Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 AC173345.2-201ENSMUST00000222795 153 ntBASIC-0.18□□□□□ -2.44
Cux1P53564 AC183092.1-201ENSMUST00000224301 153 ntBASIC-0.18□□□□□ -2.44
Cux1P53564 AC154424.1-201ENSMUST00000225883 799 ntBASIC-0.18□□□□□ -2.44
Cux1P53564 AC102291.2-201ENSMUST00000228083 367 ntBASIC-0.18□□□□□ -2.44
Cux1P53564 Gm24527-201ENSMUST00000082920 107 ntBASIC-0.18□□□□□ -2.44
Cux1P53564 Mir30a-201ENSMUST00000083471 71 ntBASIC-0.18□□□□□ -2.44
Cux1P53564 Mir490-201ENSMUST00000093567 84 ntBASIC-0.18□□□□□ -2.44
Cux1P53564 Gm24015-201ENSMUST00000157725 232 ntBASIC-0.18□□□□□ -2.44
Cux1P53564 Gm23024-201ENSMUST00000158770 292 ntBASIC-0.18□□□□□ -2.44
Cux1P53564 Gm23725-201ENSMUST00000177876 107 ntBASIC-0.18□□□□□ -2.44
Cux1P53564 Gm27490-201ENSMUST00000184754 128 ntBASIC-0.18□□□□□ -2.44
Cux1P53564 Gm29640-201ENSMUST00000187972 278 ntBASIC-0.18□□□□□ -2.44
Cux1P53564 Gm44010-201ENSMUST00000204432 331 ntBASIC-0.18□□□□□ -2.44
Cux1P53564 Olfr991-ps1-201ENSMUST00000215967 908 ntBASIC-0.18□□□□□ -2.44
Cux1P53564 Gm22743-201ENSMUST00000083445 133 ntBASIC-0.18□□□□□ -2.44
Cux1P53564 Olfr1094-202ENSMUST00000217509 1693 ntAPPRIS P1 TSL 5 BASIC-0.19□□□□□ -2.44
Cux1P53564 Xlr4d-ps-201ENSMUST00000118894 646 ntBASIC-0.19□□□□□ -2.44
Cux1P53564 Gm16577-201ENSMUST00000161579 471 ntTSL 3 BASIC-0.19□□□□□ -2.44
Cux1P53564 Gm28001-201ENSMUST00000183561 117 ntBASIC-0.19□□□□□ -2.44
Cux1P53564 Gm37918-201ENSMUST00000192071 120 ntBASIC-0.19□□□□□ -2.44
Cux1P53564 AC116589.7-201ENSMUST00000221061 239 ntBASIC-0.19□□□□□ -2.44
Cux1P53564 AC164117.1-201ENSMUST00000221726 239 ntBASIC-0.19□□□□□ -2.44
Cux1P53564 Gm6369-201ENSMUST00000069626 412 ntBASIC-0.19□□□□□ -2.44
Cux1P53564 Gm10801-201ENSMUST00000099684 504 ntAPPRIS P1 TSL 5 BASIC-0.19□□□□□ -2.44
Cux1P53564 4930522L14Rik-202ENSMUST00000112547 2001 ntAPPRIS P1 TSL 5 BASIC-0.2□□□□□ -2.44
Cux1P53564 Mir709-201ENSMUST00000102190 88 ntBASIC-0.2□□□□□ -2.44
Cux1P53564 Mir872-201ENSMUST00000104728 81 ntBASIC-0.2□□□□□ -2.44
Cux1P53564 Gm25309-201ENSMUST00000116728 126 ntBASIC-0.2□□□□□ -2.44
Cux1P53564 Gm12143-201ENSMUST00000119666 332 ntBASIC-0.2□□□□□ -2.44
Cux1P53564 Gm26274-201ENSMUST00000157103 321 ntBASIC-0.2□□□□□ -2.44
Cux1P53564 Gm23996-201ENSMUST00000158062 131 ntBASIC-0.2□□□□□ -2.44
Cux1P53564 Gm23898-201ENSMUST00000158111 103 ntBASIC-0.2□□□□□ -2.44
Cux1P53564 Mir3470a-201ENSMUST00000175223 77 ntBASIC-0.2□□□□□ -2.44
Cux1P53564 Gm44457-201ENSMUST00000198109 76 ntBASIC-0.2□□□□□ -2.44
Cux1P53564 Gm44990-201ENSMUST00000203922 217 ntBASIC-0.2□□□□□ -2.44
Cux1P53564 Rgs13-202ENSMUST00000111941 1545 ntAPPRIS P1 TSL 1 (best) BASIC-0.2□□□□□ -2.44
Cux1P53564 Snord89-201ENSMUST00000104516 110 ntBASIC-0.21□□□□□ -2.44
Cux1P53564 Gm15289-201ENSMUST00000117793 244 ntBASIC-0.21□□□□□ -2.44
Cux1P53564 Gm23169-201ENSMUST00000157157 112 ntBASIC-0.21□□□□□ -2.44
Cux1P53564 Scarna3a-201ENSMUST00000158911 140 ntBASIC-0.21□□□□□ -2.44
Cux1P53564 Gm29352-201ENSMUST00000188054 544 ntBASIC-0.21□□□□□ -2.44
Cux1P53564 AC117656.1-201ENSMUST00000225826 339 ntBASIC-0.21□□□□□ -2.44
Cux1P53564 Snord68-201ENSMUST00000082516 86 ntBASIC-0.21□□□□□ -2.44
Cux1P53564 Snord91a-201ENSMUST00000104305 93 ntBASIC-0.22□□□□□ -2.44
Cux1P53564 Mir654-201ENSMUST00000104787 84 ntBASIC-0.22□□□□□ -2.44
Cux1P53564 Gm22520-201ENSMUST00000158269 129 ntBASIC-0.22□□□□□ -2.44
Cux1P53564 Gm24418-201ENSMUST00000177597 79 ntBASIC-0.22□□□□□ -2.44
Cux1P53564 Gm24639-201ENSMUST00000178518 79 ntBASIC-0.22□□□□□ -2.44
Cux1P53564 Gm23076-201ENSMUST00000179082 79 ntBASIC-0.22□□□□□ -2.44
Cux1P53564 Gm25077-201ENSMUST00000179157 79 ntBASIC-0.22□□□□□ -2.44
Cux1P53564 Gm11168-204ENSMUST00000179881 672 ntAPPRIS ALT2 TSL 5 BASIC-0.22□□□□□ -2.44
Cux1P53564 Gm6105-201ENSMUST00000200580 624 ntBASIC-0.22□□□□□ -2.44
Cux1P53564 Gm24966-201ENSMUST00000082443 79 ntBASIC-0.22□□□□□ -2.44
Cux1P53564 Mir200a-201ENSMUST00000083466 90 ntBASIC-0.22□□□□□ -2.44
Cux1P53564 Gm10717-202ENSMUST00000099042 669 ntAPPRIS P5 TSL 5 BASIC-0.22□□□□□ -2.44
Cux1P53564 Gm14392-201ENSMUST00000120332 401 ntBASIC-0.23□□□□□ -2.45
Cux1P53564 Gm14413-201ENSMUST00000122158 408 ntBASIC-0.23□□□□□ -2.45
Cux1P53564 Gm22200-201ENSMUST00000158614 67 ntBASIC-0.23□□□□□ -2.45
Cux1P53564 Gm25300-201ENSMUST00000175284 84 ntBASIC-0.23□□□□□ -2.45
Cux1P53564 Gm26501-201ENSMUST00000178307 107 ntBASIC-0.23□□□□□ -2.45
Cux1P53564 BE692007-203ENSMUST00000189306 362 ntTSL 3 BASIC-0.23□□□□□ -2.45
Cux1P53564 Snora16a-202ENSMUST00000196061 137 ntBASIC-0.23□□□□□ -2.45
Cux1P53564 Gm25789-201ENSMUST00000083294 76 ntBASIC-0.23□□□□□ -2.45
Cux1P53564 Gm26066-201ENSMUST00000083385 109 ntBASIC-0.23□□□□□ -2.45
Cux1P53564 Mir574-201ENSMUST00000103854 78 ntBASIC-0.23□□□□□ -2.45
Cux1P53564 Gm16032-201ENSMUST00000118534 168 ntBASIC-0.23□□□□□ -2.45
Cux1P53564 Gm25318-201ENSMUST00000122554 314 ntBASIC-0.23□□□□□ -2.45
Cux1P53564 Obox4-ps34-201ENSMUST00000175879 520 ntBASIC-0.23□□□□□ -2.45
Cux1P53564 Gm27624-201ENSMUST00000185047 177 ntBASIC-0.23□□□□□ -2.45
Cux1P53564 Gm28256-201ENSMUST00000188953 139 ntBASIC-0.23□□□□□ -2.45
Cux1P53564 Gm28559-201ENSMUST00000190532 139 ntBASIC-0.23□□□□□ -2.45
Cux1P53564 Mir155-201ENSMUST00000083463 65 ntBASIC-0.23□□□□□ -2.45
Cux1P53564 Mirlet7g-201ENSMUST00000083506 88 ntBASIC-0.23□□□□□ -2.45
Cux1P53564 Gm26149-201ENSMUST00000157432 108 ntBASIC-0.24□□□□□ -2.45
Cux1P53564 Gm24321-201ENSMUST00000175348 80 ntBASIC-0.24□□□□□ -2.45
Cux1P53564 Gm24575-201ENSMUST00000175502 77 ntBASIC-0.24□□□□□ -2.45
Cux1P53564 Gm44455-201ENSMUST00000200061 82 ntBASIC-0.24□□□□□ -2.45
Cux1P53564 Mir142b-201ENSMUST00000083486 115 ntBASIC-0.24□□□□□ -2.45
Cux1P53564 Mir30c-2-201ENSMUST00000083633 84 ntBASIC-0.24□□□□□ -2.45
Cux1P53564 Mir487b-201ENSMUST00000102265 82 ntBASIC-0.25□□□□□ -2.45
Cux1P53564 Olfr719-ps-201ENSMUST00000137795 252 ntBASIC-0.25□□□□□ -2.45
Cux1P53564 Gm17148-201ENSMUST00000164702 249 ntBASIC-0.25□□□□□ -2.45
Cux1P53564 Gm17172-201ENSMUST00000171782 190 ntTSL 3 BASIC-0.25□□□□□ -2.45
Cux1P53564 Gm28541-201ENSMUST00000185206 442 ntTSL 5 BASIC-0.25□□□□□ -2.45
Cux1P53564 Gm28585-201ENSMUST00000187587 442 ntTSL 5 BASIC-0.25□□□□□ -2.45
Cux1P53564 Gm28811-201ENSMUST00000190650 442 ntTSL 5 BASIC-0.25□□□□□ -2.45
Cux1P53564 Gm37808-201ENSMUST00000192038 442 ntTSL 5 BASIC-0.25□□□□□ -2.45
Cux1P53564 Gm44954-201ENSMUST00000208513 227 ntBASIC-0.25□□□□□ -2.45
Cux1P53564 AC124346.1-201ENSMUST00000218539 364 ntBASIC-0.25□□□□□ -2.45
Cux1P53564 AC153141.1-201ENSMUST00000218636 501 ntBASIC-0.25□□□□□ -2.45
Cux1P53564 Gm12225-201ENSMUST00000117995 298 ntBASIC-0.26□□□□□ -2.45
Cux1P53564 Gm28992-201ENSMUST00000190534 139 ntBASIC-0.26□□□□□ -2.45
Cux1P53564 Gm42988-201ENSMUST00000198116 225 ntBASIC-0.26□□□□□ -2.45
Cux1P53564 Gm22077-201ENSMUST00000157594 93 ntBASIC-0.27□□□□□ -2.45
Cux1P53564 Gm25248-201ENSMUST00000175473 98 ntBASIC-0.27□□□□□ -2.45
Cux1P53564 Gm27817-201ENSMUST00000184302 233 ntBASIC-0.27□□□□□ -2.45
Cux1P53564 Gm37586-201ENSMUST00000193654 204 ntBASIC-0.27□□□□□ -2.45
Cux1P53564 Gm44960-201ENSMUST00000207403 141 ntBASIC-0.27□□□□□ -2.45
Cux1P53564 AC100209.2-201ENSMUST00000224461 451 ntBASIC-0.27□□□□□ -2.45
Cux1P53564 CT025689.4-201ENSMUST00000225926 601 ntBASIC-0.27□□□□□ -2.45
Retrieved 100 of 76,532 protein–RNA pairs in 89 ms