□ -2.19
Trafd1Q3UDK1 Gm42774-201ENSMUST00000198854 283 ntBASIC1.38□□□□□ -2.19
Trafd1Q3UDK1 Gm23370-201ENSMUST00000199545 130 ntBASIC1.38□□□□□ -2.19
Trafd1Q3UDK1 Gm24856-201ENSMUST00000082809 107 ntBASIC1.38□□□□□ -2.19
Trafd1Q3UDK1 Gm26071-201ENSMUST00000083261 107 ntBASIC1.38□□□□□ -2.19
Trafd1Q3UDK1 Gm24521-201ENSMUST00000083958 107 ntBASIC1.38□□□□□ -2.19
Trafd1Q3UDK1 Gm21833-201ENSMUST00000177665 1500 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
Trafd1Q3UDK1 Mir223-201ENSMUST00000102112 110 ntBASIC1.37□□□□□ -2.19
Trafd1Q3UDK1 Gm23336-201ENSMUST00000117023 123 ntBASIC1.37□□□□□ -2.19
Trafd1Q3UDK1 Gm14937-201ENSMUST00000119709 208 ntBASIC1.37□□□□□ -2.19
Trafd1Q3UDK1 Gm12869-201ENSMUST00000156265 344 ntTSL 2 BASIC1.37□□□□□ -2.19
Trafd1Q3UDK1 Gm22097-201ENSMUST00000157929 278 ntBASIC1.37□□□□□ -2.19
Trafd1Q3UDK1 Gm22118-201ENSMUST00000175593 171 ntBASIC1.37□□□□□ -2.19
Trafd1Q3UDK1 Mir6540-201ENSMUST00000184886 108 ntBASIC1.37□□□□□ -2.19
Trafd1Q3UDK1 Gm27332-201ENSMUST00000184893 112 ntBASIC1.37□□□□□ -2.19
Trafd1Q3UDK1 Gm28921-201ENSMUST00000190219 378 ntBASIC1.37□□□□□ -2.19
Trafd1Q3UDK1 Gm21064-202ENSMUST00000190583 278 ntBASIC1.37□□□□□ -2.19
Trafd1Q3UDK1 Gm45092-201ENSMUST00000205944 545 ntTSL 3 BASIC1.37□□□□□ -2.19
Trafd1Q3UDK1 AC159896.1-201ENSMUST00000215264 215 ntBASIC1.37□□□□□ -2.19
Trafd1Q3UDK1 Gm46993-201ENSMUST00000220708 259 ntBASIC1.37□□□□□ -2.19
Trafd1Q3UDK1 AC154636.2-201ENSMUST00000222538 161 ntBASIC1.37□□□□□ -2.19
Trafd1Q3UDK1 AC098718.2-201ENSMUST00000226822 285 ntBASIC1.37□□□□□ -2.19
Trafd1Q3UDK1 Gm25204-201ENSMUST00000082843 106 ntBASIC1.37□□□□□ -2.19
Trafd1Q3UDK1 Snora3-201ENSMUST00000083082 132 ntBASIC1.37□□□□□ -2.19
Trafd1Q3UDK1 Olfr1151-202ENSMUST00000217376 2866 ntAPPRIS P1 TSL 5 BASIC1.37□□□□□ -2.19
Trafd1Q3UDK1 Ppp4r3c-ps-201ENSMUST00000151416 2445 ntBASIC1.36□□□□□ -2.19
Trafd1Q3UDK1 Gm14674-201ENSMUST00000117816 342 ntBASIC1.36□□□□□ -2.19
Trafd1Q3UDK1 Gm12309-201ENSMUST00000119889 182 ntBASIC1.36□□□□□ -2.19
Trafd1Q3UDK1 Gm24262-201ENSMUST00000157431 144 ntBASIC1.36□□□□□ -2.19
Trafd1Q3UDK1 Mir1951-201ENSMUST00000157981 89 ntBASIC1.36□□□□□ -2.19
Trafd1Q3UDK1 Gm26287-201ENSMUST00000158887 81 ntBASIC1.36□□□□□ -2.19
Trafd1Q3UDK1 Gm25035-201ENSMUST00000175414 77 ntBASIC1.36□□□□□ -2.19
Trafd1Q3UDK1 Gm23100-201ENSMUST00000083455 141 ntBASIC1.36□□□□□ -2.19
Trafd1Q3UDK1 Gm6020-201ENSMUST00000092094 66 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
Trafd1Q3UDK1 AC153964.2-201ENSMUST00000217704 2474 ntBASIC1.35□□□□□ -2.19
Trafd1Q3UDK1 Slco6c1-201ENSMUST00000027569 2747 ntAPPRIS P2 TSL 1 (best) BASIC1.35□□□□□ -2.19
Trafd1Q3UDK1 Gm14491-201ENSMUST00000121919 199 ntBASIC1.35□□□□□ -2.19
Trafd1Q3UDK1 Gm23656-201ENSMUST00000122626 112 ntBASIC1.35□□□□□ -2.19
Trafd1Q3UDK1 Gm23390-201ENSMUST00000157393 106 ntBASIC1.35□□□□□ -2.19
Trafd1Q3UDK1 Gm22082-201ENSMUST00000157587 161 ntBASIC1.35□□□□□ -2.19
Trafd1Q3UDK1 Gm23122-201ENSMUST00000157645 103 ntBASIC1.35□□□□□ -2.19
Trafd1Q3UDK1 Gm25333-201ENSMUST00000158035 246 ntBASIC1.35□□□□□ -2.19
Trafd1Q3UDK1 Gm24668-201ENSMUST00000158935 104 ntBASIC1.35□□□□□ -2.19
Trafd1Q3UDK1 Mir3057-201ENSMUST00000175040 91 ntBASIC1.35□□□□□ -2.19
Trafd1Q3UDK1 Gm25024-201ENSMUST00000179667 104 ntBASIC1.35□□□□□ -2.19
Trafd1Q3UDK1 Mir7683-201ENSMUST00000183842 61 ntBASIC1.35□□□□□ -2.19
Trafd1Q3UDK1 Gm27545-201ENSMUST00000184755 202 ntBASIC1.35□□□□□ -2.19
Trafd1Q3UDK1 Mir6419-201ENSMUST00000184784 113 ntBASIC1.35□□□□□ -2.19
Trafd1Q3UDK1 Gm28912-201ENSMUST00000189001 234 ntBASIC1.35□□□□□ -2.19
Trafd1Q3UDK1 Olfr375-ps1-201ENSMUST00000198131 249 ntBASIC1.35□□□□□ -2.19
Trafd1Q3UDK1 Gm44959-201ENSMUST00000209127 231 ntBASIC1.35□□□□□ -2.19
Trafd1Q3UDK1 Gm24805-201ENSMUST00000082931 104 ntBASIC1.35□□□□□ -2.19
Trafd1Q3UDK1 Olfr1002-202ENSMUST00000215548 2295 ntAPPRIS P1 TSL 5 BASIC1.35□□□□□ -2.19
Trafd1Q3UDK1 Zfp981-203ENSMUST00000179175 2953 ntAPPRIS P1 TSL 2 BASIC1.34□□□□□ -2.19
Trafd1Q3UDK1 Gm22784-201ENSMUST00000104088 132 ntBASIC1.34□□□□□ -2.19
Trafd1Q3UDK1 Gm14837-201ENSMUST00000119688 206 ntBASIC1.34□□□□□ -2.19
Trafd1Q3UDK1 Gm24392-201ENSMUST00000158136 103 ntBASIC1.34□□□□□ -2.19
Trafd1Q3UDK1 Gm25643-201ENSMUST00000158874 103 ntBASIC1.34□□□□□ -2.19
Trafd1Q3UDK1 Gm24667-201ENSMUST00000158938 103 ntBASIC1.34□□□□□ -2.19
Trafd1Q3UDK1 Vmn2r-ps116-201ENSMUST00000175997 126 ntBASIC1.34□□□□□ -2.19
Retrieved 100 of 76,532 protein–RNA pairs in 86.4 ms