Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Gm43406-201ENSMUST00000200356 334 ntBASIC1.17□□□□□ -2.22
Cd40lgP27548 AC098718.2-201ENSMUST00000226822 285 ntBASIC1.17□□□□□ -2.22
Cd40lgP27548 AC158981.3-202ENSMUST00000228906 523 ntBASIC1.17□□□□□ -2.22
Cd40lgP27548 Gm10092-201ENSMUST00000077110 180 ntBASIC1.17□□□□□ -2.22
Cd40lgP27548 Gm24038-201ENSMUST00000082872 159 ntBASIC1.17□□□□□ -2.22
Cd40lgP27548 Gm25512-201ENSMUST00000083863 107 ntBASIC1.17□□□□□ -2.22
Cd40lgP27548 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
Cd40lgP27548 Mir343-201ENSMUST00000102360 75 ntBASIC1.16□□□□□ -2.22
Cd40lgP27548 Gm23492-201ENSMUST00000116837 115 ntBASIC1.16□□□□□ -2.22
Cd40lgP27548 Gm14491-201ENSMUST00000121919 199 ntBASIC1.16□□□□□ -2.22
Cd40lgP27548 Gm24915-201ENSMUST00000157288 78 ntBASIC1.16□□□□□ -2.22
Cd40lgP27548 Gm23083-201ENSMUST00000157851 116 ntBASIC1.16□□□□□ -2.22
Cd40lgP27548 Mir6951-201ENSMUST00000183910 75 ntBASIC1.16□□□□□ -2.22
Cd40lgP27548 Gm38064-201ENSMUST00000194032 444 ntTSL 3 BASIC1.16□□□□□ -2.22
Cd40lgP27548 AC139186.1-201ENSMUST00000197610 94 ntBASIC1.16□□□□□ -2.22
Cd40lgP27548 AC173482.5-201ENSMUST00000224181 327 ntBASIC1.16□□□□□ -2.22
Cd40lgP27548 AC098718.1-201ENSMUST00000226166 175 ntBASIC1.16□□□□□ -2.22
Cd40lgP27548 Gm24865-201ENSMUST00000103246 96 ntBASIC1.15□□□□□ -2.23
Cd40lgP27548 Gm11794-201ENSMUST00000119446 237 ntBASIC1.15□□□□□ -2.23
Cd40lgP27548 Gm13725-201ENSMUST00000122139 207 ntBASIC1.15□□□□□ -2.23
Cd40lgP27548 Gm22228-201ENSMUST00000157364 101 ntBASIC1.15□□□□□ -2.23
Cd40lgP27548 Gm22434-201ENSMUST00000158549 122 ntBASIC1.15□□□□□ -2.23
Cd40lgP27548 Mir6240-201ENSMUST00000184281 117 ntBASIC1.15□□□□□ -2.23
Cd40lgP27548 Gm44028-201ENSMUST00000205205 355 ntTSL 5 BASIC1.15□□□□□ -2.23
Cd40lgP27548 CU062626.2-201ENSMUST00000223953 274 ntBASIC1.15□□□□□ -2.23
Cd40lgP27548 Gm24316-201ENSMUST00000083041 107 ntBASIC1.15□□□□□ -2.23
Cd40lgP27548 Vmn1r75-204ENSMUST00000227611 4336 ntAPPRIS ALT2 BASIC1.15□□□□□ -2.23
Cd40lgP27548 AC164629.4-201ENSMUST00000218505 3247 ntBASIC1.15□□□□□ -2.23
Cd40lgP27548 BC022960-201ENSMUST00000119987 1815 ntBASIC1.15□□□□□ -2.23
Cd40lgP27548 Mir1904-201ENSMUST00000122702 80 ntBASIC1.14□□□□□ -2.23
Cd40lgP27548 Gm24440-201ENSMUST00000157236 63 ntBASIC1.14□□□□□ -2.23
Cd40lgP27548 Gm27723-201ENSMUST00000157398 63 ntBASIC1.14□□□□□ -2.23
Cd40lgP27548 Gm25884-201ENSMUST00000157782 62 ntBASIC1.14□□□□□ -2.23
Cd40lgP27548 Gm24512-201ENSMUST00000174963 65 ntBASIC1.14□□□□□ -2.23
Cd40lgP27548 Gm22242-201ENSMUST00000175224 118 ntBASIC1.14□□□□□ -2.23
Cd40lgP27548 Gm27894-201ENSMUST00000184177 92 ntBASIC1.14□□□□□ -2.23
Cd40lgP27548 Mir7675-201ENSMUST00000184262 58 ntBASIC1.14□□□□□ -2.23
Cd40lgP27548 Gm28409-201ENSMUST00000187064 103 ntBASIC1.14□□□□□ -2.23
Cd40lgP27548 Gm28661-201ENSMUST00000188231 681 ntBASIC1.14□□□□□ -2.23
Cd40lgP27548 Gm42719-201ENSMUST00000197393 355 ntBASIC1.14□□□□□ -2.23
Cd40lgP27548 Mir7227-201ENSMUST00000200408 59 ntBASIC1.14□□□□□ -2.23
Cd40lgP27548 AC115735.2-201ENSMUST00000227135 351 ntBASIC1.14□□□□□ -2.23
Cd40lgP27548 Gm24261-201ENSMUST00000083744 104 ntBASIC1.14□□□□□ -2.23
Cd40lgP27548 8030445P17Rik-201ENSMUST00000192614 2741 ntBASIC1.14□□□□□ -2.23
Cd40lgP27548 Gm13231-201ENSMUST00000119218 2850 ntBASIC1.14□□□□□ -2.23
Cd40lgP27548 Vmn1r75-207ENSMUST00000228646 4466 ntAPPRIS ALT2 BASIC1.13□□□□□ -2.23
Cd40lgP27548 Gm10945-201ENSMUST00000105596 60 ntAPPRIS P1 TSL 5 BASIC1.13□□□□□ -2.23
Cd40lgP27548 Zfp969-202ENSMUST00000131041 252 ntTSL 2 BASIC1.13□□□□□ -2.23
Cd40lgP27548 Gm26363-201ENSMUST00000158866 83 ntBASIC1.13□□□□□ -2.23
Cd40lgP27548 Gm17196-201ENSMUST00000164074 345 ntTSL 5 BASIC1.13□□□□□ -2.23
Cd40lgP27548 Mir8116-201ENSMUST00000184134 97 ntBASIC1.13□□□□□ -2.23
Cd40lgP27548 Gm28579-201ENSMUST00000186143 369 ntBASIC1.13□□□□□ -2.23
Cd40lgP27548 Gm34015-201ENSMUST00000194908 451 ntBASIC1.13□□□□□ -2.23
Cd40lgP27548 Gm45005-201ENSMUST00000206640 157 ntBASIC1.13□□□□□ -2.23
Cd40lgP27548 Gm14917-201ENSMUST00000118872 2105 ntBASIC1.13□□□□□ -2.23
Cd40lgP27548 Olfr1222-203ENSMUST00000215816 3796 ntAPPRIS P1 TSL 5 BASIC1.12□□□□□ -2.23
Cd40lgP27548 Olfr820-203ENSMUST00000215791 3956 ntAPPRIS P1 TSL 5 BASIC1.12□□□□□ -2.23
Cd40lgP27548 Gm22780-201ENSMUST00000104084 132 ntBASIC1.12□□□□□ -2.23
Cd40lgP27548 Gm25509-201ENSMUST00000116985 106 ntBASIC1.12□□□□□ -2.23
Cd40lgP27548 Mup-ps22-201ENSMUST00000121611 243 ntBASIC1.12□□□□□ -2.23
Cd40lgP27548 Gm12924-201ENSMUST00000121747 318 ntBASIC1.12□□□□□ -2.23
Cd40lgP27548 Gm24724-201ENSMUST00000158230 107 ntBASIC1.12□□□□□ -2.23
Cd40lgP27548 Gm22074-201ENSMUST00000158595 113 ntBASIC1.12□□□□□ -2.23
Cd40lgP27548 Gm26022-201ENSMUST00000158663 108 ntBASIC1.12□□□□□ -2.23
Cd40lgP27548 Gm24154-201ENSMUST00000175261 130 ntBASIC1.12□□□□□ -2.23
Cd40lgP27548 Mir3968-201ENSMUST00000175355 100 ntBASIC1.12□□□□□ -2.23
Cd40lgP27548 Gm22448-201ENSMUST00000179254 107 ntBASIC1.12□□□□□ -2.23
Cd40lgP27548 Mir7091-201ENSMUST00000184075 79 ntBASIC1.12□□□□□ -2.23
Cd40lgP27548 Mir7059-201ENSMUST00000184825 59 ntBASIC1.12□□□□□ -2.23
Cd40lgP27548 Gm19777-201ENSMUST00000191940 358 ntBASIC1.12□□□□□ -2.23
Cd40lgP27548 Gm44352-201ENSMUST00000196358 110 ntBASIC1.12□□□□□ -2.23
Cd40lgP27548 Gm42891-201ENSMUST00000199340 281 ntTSL 5 BASIC1.12□□□□□ -2.23
Cd40lgP27548 Olfr515-ps1-201ENSMUST00000208389 189 ntBASIC1.12□□□□□ -2.23
Cd40lgP27548 Sva-201ENSMUST00000024059 651 ntAPPRIS P2 TSL 1 (best) BASIC1.12□□□□□ -2.23
Cd40lgP27548 Gm23406-201ENSMUST00000082537 122 ntBASIC1.12□□□□□ -2.23
Cd40lgP27548 Gm25204-201ENSMUST00000082843 106 ntBASIC1.12□□□□□ -2.23
Cd40lgP27548 Rps24-ps2-201ENSMUST00000091375 395 ntBASIC1.12□□□□□ -2.23
Cd40lgP27548 Gm44177-201ENSMUST00000204338 2667 ntBASIC1.11□□□□□ -2.23
Cd40lgP27548 Mir669d-2-201ENSMUST00000116854 86 ntBASIC1.11□□□□□ -2.23
Cd40lgP27548 Gm15379-201ENSMUST00000121224 648 ntBASIC1.11□□□□□ -2.23
Cd40lgP27548 Gm15213-201ENSMUST00000122098 216 ntBASIC1.11□□□□□ -2.23
Cd40lgP27548 Gm15214-201ENSMUST00000122155 470 ntBASIC1.11□□□□□ -2.23
Cd40lgP27548 Gm15391-201ENSMUST00000147509 257 ntTSL 3 BASIC1.11□□□□□ -2.23
Cd40lgP27548 Gm23329-201ENSMUST00000157415 108 ntBASIC1.11□□□□□ -2.23
Cd40lgP27548 Mir1951-201ENSMUST00000157981 89 ntBASIC1.11□□□□□ -2.23
Cd40lgP27548 Gm16399-201ENSMUST00000181423 219 ntBASIC1.11□□□□□ -2.23
Cd40lgP27548 Gm45673-201ENSMUST00000210293 358 ntBASIC1.11□□□□□ -2.23
Cd40lgP27548 Gm22248-201ENSMUST00000082482 150 ntBASIC1.11□□□□□ -2.23
Cd40lgP27548 Gm23345-201ENSMUST00000083817 150 ntBASIC1.11□□□□□ -2.23
Cd40lgP27548 Gm23941-201ENSMUST00000101953 107 ntBASIC1.1□□□□□ -2.23
Cd40lgP27548 Gm15327-202ENSMUST00000153958 467 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
Cd40lgP27548 Gm23982-201ENSMUST00000157141 106 ntBASIC1.1□□□□□ -2.23
Cd40lgP27548 Gm22321-201ENSMUST00000157152 104 ntBASIC1.1□□□□□ -2.23
Cd40lgP27548 Gm22129-201ENSMUST00000179034 107 ntBASIC1.1□□□□□ -2.23
Cd40lgP27548 Gm29014-201ENSMUST00000191422 326 ntBASIC1.1□□□□□ -2.23
Cd40lgP27548 Gm42594-201ENSMUST00000199511 246 ntBASIC1.1□□□□□ -2.23
Cd40lgP27548 Gm43199-201ENSMUST00000200019 307 ntBASIC1.1□□□□□ -2.23
Cd40lgP27548 Olfr454-ps1-201ENSMUST00000205206 348 ntBASIC1.1□□□□□ -2.23
Cd40lgP27548 Gm45616-201ENSMUST00000211711 319 ntBASIC1.1□□□□□ -2.23
Cd40lgP27548 Olfr1108-ps1-201ENSMUST00000216930 121 ntBASIC1.1□□□□□ -2.23
Retrieved 100 of 76,532 protein–RNA pairs in 84.3 ms