Protein–RNA interactions for Protein: Q3U319

Rnf40, E3 ubiquitin-protein ligase BRE1B, mousemouse

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf40Q3U319 Mir7658-201ENSMUST00000184043 57 ntBASIC3.58□□□□□ -1.84
Rnf40Q3U319 Gm19774-201ENSMUST00000190667 114 ntBASIC3.58□□□□□ -1.84
Rnf40Q3U319 Gm37698-201ENSMUST00000192605 463 ntBASIC3.58□□□□□ -1.84
Rnf40Q3U319 Gm43373-201ENSMUST00000202552 2870 ntBASIC3.57□□□□□ -1.84
Rnf40Q3U319 Pcdh11x-206ENSMUST00000192677 9097 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
Rnf40Q3U319 Olfr1258-201ENSMUST00000102609 7007 ntAPPRIS P1 TSL 3 BASIC3.57□□□□□ -1.84
Rnf40Q3U319 Vmn1r185-207ENSMUST00000227695 5292 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Rnf40Q3U319 Hhla1-201ENSMUST00000100584 2262 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Rnf40Q3U319 Gm12252-201ENSMUST00000119517 219 ntBASIC3.57□□□□□ -1.84
Rnf40Q3U319 Gm24850-201ENSMUST00000158029 119 ntBASIC3.57□□□□□ -1.84
Rnf40Q3U319 Gm25488-201ENSMUST00000158728 118 ntBASIC3.57□□□□□ -1.84
Rnf40Q3U319 Mir3106-201ENSMUST00000175401 82 ntBASIC3.57□□□□□ -1.84
Rnf40Q3U319 Gm5224-201ENSMUST00000183060 350 ntBASIC3.57□□□□□ -1.84
Rnf40Q3U319 Gm24527-201ENSMUST00000082920 107 ntBASIC3.57□□□□□ -1.84
Rnf40Q3U319 Olfr347-202ENSMUST00000216882 3385 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Rnf40Q3U319 Gm37158-201ENSMUST00000191652 5704 ntBASIC3.56□□□□□ -1.84
Rnf40Q3U319 Vmn2r-ps47-201ENSMUST00000174515 2557 ntBASIC3.56□□□□□ -1.84
Rnf40Q3U319 Gm24890-201ENSMUST00000104389 102 ntBASIC3.56□□□□□ -1.84
Rnf40Q3U319 n-R5s39-201ENSMUST00000122613 108 ntBASIC3.56□□□□□ -1.84
Rnf40Q3U319 Gm15903-201ENSMUST00000155796 310 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
Rnf40Q3U319 Gm23715-201ENSMUST00000157354 106 ntBASIC3.56□□□□□ -1.84
Rnf40Q3U319 Gm23592-201ENSMUST00000157859 117 ntBASIC3.56□□□□□ -1.84
Rnf40Q3U319 Gm22387-201ENSMUST00000158191 131 ntBASIC3.56□□□□□ -1.84
Rnf40Q3U319 Gm23351-201ENSMUST00000158427 125 ntBASIC3.56□□□□□ -1.84
Rnf40Q3U319 Gm25976-201ENSMUST00000158695 130 ntBASIC3.56□□□□□ -1.84
Rnf40Q3U319 Gm25354-201ENSMUST00000179110 105 ntBASIC3.56□□□□□ -1.84
Rnf40Q3U319 Gm24674-201ENSMUST00000179194 104 ntBASIC3.56□□□□□ -1.84
Rnf40Q3U319 Gm44099-201ENSMUST00000203299 112 ntBASIC3.56□□□□□ -1.84
Rnf40Q3U319 Olfr1421-ps1-201ENSMUST00000208900 208 ntBASIC3.56□□□□□ -1.84
Rnf40Q3U319 Gm5239-201ENSMUST00000081864 369 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Rnf40Q3U319 Mir411-201ENSMUST00000083543 82 ntBASIC3.56□□□□□ -1.84
Rnf40Q3U319 Mir132-201ENSMUST00000083603 66 ntBASIC3.56□□□□□ -1.84
Rnf40Q3U319 Gm8935-201ENSMUST00000066794 2798 ntBASIC3.55□□□□□ -1.84
Rnf40Q3U319 Mir1198-201ENSMUST00000116995 121 ntBASIC3.55□□□□□ -1.84
Rnf40Q3U319 Gm12309-201ENSMUST00000119889 182 ntBASIC3.55□□□□□ -1.84
Rnf40Q3U319 Gm11749-201ENSMUST00000127327 184 ntTSL 2 BASIC3.55□□□□□ -1.84
Rnf40Q3U319 Gm23671-201ENSMUST00000157472 103 ntBASIC3.55□□□□□ -1.84
Rnf40Q3U319 Gm24505-201ENSMUST00000157682 126 ntBASIC3.55□□□□□ -1.84
Rnf40Q3U319 Gm10357-201ENSMUST00000159886 264 ntBASIC3.55□□□□□ -1.84
Rnf40Q3U319 Mir7047-201ENSMUST00000184595 64 ntBASIC3.55□□□□□ -1.84
Rnf40Q3U319 Gm44399-201ENSMUST00000205043 226 ntBASIC3.55□□□□□ -1.84
Rnf40Q3U319 Gm44734-201ENSMUST00000206025 237 ntTSL 5 BASIC3.55□□□□□ -1.84
Rnf40Q3U319 Gm45544-201ENSMUST00000211130 88 ntBASIC3.55□□□□□ -1.84
Rnf40Q3U319 Gm26441-201ENSMUST00000082590 104 ntBASIC3.55□□□□□ -1.84
Rnf40Q3U319 Gm24536-201ENSMUST00000083144 107 ntBASIC3.55□□□□□ -1.84
Rnf40Q3U319 Snord80-201ENSMUST00000083801 81 ntBASIC3.55□□□□□ -1.84
Rnf40Q3U319 Olfr1046-202ENSMUST00000213987 2770 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Rnf40Q3U319 AC104897.1-201ENSMUST00000222638 3628 ntBASIC3.54□□□□□ -1.84
Rnf40Q3U319 Gm25748-201ENSMUST00000175487 70 ntBASIC3.54□□□□□ -1.84
Rnf40Q3U319 Gm10067-201ENSMUST00000179462 348 ntBASIC3.54□□□□□ -1.84
Rnf40Q3U319 Mir34a-201ENSMUST00000083559 102 ntBASIC3.54□□□□□ -1.84
Rnf40Q3U319 Snora33-201ENSMUST00000093556 129 ntBASIC3.54□□□□□ -1.84
Rnf40Q3U319 Vmn1r211-202ENSMUST00000228645 5447 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Rnf40Q3U319 Gm26339-201ENSMUST00000102368 99 ntBASIC3.53□□□□□ -1.84
Rnf40Q3U319 Gm26145-201ENSMUST00000104476 127 ntBASIC3.53□□□□□ -1.84
Rnf40Q3U319 Gm25061-201ENSMUST00000104665 107 ntBASIC3.53□□□□□ -1.84
Rnf40Q3U319 Mir713-201ENSMUST00000178651 108 ntBASIC3.53□□□□□ -1.84
Rnf40Q3U319 Gm27379-201ENSMUST00000183730 123 ntBASIC3.53□□□□□ -1.84
Rnf40Q3U319 Gm20108-201ENSMUST00000219977 153 ntBASIC3.53□□□□□ -1.84
Rnf40Q3U319 Snord15a-201ENSMUST00000083888 148 ntBASIC3.53□□□□□ -1.84
Rnf40Q3U319 4932412D23Rik-203ENSMUST00000142270 4105 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
Rnf40Q3U319 Gm43879-201ENSMUST00000203811 3760 ntBASIC3.53□□□□□ -1.84
Rnf40Q3U319 Zfy2-201ENSMUST00000115891 2816 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
Rnf40Q3U319 Olfr469-202ENSMUST00000213252 3164 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
Rnf40Q3U319 Fsip2-203ENSMUST00000143764 21116 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
Rnf40Q3U319 Vmn2r42-205ENSMUST00000146278 3086 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
Rnf40Q3U319 Gm25104-201ENSMUST00000122476 163 ntBASIC3.52□□□□□ -1.85
Rnf40Q3U319 Gm23986-201ENSMUST00000157144 63 ntBASIC3.52□□□□□ -1.85
Rnf40Q3U319 Gm23826-201ENSMUST00000157394 119 ntBASIC3.52□□□□□ -1.85
Rnf40Q3U319 Gm8739-201ENSMUST00000185962 181 ntTSL 5 BASIC3.52□□□□□ -1.85
Rnf40Q3U319 Gm37001-201ENSMUST00000193377 190 ntBASIC3.52□□□□□ -1.85
Rnf40Q3U319 Gm45268-201ENSMUST00000210046 370 ntBASIC3.52□□□□□ -1.85
Rnf40Q3U319 Olfr1216-203ENSMUST00000217000 3667 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
Rnf40Q3U319 Gm3055-202ENSMUST00000218939 4067 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
Rnf40Q3U319 Zfp781-202ENSMUST00000219144 4067 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
Rnf40Q3U319 Zfp979-201ENSMUST00000037565 2558 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
Rnf40Q3U319 Olfr1193-203ENSMUST00000216767 3690 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
Rnf40Q3U319 Pak3-205ENSMUST00000112868 8163 ntAPPRIS P3 TSL 5 BASIC3.51□□□□□ -1.85
Rnf40Q3U319 Olfr389-202ENSMUST00000124927 2781 ntAPPRIS P1 TSL 3 BASIC3.51□□□□□ -1.85
Rnf40Q3U319 Gm25765-201ENSMUST00000104100 132 ntBASIC3.51□□□□□ -1.85
Rnf40Q3U319 Gm24998-201ENSMUST00000157908 89 ntBASIC3.51□□□□□ -1.85
Rnf40Q3U319 Gm24503-201ENSMUST00000158454 135 ntBASIC3.51□□□□□ -1.85
Rnf40Q3U319 Gm23917-201ENSMUST00000175256 98 ntBASIC3.51□□□□□ -1.85
Rnf40Q3U319 Gm23090-201ENSMUST00000177331 78 ntBASIC3.51□□□□□ -1.85
Rnf40Q3U319 Gm37428-201ENSMUST00000193886 137 ntBASIC3.51□□□□□ -1.85
Rnf40Q3U319 Gm37007-201ENSMUST00000194234 319 ntBASIC3.51□□□□□ -1.85
Rnf40Q3U319 Mir129b-201ENSMUST00000197461 65 ntBASIC3.51□□□□□ -1.85
Rnf40Q3U319 Mroh9-201ENSMUST00000096608 2956 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
Rnf40Q3U319 Olfr1442-204ENSMUST00000208657 3148 ntAPPRIS P1 TSL 3 BASIC3.51□□□□□ -1.85
Rnf40Q3U319 Gm18337-201ENSMUST00000219023 5762 ntBASIC3.51□□□□□ -1.85
Rnf40Q3U319 Zfp600-204ENSMUST00000168483 4244 ntAPPRIS P1 TSL 2 BASIC3.51□□□□□ -1.85
Rnf40Q3U319 Olfr194-203ENSMUST00000216519 3705 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
Rnf40Q3U319 Tlr8-201ENSMUST00000049023 3158 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
Rnf40Q3U319 Vmn1r80-205ENSMUST00000227755 10455 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
Rnf40Q3U319 Gm26075-201ENSMUST00000104062 121 ntBASIC3.5□□□□□ -1.85
Rnf40Q3U319 Gm23011-201ENSMUST00000104148 132 ntBASIC3.5□□□□□ -1.85
Rnf40Q3U319 Gm14282-201ENSMUST00000119484 240 ntBASIC3.5□□□□□ -1.85
Rnf40Q3U319 Gm24238-201ENSMUST00000157792 98 ntBASIC3.5□□□□□ -1.85
Rnf40Q3U319 Gm24637-201ENSMUST00000158674 85 ntBASIC3.5□□□□□ -1.85
Rnf40Q3U319 Gm24345-201ENSMUST00000158706 124 ntBASIC3.5□□□□□ -1.85
Retrieved 100 of 76,532 protein–RNA pairs in 89 ms