Protein–RNA interactions for Protein: P49135

Ercc3, General transcription and DNA repair factor IIH helicase subunit XPB, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc3P49135 Gm24440-201ENSMUST00000157236 63 ntBASIC2.15□□□□□ -2.07
Ercc3P49135 Gm27579-201ENSMUST00000158113 63 ntBASIC2.15□□□□□ -2.07
Ercc3P49135 Gm24512-201ENSMUST00000174963 65 ntBASIC2.15□□□□□ -2.07
Ercc3P49135 Gm21060-201ENSMUST00000179346 168 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
Ercc3P49135 Mir6950-201ENSMUST00000184438 73 ntBASIC2.15□□□□□ -2.07
Ercc3P49135 AC098718.2-201ENSMUST00000226822 285 ntBASIC2.15□□□□□ -2.07
Ercc3P49135 AC168062.3-201ENSMUST00000227025 165 ntBASIC2.15□□□□□ -2.07
Ercc3P49135 Vmn1r29-202ENSMUST00000226971 4714 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
Ercc3P49135 Mir767-201ENSMUST00000103256 107 ntBASIC2.14□□□□□ -2.07
Ercc3P49135 Ighv3-1-201ENSMUST00000103478 350 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
Ercc3P49135 Gm12686-201ENSMUST00000120546 397 ntBASIC2.14□□□□□ -2.07
Ercc3P49135 Gm25279-201ENSMUST00000122608 133 ntBASIC2.14□□□□□ -2.07
Ercc3P49135 Gm23536-201ENSMUST00000157541 134 ntBASIC2.14□□□□□ -2.07
Ercc3P49135 Gm23542-201ENSMUST00000158208 96 ntBASIC2.14□□□□□ -2.07
Ercc3P49135 Gm27898-201ENSMUST00000183987 80 ntBASIC2.14□□□□□ -2.07
Ercc3P49135 Mir7116-201ENSMUST00000195956 70 ntBASIC2.14□□□□□ -2.07
Ercc3P49135 Olfr1421-ps1-201ENSMUST00000208900 208 ntBASIC2.14□□□□□ -2.07
Ercc3P49135 Mir181b-2-201ENSMUST00000083644 89 ntBASIC2.14□□□□□ -2.07
Ercc3P49135 Slco6c1-201ENSMUST00000027569 2747 ntAPPRIS P2 TSL 1 (best) BASIC2.14□□□□□ -2.07
Ercc3P49135 Olfr307-202ENSMUST00000213705 4498 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
Ercc3P49135 Gm23705-201ENSMUST00000104370 130 ntBASIC2.13□□□□□ -2.07
Ercc3P49135 Gm15162-201ENSMUST00000119325 283 ntBASIC2.13□□□□□ -2.07
Ercc3P49135 Gm6025-201ENSMUST00000121517 201 ntBASIC2.13□□□□□ -2.07
Ercc3P49135 Gm23219-201ENSMUST00000158123 87 ntBASIC2.13□□□□□ -2.07
Ercc3P49135 Gm29022-201ENSMUST00000190702 225 ntBASIC2.13□□□□□ -2.07
Ercc3P49135 Gm37693-201ENSMUST00000194562 234 ntBASIC2.13□□□□□ -2.07
Ercc3P49135 AL929417.1-201ENSMUST00000214901 124 ntBASIC2.13□□□□□ -2.07
Ercc3P49135 Mir221-201ENSMUST00000083488 95 ntBASIC2.13□□□□□ -2.07
Ercc3P49135 Gm24522-201ENSMUST00000083964 108 ntBASIC2.13□□□□□ -2.07
Ercc3P49135 Ppp4r3c-ps-201ENSMUST00000151416 2445 ntBASIC2.13□□□□□ -2.07
Ercc3P49135 Skint5-202ENSMUST00000169631 4497 ntAPPRIS P5 TSL 1 (best) BASIC2.12□□□□□ -2.07
Ercc3P49135 AC161250.2-201ENSMUST00000215114 3107 ntBASIC2.12□□□□□ -2.07
Ercc3P49135 Gm26135-201ENSMUST00000101993 72 ntBASIC2.12□□□□□ -2.07
Ercc3P49135 Igkv6-13-201ENSMUST00000103395 287 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
Ercc3P49135 Gm14937-201ENSMUST00000119709 208 ntBASIC2.12□□□□□ -2.07
Ercc3P49135 Gm15611-201ENSMUST00000146928 406 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
Ercc3P49135 Snord50b-201ENSMUST00000178497 72 ntBASIC2.12□□□□□ -2.07
Ercc3P49135 Gm23141-201ENSMUST00000178682 94 ntBASIC2.12□□□□□ -2.07
Ercc3P49135 Mir6379-201ENSMUST00000183392 115 ntBASIC2.12□□□□□ -2.07
Ercc3P49135 Gm37586-201ENSMUST00000193654 204 ntBASIC2.12□□□□□ -2.07
Ercc3P49135 AC129202.1-201ENSMUST00000224895 526 ntBASIC2.12□□□□□ -2.07
Ercc3P49135 Olfr921-203ENSMUST00000217114 4120 ntAPPRIS P1 TSL 2 BASIC2.12□□□□□ -2.07
Ercc3P49135 Zfp600-201ENSMUST00000092750 4154 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
Ercc3P49135 Olfr67-201ENSMUST00000183254 3851 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
Ercc3P49135 Gm24374-201ENSMUST00000104394 106 ntBASIC2.11□□□□□ -2.07
Ercc3P49135 Gm22097-201ENSMUST00000157929 278 ntBASIC2.11□□□□□ -2.07
Ercc3P49135 Gm23002-201ENSMUST00000179221 107 ntBASIC2.11□□□□□ -2.07
Ercc3P49135 Mir6352-201ENSMUST00000184495 116 ntBASIC2.11□□□□□ -2.07
Ercc3P49135 Mir7678-201ENSMUST00000185076 71 ntBASIC2.11□□□□□ -2.07
Ercc3P49135 Gm44352-201ENSMUST00000196358 110 ntBASIC2.11□□□□□ -2.07
Ercc3P49135 Gm5010-201ENSMUST00000213131 260 ntBASIC2.11□□□□□ -2.07
Ercc3P49135 AC159896.1-201ENSMUST00000215264 215 ntBASIC2.11□□□□□ -2.07
Ercc3P49135 AC069074.1-201ENSMUST00000220048 381 ntBASIC2.11□□□□□ -2.07
Ercc3P49135 Gm24668-201ENSMUST00000158935 104 ntBASIC2.1□□□□□ -2.07
Ercc3P49135 Gm27421-201ENSMUST00000184729 167 ntBASIC2.1□□□□□ -2.07
Ercc3P49135 Gm45754-201ENSMUST00000212380 279 ntBASIC2.1□□□□□ -2.07
Ercc3P49135 AC160863.1-201ENSMUST00000218412 317 ntBASIC2.1□□□□□ -2.07
Ercc3P49135 Vmn1r78-203ENSMUST00000228664 8100 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
Ercc3P49135 Gm22556-201ENSMUST00000157803 100 ntBASIC2.09□□□□□ -2.07
Ercc3P49135 Gm26024-201ENSMUST00000158657 322 ntBASIC2.09□□□□□ -2.07
Ercc3P49135 Mir7683-201ENSMUST00000183842 61 ntBASIC2.09□□□□□ -2.07
Ercc3P49135 Gm19123-201ENSMUST00000190716 651 ntBASIC2.09□□□□□ -2.07
Ercc3P49135 Gm25820-201ENSMUST00000198589 127 ntBASIC2.09□□□□□ -2.07
Ercc3P49135 Gm44384-201ENSMUST00000200208 114 ntBASIC2.09□□□□□ -2.07
Ercc3P49135 AC132615.1-201ENSMUST00000213873 255 ntBASIC2.09□□□□□ -2.07
Ercc3P49135 AC173482.5-201ENSMUST00000224181 327 ntBASIC2.09□□□□□ -2.07
Ercc3P49135 Gm25204-201ENSMUST00000082843 106 ntBASIC2.09□□□□□ -2.07
Ercc3P49135 G2e3-203ENSMUST00000121521 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.07
Ercc3P49135 Gm23841-201ENSMUST00000116951 114 ntBASIC2.08□□□□□ -2.08
Ercc3P49135 Gm24006-201ENSMUST00000158462 132 ntBASIC2.08□□□□□ -2.08
Ercc3P49135 Gm25035-201ENSMUST00000175414 77 ntBASIC2.08□□□□□ -2.08
Ercc3P49135 Gm25730-201ENSMUST00000178753 165 ntBASIC2.08□□□□□ -2.08
Ercc3P49135 Ighv12-2-201ENSMUST00000191949 362 ntBASIC2.08□□□□□ -2.08
Ercc3P49135 AC122367.2-201ENSMUST00000220987 534 ntTSL 2 BASIC2.08□□□□□ -2.08
Ercc3P49135 CT954323.1-201ENSMUST00000222774 229 ntBASIC2.08□□□□□ -2.08
Ercc3P49135 AC126939.3-201ENSMUST00000226061 166 ntBASIC2.08□□□□□ -2.08
Ercc3P49135 Gm24042-201ENSMUST00000083114 103 ntBASIC2.08□□□□□ -2.08
Ercc3P49135 Olfr1218-204ENSMUST00000215054 3875 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
Ercc3P49135 Gm2869-201ENSMUST00000124359 2621 ntBASIC2.07□□□□□ -2.08
Ercc3P49135 Mir873a-201ENSMUST00000104863 77 ntBASIC2.07□□□□□ -2.08
Ercc3P49135 Gm10722-201ENSMUST00000151376 651 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
Ercc3P49135 Gm22603-201ENSMUST00000157603 96 ntBASIC2.07□□□□□ -2.08
Ercc3P49135 Gm23181-201ENSMUST00000158685 110 ntBASIC2.07□□□□□ -2.08
Ercc3P49135 Gm25749-201ENSMUST00000175485 111 ntBASIC2.07□□□□□ -2.08
Ercc3P49135 Gm20630-201ENSMUST00000177387 551 ntBASIC2.07□□□□□ -2.08
Ercc3P49135 Gm24656-201ENSMUST00000177548 132 ntBASIC2.07□□□□□ -2.08
Ercc3P49135 Gm24638-201ENSMUST00000179807 132 ntBASIC2.07□□□□□ -2.08
Ercc3P49135 Gm37778-201ENSMUST00000191732 190 ntBASIC2.07□□□□□ -2.08
Ercc3P49135 Gm38064-201ENSMUST00000194032 444 ntTSL 3 BASIC2.07□□□□□ -2.08
Ercc3P49135 Gm43563-201ENSMUST00000196761 198 ntBASIC2.07□□□□□ -2.08
Ercc3P49135 Mir3087-201ENSMUST00000199405 56 ntBASIC2.07□□□□□ -2.08
Ercc3P49135 Gm25357-201ENSMUST00000082745 72 ntBASIC2.07□□□□□ -2.08
Ercc3P49135 Gm25513-201ENSMUST00000083861 162 ntBASIC2.07□□□□□ -2.08
Ercc3P49135 Gm25090-201ENSMUST00000104000 132 ntBASIC2.06□□□□□ -2.08
Ercc3P49135 Gm22551-201ENSMUST00000157795 103 ntBASIC2.06□□□□□ -2.08
Ercc3P49135 Gm25051-201ENSMUST00000158602 249 ntBASIC2.06□□□□□ -2.08
Ercc3P49135 Gm2962-201ENSMUST00000159266 336 ntBASIC2.06□□□□□ -2.08
Ercc3P49135 1700016B01Rik-201ENSMUST00000197688 270 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
Ercc3P49135 8030445P17Rik-201ENSMUST00000192614 2741 ntBASIC2.06□□□□□ -2.08
Ercc3P49135 Gm12815-201ENSMUST00000121737 135 ntBASIC2.05□□□□□ -2.08
Retrieved 100 of 76,532 protein–RNA pairs in 86.2 ms