Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Gm18346-201ENSMUST00000216782 325 ntBASIC3.1□□□□□ -1.91
Rfx1P48377 AC127371.3-201ENSMUST00000228129 415 ntBASIC3.1□□□□□ -1.91
Rfx1P48377 Hmgb1l-201ENSMUST00000082150 571 ntBASIC3.1□□□□□ -1.91
Rfx1P48377 Gm23249-201ENSMUST00000083369 161 ntBASIC3.1□□□□□ -1.91
Rfx1P48377 Vmn2r65-201ENSMUST00000044583 2538 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
Rfx1P48377 Gm33962-201ENSMUST00000182643 2592 ntBASIC3.09□□□□□ -1.91
Rfx1P48377 Gm25980-201ENSMUST00000157176 218 ntBASIC3.09□□□□□ -1.91
Rfx1P48377 Gm23390-201ENSMUST00000157393 106 ntBASIC3.09□□□□□ -1.91
Rfx1P48377 Gm23113-201ENSMUST00000158477 99 ntBASIC3.09□□□□□ -1.91
Rfx1P48377 Gm37545-201ENSMUST00000186512 148 ntBASIC3.09□□□□□ -1.91
Rfx1P48377 B230207O21Rik-201ENSMUST00000198634 321 ntBASIC3.09□□□□□ -1.91
Rfx1P48377 Gm10172-201ENSMUST00000085929 558 ntBASIC3.09□□□□□ -1.91
Rfx1P48377 Rex2-201ENSMUST00000075775 3993 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.91
Rfx1P48377 Olfr1218-203ENSMUST00000215048 3900 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.92
Rfx1P48377 Gm26049-201ENSMUST00000157313 108 ntBASIC3.08□□□□□ -1.92
Rfx1P48377 Gm22141-201ENSMUST00000157403 277 ntBASIC3.08□□□□□ -1.92
Rfx1P48377 Gm23668-201ENSMUST00000157465 111 ntBASIC3.08□□□□□ -1.92
Rfx1P48377 Gm24634-201ENSMUST00000158672 107 ntBASIC3.08□□□□□ -1.92
Rfx1P48377 Gm27934-201ENSMUST00000158795 63 ntBASIC3.08□□□□□ -1.92
Rfx1P48377 Gm24333-201ENSMUST00000175101 84 ntBASIC3.08□□□□□ -1.92
Rfx1P48377 Gm27672-201ENSMUST00000183751 204 ntBASIC3.08□□□□□ -1.92
Rfx1P48377 Gm43626-201ENSMUST00000198575 162 ntBASIC3.08□□□□□ -1.92
Rfx1P48377 Trav5-2-201ENSMUST00000199855 280 ntBASIC3.08□□□□□ -1.92
Rfx1P48377 AC159885.1-201ENSMUST00000222221 199 ntBASIC3.08□□□□□ -1.92
Rfx1P48377 AC123052.1-201ENSMUST00000220604 4616 ntBASIC3.08□□□□□ -1.92
Rfx1P48377 Gm44680-201ENSMUST00000208414 2910 ntBASIC3.08□□□□□ -1.92
Rfx1P48377 Vmn1r29-203ENSMUST00000227761 4671 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
Rfx1P48377 Vmn1r29-205ENSMUST00000228909 4658 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
Rfx1P48377 AC122828.3-201ENSMUST00000223019 3915 ntBASIC3.08□□□□□ -1.92
Rfx1P48377 Igkv4-63-201ENSMUST00000103351 286 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
Rfx1P48377 Gm22384-201ENSMUST00000158187 104 ntBASIC3.07□□□□□ -1.92
Rfx1P48377 Mir1931-201ENSMUST00000158589 119 ntBASIC3.07□□□□□ -1.92
Rfx1P48377 Gm24038-201ENSMUST00000082872 159 ntBASIC3.07□□□□□ -1.92
Rfx1P48377 Gm22738-201ENSMUST00000083440 147 ntBASIC3.07□□□□□ -1.92
Rfx1P48377 Gm37928-201ENSMUST00000193265 4131 ntBASIC3.07□□□□□ -1.92
Rfx1P48377 Olfr1309-205ENSMUST00000216948 5168 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
Rfx1P48377 Gpr174-202ENSMUST00000117310 3536 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
Rfx1P48377 Gm43032-201ENSMUST00000197967 3123 ntBASIC3.06□□□□□ -1.92
Rfx1P48377 AL645643.1-201ENSMUST00000222438 3897 ntBASIC3.06□□□□□ -1.92
Rfx1P48377 Mir542-201ENSMUST00000102186 85 ntBASIC3.06□□□□□ -1.92
Rfx1P48377 Gm13246-201ENSMUST00000120994 315 ntBASIC3.06□□□□□ -1.92
Rfx1P48377 Gm24141-201ENSMUST00000122776 115 ntBASIC3.06□□□□□ -1.92
Rfx1P48377 Gm23980-201ENSMUST00000157135 158 ntBASIC3.06□□□□□ -1.92
Rfx1P48377 Gm24350-202ENSMUST00000198309 132 ntBASIC3.06□□□□□ -1.92
Rfx1P48377 F8-202ENSMUST00000114085 7295 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
Rfx1P48377 Olfr143-202ENSMUST00000213129 3449 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
Rfx1P48377 AC154386.1-201ENSMUST00000222753 2871 ntBASIC3.06□□□□□ -1.92
Rfx1P48377 Gpr174-201ENSMUST00000101294 4614 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
Rfx1P48377 U2surp-202ENSMUST00000079659 7630 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
Rfx1P48377 Gm42801-201ENSMUST00000202562 2865 ntBASIC3.05□□□□□ -1.92
Rfx1P48377 Gm24605-201ENSMUST00000104772 96 ntBASIC3.05□□□□□ -1.92
Rfx1P48377 Gm29613-201ENSMUST00000185846 313 ntBASIC3.05□□□□□ -1.92
Rfx1P48377 Gm29544-201ENSMUST00000188860 313 ntBASIC3.05□□□□□ -1.92
Rfx1P48377 Gm28808-201ENSMUST00000190978 313 ntBASIC3.05□□□□□ -1.92
Rfx1P48377 Gm43521-201ENSMUST00000197838 255 ntBASIC3.05□□□□□ -1.92
Rfx1P48377 Gm43107-201ENSMUST00000198729 255 ntBASIC3.05□□□□□ -1.92
Rfx1P48377 AC129085.1-201ENSMUST00000225263 165 ntBASIC3.05□□□□□ -1.92
Rfx1P48377 Gm23615-201ENSMUST00000082602 65 ntBASIC3.05□□□□□ -1.92
Rfx1P48377 Gm25812-201ENSMUST00000082751 103 ntBASIC3.05□□□□□ -1.92
Rfx1P48377 Gm25627-201ENSMUST00000084003 153 ntBASIC3.05□□□□□ -1.92
Rfx1P48377 Olfr1442-203ENSMUST00000208494 3593 ntAPPRIS P1 TSL 3 BASIC3.05□□□□□ -1.92
Rfx1P48377 Vmn1r76-203ENSMUST00000226947 8145 ntAPPRIS ALT2 BASIC3.05□□□□□ -1.92
Rfx1P48377 Atp11c-205ENSMUST00000154051 6039 ntTSL 5 BASIC3.04□□□□□ -1.92
Rfx1P48377 Mir92-1-201ENSMUST00000102108 80 ntBASIC3.04□□□□□ -1.92
Rfx1P48377 Gm26339-201ENSMUST00000102368 99 ntBASIC3.04□□□□□ -1.92
Rfx1P48377 Gm24171-201ENSMUST00000104126 131 ntBASIC3.04□□□□□ -1.92
Rfx1P48377 Gm14567-201ENSMUST00000117155 174 ntBASIC3.04□□□□□ -1.92
Rfx1P48377 Gm26214-201ENSMUST00000158581 107 ntBASIC3.04□□□□□ -1.92
Rfx1P48377 Gm29658-201ENSMUST00000185404 230 ntBASIC3.04□□□□□ -1.92
Rfx1P48377 Gm43381-201ENSMUST00000198553 165 ntBASIC3.04□□□□□ -1.92
Rfx1P48377 Gm44976-201ENSMUST00000205543 261 ntBASIC3.04□□□□□ -1.92
Rfx1P48377 Gm7214-201ENSMUST00000222428 272 ntBASIC3.04□□□□□ -1.92
Rfx1P48377 Snord61-201ENSMUST00000083176 71 ntBASIC3.04□□□□□ -1.92
Rfx1P48377 Mir201-201ENSMUST00000083470 66 ntBASIC3.04□□□□□ -1.92
Rfx1P48377 Zfp966-201ENSMUST00000108949 2939 ntAPPRIS P1 TSL 3 BASIC3.03□□□□□ -1.92
Rfx1P48377 Zfp729b-201ENSMUST00000012873 4835 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
Rfx1P48377 Uty-208ENSMUST00000154004 4267 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
Rfx1P48377 Olfr394-203ENSMUST00000216608 5628 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
Rfx1P48377 2210417A02Rik-201ENSMUST00000150265 550 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
Rfx1P48377 Gm22768-201ENSMUST00000158366 153 ntBASIC3.03□□□□□ -1.92
Rfx1P48377 Gm24668-201ENSMUST00000158935 104 ntBASIC3.03□□□□□ -1.92
Rfx1P48377 Olfr1442-204ENSMUST00000208657 3148 ntAPPRIS P1 TSL 3 BASIC3.02□□□□□ -1.93
Rfx1P48377 Gm23548-201ENSMUST00000158963 106 ntBASIC3.02□□□□□ -1.93
Rfx1P48377 Mir6388-201ENSMUST00000184417 75 ntBASIC3.02□□□□□ -1.93
Rfx1P48377 Gm28669-201ENSMUST00000188400 100 ntBASIC3.02□□□□□ -1.93
Rfx1P48377 AC163289.1-201ENSMUST00000215919 262 ntBASIC3.02□□□□□ -1.93
Rfx1P48377 AC124537.1-201ENSMUST00000222890 159 ntBASIC3.02□□□□□ -1.93
Rfx1P48377 Gm22306-201ENSMUST00000082692 107 ntBASIC3.02□□□□□ -1.93
Rfx1P48377 Gm25357-201ENSMUST00000082745 72 ntBASIC3.02□□□□□ -1.93
Rfx1P48377 Vmn1r76-202ENSMUST00000226300 8189 ntAPPRIS ALT2 BASIC3.02□□□□□ -1.93
Rfx1P48377 Zfp638-212ENSMUST00000203891 3968 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
Rfx1P48377 Skint6-202ENSMUST00000171224 3723 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
Rfx1P48377 Olfr339-202ENSMUST00000216645 4867 ntAPPRIS P1 TSL 3 BASIC3.01□□□□□ -1.93
Rfx1P48377 CT009504.1-201ENSMUST00000218252 3330 ntBASIC3.01□□□□□ -1.93
Rfx1P48377 Gm15069-201ENSMUST00000117792 192 ntBASIC3.01□□□□□ -1.93
Rfx1P48377 Gm15068-201ENSMUST00000119796 192 ntBASIC3.01□□□□□ -1.93
Rfx1P48377 Gm23223-201ENSMUST00000158119 127 ntBASIC3.01□□□□□ -1.93
Rfx1P48377 Gm22858-201ENSMUST00000174972 76 ntBASIC3.01□□□□□ -1.93
Rfx1P48377 Mir6353-201ENSMUST00000183596 113 ntBASIC3.01□□□□□ -1.93
Rfx1P48377 Igkv13-54-1-201ENSMUST00000196495 303 ntBASIC3.01□□□□□ -1.93
Retrieved 100 of 76,532 protein–RNA pairs in 85.9 ms