Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Gm29235-201ENSMUST00000185786 442 ntTSL 5 BASIC1.48□□□□□ -2.17
Traf1P39428 Gm28661-201ENSMUST00000188231 681 ntBASIC1.48□□□□□ -2.17
Traf1P39428 Gm21064-202ENSMUST00000190583 278 ntBASIC1.48□□□□□ -2.17
Traf1P39428 Gm34139-201ENSMUST00000196166 294 ntBASIC1.48□□□□□ -2.17
Traf1P39428 Gm44308-201ENSMUST00000197080 99 ntBASIC1.48□□□□□ -2.17
Traf1P39428 Gm12080-201ENSMUST00000119821 1883 ntBASIC1.48□□□□□ -2.17
Traf1P39428 Gm10945-201ENSMUST00000105596 60 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
Traf1P39428 Olfr1169-ps1-201ENSMUST00000121437 233 ntBASIC1.47□□□□□ -2.17
Traf1P39428 Mup-ps22-201ENSMUST00000121611 243 ntBASIC1.47□□□□□ -2.17
Traf1P39428 Gm15404-201ENSMUST00000141811 364 ntTSL 2 BASIC1.47□□□□□ -2.17
Traf1P39428 Gm23277-201ENSMUST00000157914 136 ntBASIC1.47□□□□□ -2.17
Traf1P39428 Gm24501-201ENSMUST00000158452 62 ntBASIC1.47□□□□□ -2.17
Traf1P39428 Gm26029-201ENSMUST00000158659 132 ntBASIC1.47□□□□□ -2.17
Traf1P39428 Gm22663-201ENSMUST00000158721 102 ntBASIC1.47□□□□□ -2.17
Traf1P39428 Gm17196-201ENSMUST00000164074 345 ntTSL 5 BASIC1.47□□□□□ -2.17
Traf1P39428 Gm38074-201ENSMUST00000193467 145 ntTSL 5 BASIC1.47□□□□□ -2.17
Traf1P39428 Gm43884-201ENSMUST00000204251 559 ntBASIC1.47□□□□□ -2.17
Traf1P39428 AC132437.1-201ENSMUST00000218308 320 ntBASIC1.47□□□□□ -2.17
Traf1P39428 Gm25204-201ENSMUST00000082843 106 ntBASIC1.47□□□□□ -2.17
Traf1P39428 Gm14491-201ENSMUST00000121919 199 ntBASIC1.46□□□□□ -2.18
Traf1P39428 Gm23329-201ENSMUST00000157415 108 ntBASIC1.46□□□□□ -2.18
Traf1P39428 Gm23339-201ENSMUST00000158962 139 ntBASIC1.46□□□□□ -2.18
Traf1P39428 Gm27640-201ENSMUST00000184580 147 ntBASIC1.46□□□□□ -2.18
Traf1P39428 AC166341.3-201ENSMUST00000221861 114 ntBASIC1.46□□□□□ -2.18
Traf1P39428 Gm25793-201ENSMUST00000083287 107 ntBASIC1.46□□□□□ -2.18
Traf1P39428 Gm24494-201ENSMUST00000083804 81 ntBASIC1.46□□□□□ -2.18
Traf1P39428 Gm23492-201ENSMUST00000116837 115 ntBASIC1.45□□□□□ -2.18
Traf1P39428 Gm15327-202ENSMUST00000153958 467 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
Traf1P39428 Gm23024-201ENSMUST00000158770 292 ntBASIC1.45□□□□□ -2.18
Traf1P39428 Gm24154-201ENSMUST00000175261 130 ntBASIC1.45□□□□□ -2.18
Traf1P39428 Mir5104-201ENSMUST00000175319 94 ntBASIC1.45□□□□□ -2.18
Traf1P39428 Gm16399-201ENSMUST00000181423 219 ntBASIC1.45□□□□□ -2.18
Traf1P39428 Gm29512-201ENSMUST00000185544 315 ntBASIC1.45□□□□□ -2.18
Traf1P39428 Gm28418-201ENSMUST00000186179 423 ntBASIC1.45□□□□□ -2.18
Traf1P39428 Gm28849-201ENSMUST00000188127 174 ntBASIC1.45□□□□□ -2.18
Traf1P39428 Gm28330-201ENSMUST00000190353 171 ntBASIC1.45□□□□□ -2.18
Traf1P39428 Gm43505-201ENSMUST00000200579 139 ntBASIC1.45□□□□□ -2.18
Traf1P39428 Gm29818-201ENSMUST00000218070 165 ntBASIC1.45□□□□□ -2.18
Traf1P39428 Gm24042-201ENSMUST00000083114 103 ntBASIC1.45□□□□□ -2.18
Traf1P39428 Olfr820-203ENSMUST00000215791 3956 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
Traf1P39428 Gm22785-201ENSMUST00000104087 132 ntBASIC1.44□□□□□ -2.18
Traf1P39428 n-R5s188-201ENSMUST00000122646 105 ntBASIC1.44□□□□□ -2.18
Traf1P39428 Mir3471-1-201ENSMUST00000175139 131 ntBASIC1.44□□□□□ -2.18
Traf1P39428 Gm22929-201ENSMUST00000175517 107 ntBASIC1.44□□□□□ -2.18
Traf1P39428 Mir5624-201ENSMUST00000176635 61 ntBASIC1.44□□□□□ -2.18
Traf1P39428 Gm27997-201ENSMUST00000184942 69 ntBASIC1.44□□□□□ -2.18
Traf1P39428 Gm9251-201ENSMUST00000197202 628 ntBASIC1.44□□□□□ -2.18
Traf1P39428 Gm42774-201ENSMUST00000198854 283 ntBASIC1.44□□□□□ -2.18
Traf1P39428 Gm43406-201ENSMUST00000200356 334 ntBASIC1.44□□□□□ -2.18
Traf1P39428 Olfr454-ps1-201ENSMUST00000205206 348 ntBASIC1.44□□□□□ -2.18
Traf1P39428 AC157476.1-201ENSMUST00000215555 169 ntBASIC1.44□□□□□ -2.18
Traf1P39428 CU062626.2-201ENSMUST00000223953 274 ntBASIC1.44□□□□□ -2.18
Traf1P39428 AC154328.1-201ENSMUST00000225875 307 ntBASIC1.44□□□□□ -2.18
Traf1P39428 Gm22248-201ENSMUST00000082482 150 ntBASIC1.44□□□□□ -2.18
Traf1P39428 Gm22306-201ENSMUST00000082692 107 ntBASIC1.44□□□□□ -2.18
Traf1P39428 CT030170.3-201ENSMUST00000221205 1815 ntBASIC1.44□□□□□ -2.18
Traf1P39428 Gm23705-201ENSMUST00000104370 130 ntBASIC1.43□□□□□ -2.18
Traf1P39428 Vmn1r-ps125-201ENSMUST00000117767 290 ntBASIC1.43□□□□□ -2.18
Traf1P39428 Gm22228-201ENSMUST00000157364 101 ntBASIC1.43□□□□□ -2.18
Traf1P39428 Mir3061-201ENSMUST00000175129 91 ntBASIC1.43□□□□□ -2.18
Traf1P39428 Gm44352-201ENSMUST00000196358 110 ntBASIC1.43□□□□□ -2.18
Traf1P39428 Gm44325-201ENSMUST00000196757 77 ntBASIC1.43□□□□□ -2.18
Traf1P39428 Gm23845-201ENSMUST00000083834 152 ntBASIC1.43□□□□□ -2.18
Traf1P39428 Mir1951-201ENSMUST00000157981 89 ntBASIC1.42□□□□□ -2.18
Traf1P39428 Gm22836-201ENSMUST00000158441 61 ntBASIC1.42□□□□□ -2.18
Traf1P39428 Selenok-ps4-201ENSMUST00000178835 277 ntBASIC1.42□□□□□ -2.18
Traf1P39428 Gm29665-201ENSMUST00000191457 528 ntBASIC1.42□□□□□ -2.18
Traf1P39428 AC122242.1-201ENSMUST00000224650 304 ntBASIC1.42□□□□□ -2.18
Traf1P39428 Mucl1-202ENSMUST00000226484 758 ntAPPRIS P5 BASIC1.42□□□□□ -2.18
Traf1P39428 AC098718.2-201ENSMUST00000226822 285 ntBASIC1.42□□□□□ -2.18
Traf1P39428 AC115735.2-201ENSMUST00000227135 351 ntBASIC1.42□□□□□ -2.18
Traf1P39428 Gm24316-201ENSMUST00000083041 107 ntBASIC1.42□□□□□ -2.18
Traf1P39428 mt-Nd4-201ENSMUST00000082414 1378 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
Traf1P39428 Olfr832-202ENSMUST00000218385 4435 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
Traf1P39428 Gm14923-201ENSMUST00000118270 155 ntBASIC1.41□□□□□ -2.18
Traf1P39428 Gm22477-201ENSMUST00000122569 316 ntBASIC1.41□□□□□ -2.18
Traf1P39428 Gm26022-201ENSMUST00000158663 108 ntBASIC1.41□□□□□ -2.18
Traf1P39428 Gm23419-201ENSMUST00000175523 84 ntBASIC1.41□□□□□ -2.18
Traf1P39428 Gm26968-201ENSMUST00000182894 481 ntBASIC1.41□□□□□ -2.18
Traf1P39428 Mir7063-201ENSMUST00000184158 91 ntBASIC1.41□□□□□ -2.18
Traf1P39428 Mir7059-201ENSMUST00000184825 59 ntBASIC1.41□□□□□ -2.18
Traf1P39428 Gm29107-201ENSMUST00000190910 347 ntBASIC1.41□□□□□ -2.18
Traf1P39428 AC164612.2-202ENSMUST00000216314 253 ntBASIC1.41□□□□□ -2.18
Traf1P39428 Gm24765-201ENSMUST00000083691 103 ntBASIC1.41□□□□□ -2.18
Traf1P39428 Gm24865-201ENSMUST00000103246 96 ntBASIC1.4□□□□□ -2.19
Traf1P39428 Ighv1-47-201ENSMUST00000103518 294 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
Traf1P39428 Gm22545-201ENSMUST00000104350 132 ntBASIC1.4□□□□□ -2.19
Traf1P39428 Gm10722-201ENSMUST00000151376 651 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.19
Traf1P39428 Gm22403-201ENSMUST00000174919 84 ntBASIC1.4□□□□□ -2.19
Traf1P39428 Gm23636-201ENSMUST00000175070 95 ntBASIC1.4□□□□□ -2.19
Traf1P39428 Mir7091-201ENSMUST00000184075 79 ntBASIC1.4□□□□□ -2.19
Traf1P39428 Gm44858-201ENSMUST00000207360 154 ntBASIC1.4□□□□□ -2.19
Traf1P39428 Olfr515-ps1-201ENSMUST00000208389 189 ntBASIC1.4□□□□□ -2.19
Traf1P39428 Zfp969-202ENSMUST00000131041 252 ntTSL 2 BASIC1.39□□□□□ -2.19
Traf1P39428 Gm25663-201ENSMUST00000157698 135 ntBASIC1.39□□□□□ -2.19
Traf1P39428 Mir3968-201ENSMUST00000175355 100 ntBASIC1.39□□□□□ -2.19
Traf1P39428 Gm28881-201ENSMUST00000187710 470 ntTSL 3 BASIC1.39□□□□□ -2.19
Traf1P39428 Gm42891-201ENSMUST00000199340 281 ntTSL 5 BASIC1.39□□□□□ -2.19
Traf1P39428 Gm25409-201ENSMUST00000083764 131 ntBASIC1.39□□□□□ -2.19
Traf1P39428 BC022960-201ENSMUST00000119987 1815 ntBASIC1.38□□□□□ -2.19
Retrieved 100 of 76,532 protein–RNA pairs in 113.7 ms