Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 AC125167.1-201ENSMUST00000198698 141 ntBASIC0.6□□□□□ -2.31
Shox2P70390 Gm42857-201ENSMUST00000200823 339 ntBASIC0.6□□□□□ -2.31
Shox2P70390 Gm44960-201ENSMUST00000207403 141 ntBASIC0.6□□□□□ -2.31
Shox2P70390 Gm25801-201ENSMUST00000082638 106 ntBASIC0.6□□□□□ -2.31
Shox2P70390 Gm26338-201ENSMUST00000102372 110 ntBASIC0.59□□□□□ -2.31
Shox2P70390 Gm14293-201ENSMUST00000118528 577 ntBASIC0.59□□□□□ -2.31
Shox2P70390 Gm11792-201ENSMUST00000120640 168 ntBASIC0.59□□□□□ -2.31
Shox2P70390 n-R5s188-201ENSMUST00000122646 105 ntBASIC0.59□□□□□ -2.31
Shox2P70390 Gm16546-201ENSMUST00000159442 355 ntBASIC0.59□□□□□ -2.31
Shox2P70390 Gm25750-201ENSMUST00000175483 112 ntBASIC0.59□□□□□ -2.31
Shox2P70390 Gm43220-201ENSMUST00000199299 282 ntBASIC0.59□□□□□ -2.31
Shox2P70390 Gm44734-201ENSMUST00000206025 237 ntTSL 5 BASIC0.59□□□□□ -2.31
Shox2P70390 CT485607.2-201ENSMUST00000214650 91 ntBASIC0.59□□□□□ -2.31
Shox2P70390 Gm18113-201ENSMUST00000220630 303 ntBASIC0.59□□□□□ -2.31
Shox2P70390 Gm33654-201ENSMUST00000221704 215 ntBASIC0.59□□□□□ -2.31
Shox2P70390 AC117202.2-201ENSMUST00000226491 1101 ntBASIC0.59□□□□□ -2.31
Shox2P70390 DQ267101-201ENSMUST00000082562 73 ntBASIC0.59□□□□□ -2.31
Shox2P70390 Mir695-201ENSMUST00000102261 109 ntBASIC0.58□□□□□ -2.32
Shox2P70390 Gm11794-201ENSMUST00000119446 237 ntBASIC0.58□□□□□ -2.32
Shox2P70390 Gm12433-201ENSMUST00000119659 255 ntBASIC0.58□□□□□ -2.32
Shox2P70390 Gm23169-201ENSMUST00000157157 112 ntBASIC0.58□□□□□ -2.32
Shox2P70390 Gm24747-201ENSMUST00000157835 87 ntBASIC0.58□□□□□ -2.32
Shox2P70390 Gm23036-201ENSMUST00000157885 99 ntBASIC0.58□□□□□ -2.32
Shox2P70390 Gm26430-201ENSMUST00000178054 107 ntBASIC0.58□□□□□ -2.32
Shox2P70390 Gm26914-201ENSMUST00000182262 223 ntBASIC0.58□□□□□ -2.32
Shox2P70390 Mir7077-201ENSMUST00000183991 57 ntBASIC0.58□□□□□ -2.32
Shox2P70390 Gm44325-201ENSMUST00000196757 77 ntBASIC0.58□□□□□ -2.32
Shox2P70390 Vmn1r-ps16-201ENSMUST00000204747 105 ntBASIC0.58□□□□□ -2.32
Shox2P70390 AC154636.2-201ENSMUST00000222538 161 ntBASIC0.58□□□□□ -2.32
Shox2P70390 Gm24355-201ENSMUST00000082858 122 ntBASIC0.58□□□□□ -2.32
Shox2P70390 Gm24523-201ENSMUST00000083965 132 ntBASIC0.58□□□□□ -2.32
Shox2P70390 Mir362-201ENSMUST00000093592 65 ntBASIC0.58□□□□□ -2.32
Shox2P70390 AC164297.1-201ENSMUST00000224484 1561 ntBASIC0.57□□□□□ -2.32
Shox2P70390 Gm16405-201ENSMUST00000169247 468 ntAPPRIS P1 TSL 3 BASIC0.57□□□□□ -2.32
Shox2P70390 Gm16404-201ENSMUST00000177739 468 ntBASIC0.57□□□□□ -2.32
Shox2P70390 Gm7958-201ENSMUST00000178255 468 ntBASIC0.57□□□□□ -2.32
Shox2P70390 Gm7950-201ENSMUST00000179633 468 ntBASIC0.57□□□□□ -2.32
Shox2P70390 Gm14598-201ENSMUST00000180109 468 ntBASIC0.57□□□□□ -2.32
Shox2P70390 Gm14625-201ENSMUST00000180231 468 ntBASIC0.57□□□□□ -2.32
Shox2P70390 Gm44396-201ENSMUST00000199843 114 ntBASIC0.57□□□□□ -2.32
Shox2P70390 AC124542.1-201ENSMUST00000205588 908 ntBASIC0.57□□□□□ -2.32
Shox2P70390 AC157476.1-201ENSMUST00000215555 169 ntBASIC0.57□□□□□ -2.32
Shox2P70390 AC122905.2-201ENSMUST00000220325 269 ntBASIC0.57□□□□□ -2.32
Shox2P70390 AC154472.1-201ENSMUST00000222663 236 ntTSL 3 BASIC0.57□□□□□ -2.32
Shox2P70390 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC0.57□□□□□ -2.32
Shox2P70390 AC127302.3-201ENSMUST00000215480 2791 ntBASIC0.56□□□□□ -2.32
Shox2P70390 Gm22757-201ENSMUST00000102279 96 ntBASIC0.56□□□□□ -2.32
Shox2P70390 Gm14846-201ENSMUST00000121868 216 ntBASIC0.56□□□□□ -2.32
Shox2P70390 n-R5s207-201ENSMUST00000122497 118 ntBASIC0.56□□□□□ -2.32
Shox2P70390 Gm25805-201ENSMUST00000122788 108 ntBASIC0.56□□□□□ -2.32
Shox2P70390 Gm16265-201ENSMUST00000134558 108 ntBASIC0.56□□□□□ -2.32
Shox2P70390 Mir7j-201ENSMUST00000184427 122 ntBASIC0.56□□□□□ -2.32
Shox2P70390 Gm43487-201ENSMUST00000200331 1031 ntBASIC0.56□□□□□ -2.32
Shox2P70390 Gm18213-201ENSMUST00000207850 178 ntBASIC0.56□□□□□ -2.32
Shox2P70390 Gm23097-201ENSMUST00000083448 105 ntBASIC0.56□□□□□ -2.32
Shox2P70390 Gm24258-201ENSMUST00000083739 133 ntBASIC0.56□□□□□ -2.32
Shox2P70390 AC160115.1-201ENSMUST00000224678 1574 ntBASIC0.55□□□□□ -2.32
Shox2P70390 Gm23203-201ENSMUST00000104374 107 ntBASIC0.55□□□□□ -2.32
Shox2P70390 Gm6272-201ENSMUST00000121256 171 ntBASIC0.55□□□□□ -2.32
Shox2P70390 2210418O10Rik-202ENSMUST00000135430 195 ntTSL 5 BASIC0.55□□□□□ -2.32
Shox2P70390 Gm23016-201ENSMUST00000158431 62 ntBASIC0.55□□□□□ -2.32
Shox2P70390 Gm20462-201ENSMUST00000172623 408 ntBASIC0.55□□□□□ -2.32
Shox2P70390 Gm37468-201ENSMUST00000194767 854 ntTSL 1 (best) BASIC0.55□□□□□ -2.32
Shox2P70390 Gm44055-201ENSMUST00000204376 247 ntBASIC0.55□□□□□ -2.32
Shox2P70390 Olfr454-ps1-201ENSMUST00000205206 348 ntBASIC0.55□□□□□ -2.32
Shox2P70390 Gm45119-201ENSMUST00000207612 199 ntBASIC0.55□□□□□ -2.32
Shox2P70390 Gm45688-201ENSMUST00000210002 101 ntBASIC0.55□□□□□ -2.32
Shox2P70390 Gm45402-201ENSMUST00000211796 223 ntBASIC0.55□□□□□ -2.32
Shox2P70390 Gm14392-201ENSMUST00000120332 401 ntBASIC0.54□□□□□ -2.32
Shox2P70390 Gm14413-201ENSMUST00000122158 408 ntBASIC0.54□□□□□ -2.32
Shox2P70390 Gm29640-201ENSMUST00000187972 278 ntBASIC0.54□□□□□ -2.32
Shox2P70390 Olfr1435-ps1-201ENSMUST00000207773 249 ntBASIC0.54□□□□□ -2.32
Shox2P70390 mt-Tl1-201ENSMUST00000082391 75 ntBASIC0.54□□□□□ -2.32
Shox2P70390 CT030170.3-201ENSMUST00000221205 1815 ntBASIC0.53□□□□□ -2.32
Shox2P70390 Olfr872-201ENSMUST00000086474 1897 ntAPPRIS P1 TSL 2 BASIC0.53□□□□□ -2.32
Shox2P70390 Gm22489-201ENSMUST00000116813 62 ntBASIC0.53□□□□□ -2.32
Shox2P70390 Rhox11-ps3-201ENSMUST00000121166 233 ntBASIC0.53□□□□□ -2.32
Shox2P70390 1700120G11Rik-201ENSMUST00000150273 491 ntTSL 1 (best) BASIC0.53□□□□□ -2.32
Shox2P70390 Gm23996-201ENSMUST00000158062 131 ntBASIC0.53□□□□□ -2.32
Shox2P70390 Gm22675-201ENSMUST00000158430 104 ntBASIC0.53□□□□□ -2.32
Shox2P70390 Gm25314-201ENSMUST00000178810 79 ntBASIC0.53□□□□□ -2.32
Shox2P70390 Gm23379-201ENSMUST00000180026 107 ntBASIC0.53□□□□□ -2.32
Shox2P70390 Gm28597-201ENSMUST00000187664 666 ntBASIC0.53□□□□□ -2.32
Shox2P70390 Gm29229-201ENSMUST00000188874 323 ntBASIC0.53□□□□□ -2.32
Shox2P70390 Gm44726-201ENSMUST00000203427 217 ntBASIC0.53□□□□□ -2.32
Shox2P70390 Gm25697-201ENSMUST00000082902 98 ntBASIC0.53□□□□□ -2.32
Shox2P70390 Mir19b-2-201ENSMUST00000083539 84 ntBASIC0.53□□□□□ -2.32
Shox2P70390 Gm22435-201ENSMUST00000158552 128 ntBASIC0.52□□□□□ -2.33
Shox2P70390 4930511M18Rik-201ENSMUST00000197811 679 ntTSL 1 (best) BASIC0.52□□□□□ -2.33
Shox2P70390 Mir6896-201ENSMUST00000198033 73 ntBASIC0.52□□□□□ -2.33
Shox2P70390 Gm44465-201ENSMUST00000199536 114 ntBASIC0.52□□□□□ -2.33
Shox2P70390 Gm45027-201ENSMUST00000207081 78 ntTSL 3 BASIC0.52□□□□□ -2.33
Shox2P70390 AC147101.2-201ENSMUST00000219756 184 ntBASIC0.52□□□□□ -2.33
Shox2P70390 Vmn1r230-201ENSMUST00000053974 951 ntAPPRIS P1 BASIC0.52□□□□□ -2.33
Shox2P70390 Mirlet7d-201ENSMUST00000083519 103 ntBASIC0.52□□□□□ -2.33
Shox2P70390 Mir490-201ENSMUST00000093567 84 ntBASIC0.52□□□□□ -2.33
Shox2P70390 Gm26500-201ENSMUST00000101867 106 ntBASIC0.51□□□□□ -2.33
Shox2P70390 Gm25772-201ENSMUST00000158574 56 ntBASIC0.51□□□□□ -2.33
Shox2P70390 Mir15a-201ENSMUST00000175266 84 ntBASIC0.51□□□□□ -2.33
Shox2P70390 Gm28648-201ENSMUST00000190092 343 ntBASIC0.51□□□□□ -2.33
Retrieved 100 of 76,532 protein–RNA pairs in 81.3 ms