Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Gm22118-201ENSMUST00000175593 171 ntBASIC-0.9□□□□□ -2.55
HttP42859 Gm24308-201ENSMUST00000177773 114 ntBASIC-0.9□□□□□ -2.55
HttP42859 Gm29229-201ENSMUST00000188874 323 ntBASIC-0.9□□□□□ -2.55
HttP42859 Gm25559-201ENSMUST00000157182 74 ntBASIC-0.91□□□□□ -2.55
HttP42859 Gm24726-201ENSMUST00000158232 121 ntBASIC-0.91□□□□□ -2.55
HttP42859 Gm26359-201ENSMUST00000158873 101 ntBASIC-0.91□□□□□ -2.55
HttP42859 Gm14766-201ENSMUST00000121689 367 ntBASIC-0.91□□□□□ -2.56
HttP42859 Gm22805-201ENSMUST00000082739 107 ntBASIC-0.91□□□□□ -2.56
HttP42859 Gm23056-201ENSMUST00000082803 111 ntBASIC-0.91□□□□□ -2.56
HttP42859 Traj40-201ENSMUST00000103702 61 ntAPPRIS P1 BASIC-0.91□□□□□ -2.56
HttP42859 Gm11219-201ENSMUST00000118565 358 ntBASIC-0.91□□□□□ -2.56
HttP42859 Gm25600-201ENSMUST00000158357 106 ntBASIC-0.91□□□□□ -2.56
HttP42859 Gm25185-201ENSMUST00000157754 96 ntBASIC-0.92□□□□□ -2.56
HttP42859 Ranbp2-ps6-201ENSMUST00000183722 381 ntBASIC-0.92□□□□□ -2.56
HttP42859 Gm9236-201ENSMUST00000196892 587 ntBASIC-0.92□□□□□ -2.56
HttP42859 Gm34408-201ENSMUST00000222104 655 ntTSL 5 BASIC-0.92□□□□□ -2.56
HttP42859 Gm15010-201ENSMUST00000117153 407 ntBASIC-0.92□□□□□ -2.56
HttP42859 Gm23617-201ENSMUST00000175410 95 ntBASIC-0.92□□□□□ -2.56
HttP42859 Gm25457-201ENSMUST00000179509 107 ntBASIC-0.92□□□□□ -2.56
HttP42859 Gm45738-201ENSMUST00000203645 233 ntTSL 5 BASIC-0.92□□□□□ -2.56
HttP42859 Gm44811-201ENSMUST00000209120 228 ntBASIC-0.92□□□□□ -2.56
HttP42859 AC130821.1-201ENSMUST00000221997 293 ntBASIC-0.92□□□□□ -2.56
HttP42859 A530030E21Rik-201ENSMUST00000199551 1310 ntBASIC-0.92□□□□□ -2.56
HttP42859 Mir709-201ENSMUST00000102190 88 ntBASIC-0.93□□□□□ -2.56
HttP42859 Gm15529-201ENSMUST00000121833 994 ntBASIC-0.93□□□□□ -2.56
HttP42859 Mir8106-201ENSMUST00000184520 139 ntBASIC-0.93□□□□□ -2.56
HttP42859 Olfr778-ps1-201ENSMUST00000204517 207 ntBASIC-0.93□□□□□ -2.56
HttP42859 AC158981.3-202ENSMUST00000228906 523 ntBASIC-0.93□□□□□ -2.56
HttP42859 Gm22620-201ENSMUST00000082700 133 ntBASIC-0.93□□□□□ -2.56
HttP42859 Gm22005-201ENSMUST00000082795 141 ntBASIC-0.93□□□□□ -2.56
HttP42859 Gm14551-201ENSMUST00000120802 256 ntBASIC-0.93□□□□□ -2.56
HttP42859 1700014F14Rik-201ENSMUST00000199566 197 ntTSL 1 (best) BASIC-0.93□□□□□ -2.56
HttP42859 Gm43472-201ENSMUST00000200175 154 ntBASIC-0.93□□□□□ -2.56
HttP42859 Olfr1488-ps1-201ENSMUST00000207436 136 ntBASIC-0.93□□□□□ -2.56
HttP42859 Gm11856-201ENSMUST00000118712 276 ntBASIC-0.93□□□□□ -2.56
HttP42859 Gm11388-201ENSMUST00000120908 159 ntBASIC-0.93□□□□□ -2.56
HttP42859 Defa-ps12-201ENSMUST00000122353 193 ntBASIC-0.93□□□□□ -2.56
HttP42859 Gm22654-201ENSMUST00000157874 105 ntBASIC-0.93□□□□□ -2.56
HttP42859 Gm22098-201ENSMUST00000157930 85 ntBASIC-0.93□□□□□ -2.56
HttP42859 Gm22732-201ENSMUST00000158093 121 ntBASIC-0.93□□□□□ -2.56
HttP42859 Gm22430-201ENSMUST00000158546 107 ntBASIC-0.93□□□□□ -2.56
HttP42859 Gm25935-201ENSMUST00000178746 107 ntBASIC-0.93□□□□□ -2.56
HttP42859 Gm38295-201ENSMUST00000191951 151 ntBASIC-0.93□□□□□ -2.56
HttP42859 Gm37438-201ENSMUST00000192813 393 ntBASIC-0.93□□□□□ -2.56
HttP42859 Gm43955-201ENSMUST00000204332 142 ntBASIC-0.93□□□□□ -2.56
HttP42859 Mir1a-1-201ENSMUST00000093635 77 ntBASIC-0.93□□□□□ -2.56
HttP42859 AC102369.2-201ENSMUST00000219725 1679 ntBASIC-0.93□□□□□ -2.56
HttP42859 Gm13782-201ENSMUST00000149515 352 ntTSL 3 BASIC-0.94□□□□□ -2.56
HttP42859 Gm22038-201ENSMUST00000157277 242 ntBASIC-0.94□□□□□ -2.56
HttP42859 1700124M09Rik-201ENSMUST00000217047 305 ntTSL 1 (best) BASIC-0.94□□□□□ -2.56
HttP42859 Gm25627-201ENSMUST00000084003 153 ntBASIC-0.94□□□□□ -2.56
HttP42859 Gm10324-201ENSMUST00000092528 1815 ntAPPRIS P1 TSL 5 BASIC-0.94□□□□□ -2.56
HttP42859 Gm14922-201ENSMUST00000121131 163 ntBASIC-0.94□□□□□ -2.56
HttP42859 Gm24894-201ENSMUST00000122744 118 ntBASIC-0.94□□□□□ -2.56
HttP42859 Gm24884-201ENSMUST00000158784 119 ntBASIC-0.94□□□□□ -2.56
HttP42859 CT033781.2-201ENSMUST00000221113 153 ntBASIC-0.94□□□□□ -2.56
HttP42859 AC117656.1-201ENSMUST00000225826 339 ntBASIC-0.94□□□□□ -2.56
HttP42859 Gm25137-201ENSMUST00000083251 110 ntBASIC-0.94□□□□□ -2.56
HttP42859 Gm24704-201ENSMUST00000093715 107 ntBASIC-0.94□□□□□ -2.56
HttP42859 Gm37750-201ENSMUST00000193563 129 ntBASIC-0.95□□□□□ -2.56
HttP42859 Gm43367-201ENSMUST00000199986 625 ntBASIC-0.95□□□□□ -2.56
HttP42859 N4bp2os-201ENSMUST00000201547 235 ntTSL 1 (best) BASIC-0.95□□□□□ -2.56
HttP42859 AC160115.1-201ENSMUST00000224678 1574 ntBASIC-0.95□□□□□ -2.56
HttP42859 Gm23331-201ENSMUST00000157423 108 ntBASIC-0.95□□□□□ -2.56
HttP42859 Gm24853-201ENSMUST00000158026 121 ntBASIC-0.95□□□□□ -2.56
HttP42859 Gm26189-201ENSMUST00000179879 107 ntBASIC-0.95□□□□□ -2.56
HttP42859 Esp31-201ENSMUST00000174742 1308 ntAPPRIS P1 TSL 1 (best) BASIC-0.95□□□□□ -2.56
HttP42859 Gm11936-201ENSMUST00000118323 160 ntBASIC-0.95□□□□□ -2.56
HttP42859 Gm15563-201ENSMUST00000124953 410 ntTSL 3 BASIC-0.95□□□□□ -2.56
HttP42859 Gm42845-201ENSMUST00000197766 105 ntBASIC-0.95□□□□□ -2.56
HttP42859 Gm24966-201ENSMUST00000082443 79 ntBASIC-0.95□□□□□ -2.56
HttP42859 Gm27047-201ENSMUST00000183072 1819 ntBASIC-0.96□□□□□ -2.56
HttP42859 Cpxcr1-201ENSMUST00000101269 1596 ntAPPRIS P1 TSL 1 (best) BASIC-0.96□□□□□ -2.56
HttP42859 Gm23216-201ENSMUST00000179545 107 ntBASIC-0.96□□□□□ -2.56
HttP42859 Gm27993-201ENSMUST00000184362 85 ntBASIC-0.96□□□□□ -2.56
HttP42859 Mir721-201ENSMUST00000200230 88 ntBASIC-0.96□□□□□ -2.56
HttP42859 AC122335.1-201ENSMUST00000217587 175 ntBASIC-0.96□□□□□ -2.56
HttP42859 Gm25878-201ENSMUST00000104327 93 ntBASIC-0.96□□□□□ -2.56
HttP42859 Gm22541-201ENSMUST00000158165 127 ntBASIC-0.96□□□□□ -2.56
HttP42859 Gm24500-201ENSMUST00000158447 124 ntBASIC-0.96□□□□□ -2.56
HttP42859 Gm22200-201ENSMUST00000158614 67 ntBASIC-0.96□□□□□ -2.56
HttP42859 Gm17377-201ENSMUST00000165184 207 ntBASIC-0.96□□□□□ -2.56
HttP42859 Gm23805-201ENSMUST00000180129 107 ntBASIC-0.96□□□□□ -2.56
HttP42859 Gm28661-201ENSMUST00000188231 681 ntBASIC-0.96□□□□□ -2.56
HttP42859 Gm44857-201ENSMUST00000208331 196 ntBASIC-0.96□□□□□ -2.56
HttP42859 Olfr1094-202ENSMUST00000217509 1693 ntAPPRIS P1 TSL 5 BASIC-0.97□□□□□ -2.56
HttP42859 Gm12162-202ENSMUST00000129432 127 ntTSL 5 BASIC-0.97□□□□□ -2.56
HttP42859 Gm14368-201ENSMUST00000145305 415 ntBASIC-0.97□□□□□ -2.56
HttP42859 Gm26233-201ENSMUST00000175530 70 ntBASIC-0.97□□□□□ -2.56
HttP42859 Gm44391-201ENSMUST00000198490 93 ntBASIC-0.97□□□□□ -2.56
HttP42859 Gm26454-201ENSMUST00000082682 107 ntBASIC-0.97□□□□□ -2.56
HttP42859 Gm37116-201ENSMUST00000195161 147 ntBASIC-0.97□□□□□ -2.56
HttP42859 Gm19885-201ENSMUST00000212853 343 ntBASIC-0.97□□□□□ -2.56
HttP42859 AC151902.1-201ENSMUST00000227800 375 ntBASIC-0.97□□□□□ -2.56
HttP42859 Gm22145-201ENSMUST00000157396 148 ntBASIC-0.98□□□□□ -2.57
HttP42859 Gm25160-201ENSMUST00000158914 102 ntBASIC-0.98□□□□□ -2.57
HttP42859 Gm22466-201ENSMUST00000175278 69 ntBASIC-0.98□□□□□ -2.57
HttP42859 Gm29535-201ENSMUST00000185723 109 ntBASIC-0.98□□□□□ -2.57
HttP42859 Gm28143-201ENSMUST00000191082 109 ntBASIC-0.98□□□□□ -2.57
HttP42859 Gm46136-201ENSMUST00000214730 565 ntBASIC-0.98□□□□□ -2.57
Retrieved 100 of 76,532 protein–RNA pairs in 178.5 ms