Protein–RNA interactions for Protein: P40338

Vhl, von Hippel-Lindau disease tumor suppressor, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VhlP40338 Mir465b-1-201ENSMUST00000103940 79 ntBASIC0.55□□□□□ -2.32
VhlP40338 Gm22469-201ENSMUST00000104118 133 ntBASIC0.55□□□□□ -2.32
VhlP40338 Mir465b-2-201ENSMUST00000104662 79 ntBASIC0.55□□□□□ -2.32
VhlP40338 Gm11794-201ENSMUST00000119446 237 ntBASIC0.55□□□□□ -2.32
VhlP40338 Sval2-202ENSMUST00000119995 463 ntTSL 3 BASIC0.55□□□□□ -2.32
VhlP40338 Gm11792-201ENSMUST00000120640 168 ntBASIC0.55□□□□□ -2.32
VhlP40338 Rhox11-ps3-201ENSMUST00000121166 233 ntBASIC0.55□□□□□ -2.32
VhlP40338 n-R5s157-201ENSMUST00000122543 121 ntBASIC0.55□□□□□ -2.32
VhlP40338 Gm25544-201ENSMUST00000122676 120 ntBASIC0.55□□□□□ -2.32
VhlP40338 Gm13565-201ENSMUST00000133596 700 ntTSL 1 (best) BASIC0.55□□□□□ -2.32
VhlP40338 Gm11240-201ENSMUST00000142047 751 ntTSL 1 (best) BASIC0.55□□□□□ -2.32
VhlP40338 Gm22233-201ENSMUST00000157464 114 ntBASIC0.55□□□□□ -2.32
VhlP40338 Gm25868-201ENSMUST00000158253 114 ntBASIC0.55□□□□□ -2.32
VhlP40338 Gm25901-201ENSMUST00000158494 130 ntBASIC0.55□□□□□ -2.32
VhlP40338 Gm24221-201ENSMUST00000158833 313 ntBASIC0.55□□□□□ -2.32
VhlP40338 Gm16405-201ENSMUST00000169247 468 ntAPPRIS P1 TSL 3 BASIC0.55□□□□□ -2.32
VhlP40338 Vmn1r-ps31-201ENSMUST00000174112 238 ntBASIC0.55□□□□□ -2.32
VhlP40338 Obox4-ps37-201ENSMUST00000177223 276 ntBASIC0.55□□□□□ -2.32
VhlP40338 Gm7958-201ENSMUST00000178255 468 ntBASIC0.55□□□□□ -2.32
VhlP40338 Gm7950-201ENSMUST00000179633 468 ntBASIC0.55□□□□□ -2.32
VhlP40338 Gm10421-202ENSMUST00000186114 132 ntTSL 3 BASIC0.55□□□□□ -2.32
VhlP40338 Gm28661-201ENSMUST00000188231 681 ntBASIC0.55□□□□□ -2.32
VhlP40338 Gm43472-201ENSMUST00000200175 154 ntBASIC0.55□□□□□ -2.32
VhlP40338 AC110380.1-201ENSMUST00000226987 389 ntBASIC0.55□□□□□ -2.32
VhlP40338 Gm9795-201ENSMUST00000062156 693 ntBASIC0.55□□□□□ -2.32
VhlP40338 Mir32-201ENSMUST00000083610 70 ntBASIC0.55□□□□□ -2.32
VhlP40338 Gm23142-201ENSMUST00000101848 105 ntBASIC0.54□□□□□ -2.32
VhlP40338 Gm26240-201ENSMUST00000101893 105 ntBASIC0.54□□□□□ -2.32
VhlP40338 Trgj3-201ENSMUST00000103562 60 ntAPPRIS P1 BASIC0.54□□□□□ -2.32
VhlP40338 Gm15379-201ENSMUST00000121224 648 ntBASIC0.54□□□□□ -2.32
VhlP40338 Gm23542-201ENSMUST00000158208 96 ntBASIC0.54□□□□□ -2.32
VhlP40338 Snora24-201ENSMUST00000174989 130 ntBASIC0.54□□□□□ -2.32
VhlP40338 Olfr778-ps1-201ENSMUST00000204517 207 ntBASIC0.54□□□□□ -2.32
VhlP40338 Gm26135-201ENSMUST00000101993 72 ntBASIC0.53□□□□□ -2.32
VhlP40338 Gm22945-201ENSMUST00000158557 157 ntBASIC0.53□□□□□ -2.32
VhlP40338 Gm25750-201ENSMUST00000175483 112 ntBASIC0.53□□□□□ -2.32
VhlP40338 Snord50b-201ENSMUST00000178497 72 ntBASIC0.53□□□□□ -2.32
VhlP40338 Gm23148-201ENSMUST00000180367 107 ntBASIC0.53□□□□□ -2.32
VhlP40338 Gm27420-201ENSMUST00000183823 79 ntBASIC0.53□□□□□ -2.32
VhlP40338 Gm28288-201ENSMUST00000191019 214 ntBASIC0.53□□□□□ -2.32
VhlP40338 Gm28408-201ENSMUST00000191557 463 ntBASIC0.53□□□□□ -2.32
VhlP40338 Gm37713-201ENSMUST00000191746 198 ntBASIC0.53□□□□□ -2.32
VhlP40338 Gm36546-201ENSMUST00000206372 230 ntTSL 5 BASIC0.53□□□□□ -2.32
VhlP40338 AC157476.1-201ENSMUST00000215555 169 ntBASIC0.53□□□□□ -2.32
VhlP40338 AC173482.5-201ENSMUST00000224181 327 ntBASIC0.53□□□□□ -2.32
VhlP40338 Gm25851-201ENSMUST00000082794 107 ntBASIC0.53□□□□□ -2.32
VhlP40338 Gm25258-201ENSMUST00000083049 107 ntBASIC0.53□□□□□ -2.32
VhlP40338 Mir216a-201ENSMUST00000083605 72 ntBASIC0.53□□□□□ -2.32
VhlP40338 Gm26329-201ENSMUST00000093723 110 ntBASIC0.53□□□□□ -2.32
VhlP40338 Gm43877-201ENSMUST00000205029 2238 ntBASIC0.53□□□□□ -2.33
VhlP40338 Gm25416-201ENSMUST00000104221 107 ntBASIC0.52□□□□□ -2.33
VhlP40338 Gm23126-201ENSMUST00000104260 134 ntBASIC0.52□□□□□ -2.33
VhlP40338 Gm14491-201ENSMUST00000121919 199 ntBASIC0.52□□□□□ -2.33
VhlP40338 Gm14773-201ENSMUST00000125932 451 ntTSL 2 BASIC0.52□□□□□ -2.33
VhlP40338 Gm23232-201ENSMUST00000157300 105 ntBASIC0.52□□□□□ -2.33
VhlP40338 Gm22215-201ENSMUST00000157558 96 ntBASIC0.52□□□□□ -2.33
VhlP40338 Gm22598-201ENSMUST00000157600 127 ntBASIC0.52□□□□□ -2.33
VhlP40338 Gm24504-201ENSMUST00000157679 100 ntBASIC0.52□□□□□ -2.33
VhlP40338 Gm24499-201ENSMUST00000158446 104 ntBASIC0.52□□□□□ -2.33
VhlP40338 Gm24818-201ENSMUST00000175093 161 ntBASIC0.52□□□□□ -2.33
VhlP40338 Mir3471-1-201ENSMUST00000175139 131 ntBASIC0.52□□□□□ -2.33
VhlP40338 Gm21060-201ENSMUST00000179346 168 ntAPPRIS P1 BASIC0.52□□□□□ -2.33
VhlP40338 Gm29022-201ENSMUST00000190702 225 ntBASIC0.52□□□□□ -2.33
VhlP40338 Gm38050-201ENSMUST00000191904 238 ntBASIC0.52□□□□□ -2.33
VhlP40338 Gm44358-201ENSMUST00000196301 98 ntBASIC0.52□□□□□ -2.33
VhlP40338 Mir7661-201ENSMUST00000197023 61 ntBASIC0.52□□□□□ -2.33
VhlP40338 Gm40604-202ENSMUST00000219541 522 ntTSL 5 BASIC0.52□□□□□ -2.33
VhlP40338 Olfr1154-202ENSMUST00000215017 2917 ntAPPRIS P1 TSL 5 BASIC0.52□□□□□ -2.33
VhlP40338 Gm6377-201ENSMUST00000060013 2793 ntAPPRIS P1 TSL 1 (best) BASIC0.51□□□□□ -2.33
VhlP40338 Gm24283-201ENSMUST00000104233 107 ntBASIC0.51□□□□□ -2.33
VhlP40338 Gm25787-201ENSMUST00000104709 92 ntBASIC0.51□□□□□ -2.33
VhlP40338 Gm11835-201ENSMUST00000120635 663 ntBASIC0.51□□□□□ -2.33
VhlP40338 Gm14574-201ENSMUST00000120644 279 ntBASIC0.51□□□□□ -2.33
VhlP40338 Mup-ps22-201ENSMUST00000121611 243 ntBASIC0.51□□□□□ -2.33
VhlP40338 Gm23114-201ENSMUST00000158478 117 ntBASIC0.51□□□□□ -2.33
VhlP40338 Gm26914-201ENSMUST00000182262 223 ntBASIC0.51□□□□□ -2.33
VhlP40338 Gm36946-201ENSMUST00000192706 435 ntBASIC0.51□□□□□ -2.33
VhlP40338 Gm42622-201ENSMUST00000197229 355 ntBASIC0.51□□□□□ -2.33
VhlP40338 Gm44410-201ENSMUST00000203151 341 ntTSL 3 BASIC0.51□□□□□ -2.33
VhlP40338 Gm43898-201ENSMUST00000204456 424 ntBASIC0.51□□□□□ -2.33
VhlP40338 Gm45543-201ENSMUST00000209327 88 ntBASIC0.51□□□□□ -2.33
VhlP40338 Gm22884-201ENSMUST00000083127 140 ntBASIC0.51□□□□□ -2.33
VhlP40338 Gm23347-201ENSMUST00000083823 82 ntBASIC0.51□□□□□ -2.33
VhlP40338 Mir490-201ENSMUST00000093567 84 ntBASIC0.51□□□□□ -2.33
VhlP40338 Mir496a-201ENSMUST00000093627 79 ntBASIC0.51□□□□□ -2.33
VhlP40338 Gm21876-201ENSMUST00000096511 282 ntAPPRIS P1 TSL 5 BASIC0.51□□□□□ -2.33
VhlP40338 Olfr921-202ENSMUST00000213958 4012 ntAPPRIS P1 TSL 2 BASIC0.5□□□□□ -2.33
VhlP40338 Mir767-201ENSMUST00000103256 107 ntBASIC0.5□□□□□ -2.33
VhlP40338 Gm11115-201ENSMUST00000113255 54 ntAPPRIS P1 TSL 5 BASIC0.5□□□□□ -2.33
VhlP40338 Gm13518-201ENSMUST00000120018 233 ntBASIC0.5□□□□□ -2.33
VhlP40338 A130030D18Rik-201ENSMUST00000128608 654 ntTSL 1 (best) BASIC0.5□□□□□ -2.33
VhlP40338 Gm23898-201ENSMUST00000158111 103 ntBASIC0.5□□□□□ -2.33
VhlP40338 BC050972-201ENSMUST00000168475 526 ntTSL 3 BASIC0.5□□□□□ -2.33
VhlP40338 Gm26400-201ENSMUST00000175012 85 ntBASIC0.5□□□□□ -2.33
VhlP40338 Gm23921-201ENSMUST00000175258 107 ntBASIC0.5□□□□□ -2.33
VhlP40338 Mir7079-201ENSMUST00000184697 69 ntBASIC0.5□□□□□ -2.33
VhlP40338 Gm27540-201ENSMUST00000184950 187 ntBASIC0.5□□□□□ -2.33
VhlP40338 Gm19777-201ENSMUST00000191940 358 ntBASIC0.5□□□□□ -2.33
VhlP40338 Gm37997-201ENSMUST00000193515 267 ntBASIC0.5□□□□□ -2.33
VhlP40338 Gm43238-201ENSMUST00000196463 359 ntBASIC0.5□□□□□ -2.33
Retrieved 100 of 76,532 protein–RNA pairs in 84.7 ms