Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Gm23858-201ENSMUST00000158384 106 ntBASIC2.52□□□□□ -2.01
Shmt1P50431 Gm27399-201ENSMUST00000184250 78 ntBASIC2.52□□□□□ -2.01
Shmt1P50431 Gm28409-201ENSMUST00000187064 103 ntBASIC2.52□□□□□ -2.01
Shmt1P50431 Gm43626-201ENSMUST00000198575 162 ntBASIC2.52□□□□□ -2.01
Shmt1P50431 Gm44482-201ENSMUST00000199232 103 ntBASIC2.52□□□□□ -2.01
Shmt1P50431 Mir497-201ENSMUST00000200557 84 ntBASIC2.52□□□□□ -2.01
Shmt1P50431 Gm44052-201ENSMUST00000203382 396 ntBASIC2.52□□□□□ -2.01
Shmt1P50431 Gm45492-201ENSMUST00000211611 288 ntBASIC2.52□□□□□ -2.01
Shmt1P50431 Olfr1437-202ENSMUST00000207241 3751 ntAPPRIS P1 TSL 2 BASIC2.52□□□□□ -2.01
Shmt1P50431 Zfp988-201ENSMUST00000148762 2800 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Shmt1P50431 Olfr1309-205ENSMUST00000216948 5168 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Shmt1P50431 Traj43-201ENSMUST00000103699 57 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
Shmt1P50431 Gm24771-201ENSMUST00000158508 137 ntBASIC2.51□□□□□ -2.01
Shmt1P50431 Gm37545-201ENSMUST00000186512 148 ntBASIC2.51□□□□□ -2.01
Shmt1P50431 Gm6060-201ENSMUST00000188671 251 ntBASIC2.51□□□□□ -2.01
Shmt1P50431 Gm18546-201ENSMUST00000197245 676 ntBASIC2.51□□□□□ -2.01
Shmt1P50431 Gm44666-201ENSMUST00000208544 391 ntBASIC2.51□□□□□ -2.01
Shmt1P50431 Gm43877-201ENSMUST00000205029 2238 ntBASIC2.51□□□□□ -2.01
Shmt1P50431 AC160984.1-201ENSMUST00000225855 3154 ntBASIC2.51□□□□□ -2.01
Shmt1P50431 Gm44114-201ENSMUST00000203270 2727 ntBASIC2.51□□□□□ -2.01
Shmt1P50431 Olfr974-202ENSMUST00000213246 3561 ntAPPRIS P1 TSL 2 BASIC2.51□□□□□ -2.01
Shmt1P50431 Olfr1229-203ENSMUST00000214593 3404 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Shmt1P50431 Olfr830-202ENSMUST00000212723 3105 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
Shmt1P50431 Olfr576-201ENSMUST00000098213 3132 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Shmt1P50431 Zfp788-207ENSMUST00000170770 2499 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
Shmt1P50431 Gm13212-202ENSMUST00000105739 3595 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
Shmt1P50431 Gm25485-201ENSMUST00000104120 132 ntBASIC2.5□□□□□ -2.01
Shmt1P50431 Gm23015-201ENSMUST00000104145 128 ntBASIC2.5□□□□□ -2.01
Shmt1P50431 Snord90-201ENSMUST00000104568 111 ntBASIC2.5□□□□□ -2.01
Shmt1P50431 Gm23551-201ENSMUST00000116852 121 ntBASIC2.5□□□□□ -2.01
Shmt1P50431 Gm6954-201ENSMUST00000117416 225 ntBASIC2.5□□□□□ -2.01
Shmt1P50431 Gm22221-201ENSMUST00000157362 103 ntBASIC2.5□□□□□ -2.01
Shmt1P50431 Gm23223-201ENSMUST00000158119 127 ntBASIC2.5□□□□□ -2.01
Shmt1P50431 Gm26360-201ENSMUST00000158872 103 ntBASIC2.5□□□□□ -2.01
Shmt1P50431 Gm28912-201ENSMUST00000189001 234 ntBASIC2.5□□□□□ -2.01
Shmt1P50431 Gm21064-202ENSMUST00000190583 278 ntBASIC2.5□□□□□ -2.01
Shmt1P50431 Gm37796-201ENSMUST00000195327 134 ntBASIC2.5□□□□□ -2.01
Shmt1P50431 Gm20083-201ENSMUST00000205849 751 ntTSL 3 BASIC2.5□□□□□ -2.01
Shmt1P50431 Gm24615-201ENSMUST00000083268 113 ntBASIC2.5□□□□□ -2.01
Shmt1P50431 Mir218-1-201ENSMUST00000083669 110 ntBASIC2.5□□□□□ -2.01
Shmt1P50431 Skint6-202ENSMUST00000171224 3723 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
Shmt1P50431 AC154515.1-201ENSMUST00000226085 2841 ntBASIC2.5□□□□□ -2.01
Shmt1P50431 Gm38162-201ENSMUST00000195562 4597 ntBASIC2.49□□□□□ -2.01
Shmt1P50431 Ifi203-202ENSMUST00000081216 3610 ntAPPRIS P3 TSL 1 (best) BASIC2.49□□□□□ -2.01
Shmt1P50431 n-R5s158-201ENSMUST00000104095 118 ntBASIC2.49□□□□□ -2.01
Shmt1P50431 Gm14843-201ENSMUST00000119596 212 ntBASIC2.49□□□□□ -2.01
Shmt1P50431 Gm25980-201ENSMUST00000157176 218 ntBASIC2.49□□□□□ -2.01
Shmt1P50431 Zfp616-205ENSMUST00000178159 2964 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
Shmt1P50431 Ttn-225ENSMUST00000190813 300 ntTSL 5 BASIC2.49□□□□□ -2.01
Shmt1P50431 Mir3969-201ENSMUST00000197106 92 ntBASIC2.49□□□□□ -2.01
Shmt1P50431 Gm44477-201ENSMUST00000199661 110 ntBASIC2.49□□□□□ -2.01
Shmt1P50431 CT025689.3-201ENSMUST00000223817 301 ntBASIC2.49□□□□□ -2.01
Shmt1P50431 Olfr498-201ENSMUST00000217616 2260 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
Shmt1P50431 Mir374b-201ENSMUST00000102314 95 ntBASIC2.48□□□□□ -2.01
Shmt1P50431 Gm25938-201ENSMUST00000104139 166 ntBASIC2.48□□□□□ -2.01
Shmt1P50431 Gm22486-201ENSMUST00000116815 137 ntBASIC2.48□□□□□ -2.01
Shmt1P50431 Gm24598-201ENSMUST00000122510 74 ntBASIC2.48□□□□□ -2.01
Shmt1P50431 Gm24717-201ENSMUST00000157522 124 ntBASIC2.48□□□□□ -2.01
Shmt1P50431 Gm23080-201ENSMUST00000157846 103 ntBASIC2.48□□□□□ -2.01
Shmt1P50431 Gm22612-201ENSMUST00000158293 101 ntBASIC2.48□□□□□ -2.01
Shmt1P50431 Gm25488-201ENSMUST00000158728 118 ntBASIC2.48□□□□□ -2.01
Shmt1P50431 Gm24390-201ENSMUST00000179578 62 ntBASIC2.48□□□□□ -2.01
Shmt1P50431 Gm28647-201ENSMUST00000188416 197 ntBASIC2.48□□□□□ -2.01
Shmt1P50431 Gm37116-201ENSMUST00000195161 147 ntBASIC2.48□□□□□ -2.01
Shmt1P50431 Mir6925-201ENSMUST00000197857 70 ntBASIC2.48□□□□□ -2.01
Shmt1P50431 Gm44326-201ENSMUST00000198226 101 ntBASIC2.48□□□□□ -2.01
Shmt1P50431 Gm26456-201ENSMUST00000082831 111 ntBASIC2.48□□□□□ -2.01
Shmt1P50431 Gm25199-201ENSMUST00000083095 104 ntBASIC2.48□□□□□ -2.01
Shmt1P50431 Gm25124-201ENSMUST00000083345 164 ntBASIC2.48□□□□□ -2.01
Shmt1P50431 Gm22681-201ENSMUST00000083853 106 ntBASIC2.48□□□□□ -2.01
Shmt1P50431 Gm43706-201ENSMUST00000198767 2652 ntBASIC2.48□□□□□ -2.01
Shmt1P50431 Olfr166-203ENSMUST00000216465 4371 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
Shmt1P50431 Gm45518-201ENSMUST00000210776 2583 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
Shmt1P50431 Gm13757-202ENSMUST00000179450 4383 ntAPPRIS P1 TSL 2 BASIC2.47□□□□□ -2.01
Shmt1P50431 Gm23772-201ENSMUST00000104433 102 ntBASIC2.47□□□□□ -2.01
Shmt1P50431 Gm24937-201ENSMUST00000122597 134 ntBASIC2.47□□□□□ -2.01
Shmt1P50431 Gm23980-201ENSMUST00000157135 158 ntBASIC2.47□□□□□ -2.01
Shmt1P50431 Snord11-201ENSMUST00000158468 84 ntBASIC2.47□□□□□ -2.01
Shmt1P50431 Gm16584-201ENSMUST00000159267 189 ntBASIC2.47□□□□□ -2.01
Shmt1P50431 Gm20438-201ENSMUST00000174441 329 ntBASIC2.47□□□□□ -2.01
Shmt1P50431 Gm24510-201ENSMUST00000174965 94 ntBASIC2.47□□□□□ -2.01
Shmt1P50431 Gm29613-201ENSMUST00000185846 313 ntBASIC2.47□□□□□ -2.01
Shmt1P50431 Gm29544-201ENSMUST00000188860 313 ntBASIC2.47□□□□□ -2.01
Shmt1P50431 Gm28808-201ENSMUST00000190978 313 ntBASIC2.47□□□□□ -2.01
Shmt1P50431 Gm45456-201ENSMUST00000210841 243 ntBASIC2.47□□□□□ -2.01
Shmt1P50431 Gm24461-201ENSMUST00000082735 103 ntBASIC2.47□□□□□ -2.01
Shmt1P50431 Adgrg4-205ENSMUST00000154818 8857 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
Shmt1P50431 Tlr7-202ENSMUST00000112161 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.01
Shmt1P50431 Gm24280-201ENSMUST00000104237 134 ntBASIC2.46□□□□□ -2.02
Shmt1P50431 Gm15536-201ENSMUST00000121411 114 ntBASIC2.46□□□□□ -2.02
Shmt1P50431 Gm11192-201ENSMUST00000127017 151 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
Shmt1P50431 Trav7-6-202ENSMUST00000184687 275 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
Shmt1P50431 Gm28169-201ENSMUST00000190342 345 ntBASIC2.46□□□□□ -2.02
Shmt1P50431 Gm38364-201ENSMUST00000191814 179 ntBASIC2.46□□□□□ -2.02
Shmt1P50431 AC149294.9-201ENSMUST00000227256 164 ntBASIC2.46□□□□□ -2.02
Shmt1P50431 Gm25628-201ENSMUST00000084002 105 ntBASIC2.46□□□□□ -2.02
Shmt1P50431 Gm21876-201ENSMUST00000096511 282 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
Shmt1P50431 AC125374.3-201ENSMUST00000214983 2810 ntBASIC2.45□□□□□ -2.02
Shmt1P50431 Gm24232-201ENSMUST00000104314 132 ntBASIC2.45□□□□□ -2.02
Shmt1P50431 Gm14602-201ENSMUST00000118625 340 ntBASIC2.45□□□□□ -2.02
Retrieved 100 of 76,532 protein–RNA pairs in 142.2 ms