Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 AC122194.1-201ENSMUST00000220549 293 ntBASIC2.52□□□□□ -2.01
Col8a1Q00780 Vmn1r185-202ENSMUST00000226694 5656 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Col8a1Q00780 Olfr896-ps1-203ENSMUST00000216276 2921 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Col8a1Q00780 Olfr1153-202ENSMUST00000217436 2144 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Col8a1Q00780 Ifi203-201ENSMUST00000042228 3754 ntAPPRIS ALT2 TSL 1 (best) BASIC2.51□□□□□ -2.01
Col8a1Q00780 Olfr509-204ENSMUST00000215075 3418 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Col8a1Q00780 Gm14567-201ENSMUST00000117155 174 ntBASIC2.51□□□□□ -2.01
Col8a1Q00780 Gm15289-201ENSMUST00000117793 244 ntBASIC2.51□□□□□ -2.01
Col8a1Q00780 Gm14602-201ENSMUST00000118625 340 ntBASIC2.51□□□□□ -2.01
Col8a1Q00780 Gm24246-201ENSMUST00000157315 132 ntBASIC2.51□□□□□ -2.01
Col8a1Q00780 Gm22651-201ENSMUST00000157872 94 ntBASIC2.51□□□□□ -2.01
Col8a1Q00780 Gm27792-201ENSMUST00000184031 115 ntBASIC2.51□□□□□ -2.01
Col8a1Q00780 S100z-201ENSMUST00000022186 399 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
Col8a1Q00780 n-R5s176-201ENSMUST00000082683 109 ntBASIC2.51□□□□□ -2.01
Col8a1Q00780 Gm23136-201ENSMUST00000083425 99 ntBASIC2.51□□□□□ -2.01
Col8a1Q00780 Gm26168-201ENSMUST00000083787 112 ntBASIC2.51□□□□□ -2.01
Col8a1Q00780 AC117199.1-201ENSMUST00000219940 3132 ntBASIC2.51□□□□□ -2.01
Col8a1Q00780 Ifi214-203ENSMUST00000139092 2888 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
Col8a1Q00780 AC158979.1-201ENSMUST00000223594 2252 ntBASIC2.51□□□□□ -2.01
Col8a1Q00780 Olfr1216-203ENSMUST00000217000 3667 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
Col8a1Q00780 Olfr25-203ENSMUST00000214155 6479 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
Col8a1Q00780 Gm45038-201ENSMUST00000207537 3838 ntBASIC2.5□□□□□ -2.01
Col8a1Q00780 Olfr611-202ENSMUST00000216074 2301 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
Col8a1Q00780 Gm24274-201ENSMUST00000116787 124 ntBASIC2.5□□□□□ -2.01
Col8a1Q00780 Gm9009-201ENSMUST00000117321 326 ntBASIC2.5□□□□□ -2.01
Col8a1Q00780 Atp5k-ps2-201ENSMUST00000120437 210 ntBASIC2.5□□□□□ -2.01
Col8a1Q00780 Gm12013-201ENSMUST00000121971 155 ntBASIC2.5□□□□□ -2.01
Col8a1Q00780 Gm25828-201ENSMUST00000157087 95 ntBASIC2.5□□□□□ -2.01
Col8a1Q00780 Gm25866-201ENSMUST00000158245 112 ntBASIC2.5□□□□□ -2.01
Col8a1Q00780 Gm25367-201ENSMUST00000158846 106 ntBASIC2.5□□□□□ -2.01
Col8a1Q00780 Gm27672-201ENSMUST00000183751 204 ntBASIC2.5□□□□□ -2.01
Col8a1Q00780 Gm28002-201ENSMUST00000184832 100 ntBASIC2.5□□□□□ -2.01
Col8a1Q00780 Gm6801-201ENSMUST00000190697 339 ntBASIC2.5□□□□□ -2.01
Col8a1Q00780 Gm33051-201ENSMUST00000192940 274 ntTSL 5 BASIC2.5□□□□□ -2.01
Col8a1Q00780 Gm18433-202ENSMUST00000195682 196 ntBASIC2.5□□□□□ -2.01
Col8a1Q00780 Gm34314-201ENSMUST00000203622 367 ntBASIC2.5□□□□□ -2.01
Col8a1Q00780 CAAA01090905.1-201ENSMUST00000219056 426 ntTSL 2 BASIC2.5□□□□□ -2.01
Col8a1Q00780 AC154552.7-201ENSMUST00000222824 156 ntBASIC2.5□□□□□ -2.01
Col8a1Q00780 CT571266.1-201ENSMUST00000222859 153 ntBASIC2.5□□□□□ -2.01
Col8a1Q00780 AC115735.1-201ENSMUST00000226633 350 ntBASIC2.5□□□□□ -2.01
Col8a1Q00780 Gm6030-201ENSMUST00000078768 402 ntBASIC2.5□□□□□ -2.01
Col8a1Q00780 Gm23509-201ENSMUST00000083080 160 ntBASIC2.5□□□□□ -2.01
Col8a1Q00780 Gm26265-201ENSMUST00000083277 135 ntBASIC2.5□□□□□ -2.01
Col8a1Q00780 Vmn2r81-201ENSMUST00000020547 3276 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
Col8a1Q00780 Olfr652-204ENSMUST00000219111 5329 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
Col8a1Q00780 Gm44489-201ENSMUST00000104619 97 ntBASIC2.49□□□□□ -2.01
Col8a1Q00780 Gm22071-201ENSMUST00000116857 83 ntBASIC2.49□□□□□ -2.01
Col8a1Q00780 Gm16171-201ENSMUST00000118004 324 ntBASIC2.49□□□□□ -2.01
Col8a1Q00780 Gm22551-201ENSMUST00000157795 103 ntBASIC2.49□□□□□ -2.01
Col8a1Q00780 Gm26741-201ENSMUST00000180473 87 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
Col8a1Q00780 Gm6060-201ENSMUST00000188671 251 ntBASIC2.49□□□□□ -2.01
Col8a1Q00780 Gm38311-201ENSMUST00000192945 165 ntBASIC2.49□□□□□ -2.01
Col8a1Q00780 Gm36551-201ENSMUST00000196787 300 ntTSL 5 BASIC2.49□□□□□ -2.01
Col8a1Q00780 Vmn1r29-203ENSMUST00000227761 4671 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
Col8a1Q00780 Vmn1r29-205ENSMUST00000228909 4658 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
Col8a1Q00780 Mir125b-2-201ENSMUST00000083538 71 ntBASIC2.49□□□□□ -2.01
Col8a1Q00780 Gm45257-201ENSMUST00000210301 3998 ntBASIC2.49□□□□□ -2.01
Col8a1Q00780 Olfr1450-202ENSMUST00000213587 2872 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
Col8a1Q00780 Olfr1151-202ENSMUST00000217376 2866 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
Col8a1Q00780 Olfr1245-202ENSMUST00000217402 2610 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
Col8a1Q00780 Olfr726-204ENSMUST00000215105 1752 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
Col8a1Q00780 Muc16-204ENSMUST00000208663 25437 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
Col8a1Q00780 Gm42718-201ENSMUST00000197319 2681 ntBASIC2.48□□□□□ -2.01
Col8a1Q00780 Tsga10-204ENSMUST00000123082 3953 ntAPPRIS ALT2 TSL 1 (best) BASIC2.48□□□□□ -2.01
Col8a1Q00780 Vmn1r46-206ENSMUST00000228401 10955 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
Col8a1Q00780 Gm22935-201ENSMUST00000103960 104 ntBASIC2.48□□□□□ -2.01
Col8a1Q00780 Gm23128-201ENSMUST00000104257 132 ntBASIC2.48□□□□□ -2.01
Col8a1Q00780 Gm14568-201ENSMUST00000119321 294 ntBASIC2.48□□□□□ -2.01
Col8a1Q00780 Gm24896-201ENSMUST00000122741 135 ntBASIC2.48□□□□□ -2.01
Col8a1Q00780 Gm25910-201ENSMUST00000157620 140 ntBASIC2.48□□□□□ -2.01
Col8a1Q00780 Gm24075-201ENSMUST00000158175 72 ntBASIC2.48□□□□□ -2.01
Col8a1Q00780 Snord50a-201ENSMUST00000178154 72 ntBASIC2.48□□□□□ -2.01
Col8a1Q00780 Gm24463-201ENSMUST00000178417 72 ntBASIC2.48□□□□□ -2.01
Col8a1Q00780 Gm26435-201ENSMUST00000179026 107 ntBASIC2.48□□□□□ -2.01
Col8a1Q00780 Mir6386-201ENSMUST00000183558 104 ntBASIC2.48□□□□□ -2.01
Col8a1Q00780 Gm23128-202ENSMUST00000196578 133 ntBASIC2.48□□□□□ -2.01
Col8a1Q00780 AC125167.1-201ENSMUST00000198698 141 ntBASIC2.48□□□□□ -2.01
Col8a1Q00780 Gm24697-201ENSMUST00000083881 107 ntBASIC2.48□□□□□ -2.01
Col8a1Q00780 Zfp984-201ENSMUST00000105734 2729 ntAPPRIS P1 TSL 3 BASIC2.48□□□□□ -2.01
Col8a1Q00780 Olfr1448-202ENSMUST00000213177 3979 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
Col8a1Q00780 AC157570.1-201ENSMUST00000218052 3778 ntBASIC2.48□□□□□ -2.01
Col8a1Q00780 Gpr174-201ENSMUST00000101294 4614 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
Col8a1Q00780 Olfr1258-201ENSMUST00000102609 7007 ntAPPRIS P1 TSL 3 BASIC2.48□□□□□ -2.01
Col8a1Q00780 Gm42675-201ENSMUST00000197552 4035 ntBASIC2.48□□□□□ -2.01
Col8a1Q00780 Gm37320-201ENSMUST00000192781 4953 ntBASIC2.48□□□□□ -2.01
Col8a1Q00780 Olfr835-202ENSMUST00000213018 2690 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
Col8a1Q00780 Olfr1132-202ENSMUST00000216082 3260 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
Col8a1Q00780 Olfr1256-204ENSMUST00000215613 4543 ntAPPRIS P1 TSL 3 BASIC2.47□□□□□ -2.01
Col8a1Q00780 Gm11414-201ENSMUST00000121795 263 ntBASIC2.47□□□□□ -2.01
Col8a1Q00780 Gm23324-201ENSMUST00000157421 131 ntBASIC2.47□□□□□ -2.01
Col8a1Q00780 Gm25491-201ENSMUST00000158733 308 ntBASIC2.47□□□□□ -2.01
Col8a1Q00780 Gm20718-201ENSMUST00000176058 259 ntBASIC2.47□□□□□ -2.01
Col8a1Q00780 Gm27921-201ENSMUST00000183968 108 ntBASIC2.47□□□□□ -2.01
Col8a1Q00780 Gm37330-201ENSMUST00000192606 153 ntBASIC2.47□□□□□ -2.01
Col8a1Q00780 Gm42891-201ENSMUST00000199340 281 ntTSL 5 BASIC2.47□□□□□ -2.01
Col8a1Q00780 Mir3073b-201ENSMUST00000199383 60 ntBASIC2.47□□□□□ -2.01
Col8a1Q00780 AC122465.2-201ENSMUST00000221774 354 ntBASIC2.47□□□□□ -2.01
Col8a1Q00780 mt-Tv-201ENSMUST00000082389 69 ntBASIC2.47□□□□□ -2.01
Col8a1Q00780 Gm23738-201ENSMUST00000082828 171 ntBASIC2.47□□□□□ -2.01
Col8a1Q00780 Gm24977-201ENSMUST00000083106 163 ntBASIC2.47□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 99.1 ms