Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Rhox11-ps3-201ENSMUST00000121166 233 ntBASIC0.66□□□□□ -2.3
Trim43aQ3TL54 A130030D18Rik-201ENSMUST00000128608 654 ntTSL 1 (best) BASIC0.66□□□□□ -2.3
Trim43aQ3TL54 Gm16265-201ENSMUST00000134558 108 ntBASIC0.66□□□□□ -2.3
Trim43aQ3TL54 Gm15446-203ENSMUST00000170826 192 ntTSL 5 BASIC0.66□□□□□ -2.3
Trim43aQ3TL54 Gm25750-201ENSMUST00000175483 112 ntBASIC0.66□□□□□ -2.3
Trim43aQ3TL54 Gm27410-201ENSMUST00000183851 115 ntBASIC0.66□□□□□ -2.3
Trim43aQ3TL54 Olfr1064-ps1-201ENSMUST00000213670 600 ntBASIC0.66□□□□□ -2.3
Trim43aQ3TL54 CT485607.2-201ENSMUST00000214650 91 ntBASIC0.66□□□□□ -2.3
Trim43aQ3TL54 Gm40604-202ENSMUST00000219541 522 ntTSL 5 BASIC0.66□□□□□ -2.3
Trim43aQ3TL54 Gm31447-201ENSMUST00000222345 384 ntTSL 3 BASIC0.66□□□□□ -2.3
Trim43aQ3TL54 Gm23140-201ENSMUST00000082487 107 ntBASIC0.66□□□□□ -2.3
Trim43aQ3TL54 Mir33-201ENSMUST00000083531 69 ntBASIC0.66□□□□□ -2.3
Trim43aQ3TL54 Gm21876-201ENSMUST00000096511 282 ntAPPRIS P1 TSL 5 BASIC0.66□□□□□ -2.3
Trim43aQ3TL54 Gm26338-201ENSMUST00000102372 110 ntBASIC0.65□□□□□ -2.31
Trim43aQ3TL54 Gm23203-201ENSMUST00000104374 107 ntBASIC0.65□□□□□ -2.31
Trim43aQ3TL54 Gm11794-201ENSMUST00000119446 237 ntBASIC0.65□□□□□ -2.31
Trim43aQ3TL54 Gm24401-201ENSMUST00000157868 91 ntBASIC0.65□□□□□ -2.31
Trim43aQ3TL54 Gm27539-201ENSMUST00000184971 224 ntBASIC0.65□□□□□ -2.31
Trim43aQ3TL54 Gm28408-201ENSMUST00000191557 463 ntBASIC0.65□□□□□ -2.31
Trim43aQ3TL54 Gm44396-201ENSMUST00000199843 114 ntBASIC0.65□□□□□ -2.31
Trim43aQ3TL54 Gm44811-201ENSMUST00000209120 228 ntBASIC0.65□□□□□ -2.31
Trim43aQ3TL54 CT485612.2-201ENSMUST00000223014 151 ntBASIC0.65□□□□□ -2.31
Trim43aQ3TL54 2210407C18Rik-201ENSMUST00000048801 876 ntAPPRIS P1 TSL 1 (best) BASIC0.65□□□□□ -2.31
Trim43aQ3TL54 Gm22884-201ENSMUST00000083127 140 ntBASIC0.65□□□□□ -2.31
Trim43aQ3TL54 Snord32a-201ENSMUST00000083285 83 ntBASIC0.65□□□□□ -2.31
Trim43aQ3TL54 Gm23126-201ENSMUST00000104260 134 ntBASIC0.64□□□□□ -2.31
Trim43aQ3TL54 n-R5s63-201ENSMUST00000122756 103 ntBASIC0.64□□□□□ -2.31
Trim43aQ3TL54 Gm23059-201ENSMUST00000158978 107 ntBASIC0.64□□□□□ -2.31
Trim43aQ3TL54 BC050972-201ENSMUST00000168475 526 ntTSL 3 BASIC0.64□□□□□ -2.31
Trim43aQ3TL54 Gm44085-201ENSMUST00000205056 372 ntTSL 3 BASIC0.64□□□□□ -2.31
Trim43aQ3TL54 Gm23614-201ENSMUST00000082598 107 ntBASIC0.64□□□□□ -2.31
Trim43aQ3TL54 AC160115.1-201ENSMUST00000224678 1574 ntBASIC0.63□□□□□ -2.31
Trim43aQ3TL54 Gm13577-201ENSMUST00000121365 205 ntBASIC0.63□□□□□ -2.31
Trim43aQ3TL54 Gm14846-201ENSMUST00000121868 216 ntBASIC0.63□□□□□ -2.31
Trim43aQ3TL54 Gm22985-201ENSMUST00000122754 116 ntBASIC0.63□□□□□ -2.31
Trim43aQ3TL54 Gm23542-201ENSMUST00000158208 96 ntBASIC0.63□□□□□ -2.31
Trim43aQ3TL54 Mir7079-201ENSMUST00000184697 69 ntBASIC0.63□□□□□ -2.31
Trim43aQ3TL54 Gm44326-201ENSMUST00000198226 101 ntBASIC0.63□□□□□ -2.31
Trim43aQ3TL54 Gm44052-201ENSMUST00000203382 396 ntBASIC0.63□□□□□ -2.31
Trim43aQ3TL54 AC157476.1-201ENSMUST00000215555 169 ntBASIC0.63□□□□□ -2.31
Trim43aQ3TL54 AC166358.7-201ENSMUST00000221132 108 ntBASIC0.63□□□□□ -2.31
Trim43aQ3TL54 AC125543.5-201ENSMUST00000222799 108 ntBASIC0.63□□□□□ -2.31
Trim43aQ3TL54 Mir32-201ENSMUST00000083610 70 ntBASIC0.63□□□□□ -2.31
Trim43aQ3TL54 Mir465b-1-201ENSMUST00000103940 79 ntBASIC0.62□□□□□ -2.31
Trim43aQ3TL54 Mir465b-2-201ENSMUST00000104662 79 ntBASIC0.62□□□□□ -2.31
Trim43aQ3TL54 Gm11042-201ENSMUST00000110441 120 ntAPPRIS P1 TSL 5 BASIC0.62□□□□□ -2.31
Trim43aQ3TL54 Gm26914-201ENSMUST00000182262 223 ntBASIC0.62□□□□□ -2.31
Trim43aQ3TL54 Gm37337-201ENSMUST00000192601 993 ntBASIC0.62□□□□□ -2.31
Trim43aQ3TL54 Gm37997-201ENSMUST00000193515 267 ntBASIC0.62□□□□□ -2.31
Trim43aQ3TL54 AL935138.1-201ENSMUST00000215309 196 ntBASIC0.62□□□□□ -2.31
Trim43aQ3TL54 Gm24311-201ENSMUST00000082570 104 ntBASIC0.62□□□□□ -2.31
Trim43aQ3TL54 Gm24523-201ENSMUST00000083965 132 ntBASIC0.62□□□□□ -2.31
Trim43aQ3TL54 AC127302.3-201ENSMUST00000215480 2791 ntBASIC0.62□□□□□ -2.31
Trim43aQ3TL54 Gm23142-201ENSMUST00000101848 105 ntBASIC0.61□□□□□ -2.31
Trim43aQ3TL54 Gm26240-201ENSMUST00000101893 105 ntBASIC0.61□□□□□ -2.31
Trim43aQ3TL54 Mir695-201ENSMUST00000102261 109 ntBASIC0.61□□□□□ -2.31
Trim43aQ3TL54 Trgj3-201ENSMUST00000103562 60 ntAPPRIS P1 BASIC0.61□□□□□ -2.31
Trim43aQ3TL54 Zfp967-201ENSMUST00000108997 417 ntTSL 3 BASIC0.61□□□□□ -2.31
Trim43aQ3TL54 Zfp969-201ENSMUST00000109027 417 ntTSL 3 BASIC0.61□□□□□ -2.31
Trim43aQ3TL54 Zfp965-203ENSMUST00000109043 417 ntTSL 5 BASIC0.61□□□□□ -2.31
Trim43aQ3TL54 Gm11798-201ENSMUST00000119150 421 ntBASIC0.61□□□□□ -2.31
Trim43aQ3TL54 1700047A11Rik-202ENSMUST00000153552 622 ntTSL 1 (best) BASIC0.61□□□□□ -2.31
Trim43aQ3TL54 Gm22791-201ENSMUST00000157232 145 ntBASIC0.61□□□□□ -2.31
Trim43aQ3TL54 CT025526.1-201ENSMUST00000217327 267 ntBASIC0.61□□□□□ -2.31
Trim43aQ3TL54 Gm25697-201ENSMUST00000082902 98 ntBASIC0.61□□□□□ -2.31
Trim43aQ3TL54 Mir490-201ENSMUST00000093567 84 ntBASIC0.61□□□□□ -2.31
Trim43aQ3TL54 Gm23321-201ENSMUST00000104465 126 ntBASIC0.6□□□□□ -2.31
Trim43aQ3TL54 Mup-ps22-201ENSMUST00000121611 243 ntBASIC0.6□□□□□ -2.31
Trim43aQ3TL54 Gm14773-201ENSMUST00000125932 451 ntTSL 2 BASIC0.6□□□□□ -2.31
Trim43aQ3TL54 Gm23232-201ENSMUST00000157300 105 ntBASIC0.6□□□□□ -2.31
Trim43aQ3TL54 Mir3070a-201ENSMUST00000175468 89 ntBASIC0.6□□□□□ -2.31
Trim43aQ3TL54 Obox4-ps37-201ENSMUST00000177223 276 ntBASIC0.6□□□□□ -2.31
Trim43aQ3TL54 Gm19777-201ENSMUST00000191940 358 ntBASIC0.6□□□□□ -2.31
Trim43aQ3TL54 Olfr241-ps1-201ENSMUST00000197024 633 ntBASIC0.6□□□□□ -2.31
Trim43aQ3TL54 AC102369.1-201ENSMUST00000218415 373 ntBASIC0.6□□□□□ -2.31
Trim43aQ3TL54 AC131720.2-201ENSMUST00000220420 431 ntBASIC0.6□□□□□ -2.31
Trim43aQ3TL54 Gm22302-201ENSMUST00000082657 106 ntBASIC0.6□□□□□ -2.31
Trim43aQ3TL54 AC164297.1-201ENSMUST00000224484 1561 ntBASIC0.59□□□□□ -2.31
Trim43aQ3TL54 Trbv17-201ENSMUST00000103275 374 ntAPPRIS P1 BASIC0.59□□□□□ -2.31
Trim43aQ3TL54 Gm24283-201ENSMUST00000104233 107 ntBASIC0.59□□□□□ -2.31
Trim43aQ3TL54 Vmn1r-ps31-201ENSMUST00000174112 238 ntBASIC0.59□□□□□ -2.31
Trim43aQ3TL54 Gm24810-201ENSMUST00000175317 70 ntBASIC0.59□□□□□ -2.31
Trim43aQ3TL54 Gm29229-201ENSMUST00000188874 323 ntBASIC0.59□□□□□ -2.31
Trim43aQ3TL54 Gm29490-201ENSMUST00000190923 342 ntBASIC0.59□□□□□ -2.31
Trim43aQ3TL54 Gm28288-201ENSMUST00000191019 214 ntBASIC0.59□□□□□ -2.31
Trim43aQ3TL54 Gm38060-201ENSMUST00000194822 464 ntBASIC0.59□□□□□ -2.31
Trim43aQ3TL54 Gm45543-201ENSMUST00000209327 88 ntBASIC0.59□□□□□ -2.31
Trim43aQ3TL54 Gm5023-201ENSMUST00000217442 587 ntBASIC0.59□□□□□ -2.31
Trim43aQ3TL54 AC162857.1-201ENSMUST00000226614 400 ntBASIC0.59□□□□□ -2.31
Trim43aQ3TL54 Gm22704-201ENSMUST00000083027 137 ntBASIC0.59□□□□□ -2.31
Trim43aQ3TL54 Sycp1-ps1-201ENSMUST00000207882 2768 ntBASIC0.58□□□□□ -2.32
Trim43aQ3TL54 Gm26135-201ENSMUST00000101993 72 ntBASIC0.58□□□□□ -2.32
Trim43aQ3TL54 Gm15379-201ENSMUST00000121224 648 ntBASIC0.58□□□□□ -2.32
Trim43aQ3TL54 Gm22482-201ENSMUST00000122563 359 ntBASIC0.58□□□□□ -2.32
Trim43aQ3TL54 Gm22215-201ENSMUST00000157558 96 ntBASIC0.58□□□□□ -2.32
Trim43aQ3TL54 Gm23783-201ENSMUST00000157941 102 ntBASIC0.58□□□□□ -2.32
Trim43aQ3TL54 Gm23022-201ENSMUST00000158768 180 ntBASIC0.58□□□□□ -2.32
Trim43aQ3TL54 Snord50b-201ENSMUST00000178497 72 ntBASIC0.58□□□□□ -2.32
Trim43aQ3TL54 Gm21060-201ENSMUST00000179346 168 ntAPPRIS P1 BASIC0.58□□□□□ -2.32
Trim43aQ3TL54 Gm28921-201ENSMUST00000190219 378 ntBASIC0.58□□□□□ -2.32
Retrieved 100 of 76,532 protein–RNA pairs in 317.7 ms