Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 AC162857.1-201ENSMUST00000226614 400 ntBASIC0.99□□□□□ -2.25
Lire1P11260 Gm25697-201ENSMUST00000082902 98 ntBASIC0.99□□□□□ -2.25
Lire1P11260 Gm25506-201ENSMUST00000104339 70 ntBASIC0.98□□□□□ -2.25
Lire1P11260 Gm11042-201ENSMUST00000110441 120 ntAPPRIS P1 TSL 5 BASIC0.98□□□□□ -2.25
Lire1P11260 Gm23542-201ENSMUST00000158208 96 ntBASIC0.98□□□□□ -2.25
Lire1P11260 Gm20386-201ENSMUST00000174010 132 ntBASIC0.98□□□□□ -2.25
Lire1P11260 Gm27410-201ENSMUST00000183851 115 ntBASIC0.98□□□□□ -2.25
Lire1P11260 Gm29490-201ENSMUST00000190923 342 ntBASIC0.98□□□□□ -2.25
Lire1P11260 Gm45027-201ENSMUST00000207081 78 ntTSL 3 BASIC0.98□□□□□ -2.25
Lire1P11260 4930598N05Rik-207ENSMUST00000208997 83 ntTSL 5 BASIC0.98□□□□□ -2.25
Lire1P11260 Gm24311-201ENSMUST00000082570 104 ntBASIC0.98□□□□□ -2.25
Lire1P11260 Mir10b-201ENSMUST00000083566 68 ntBASIC0.98□□□□□ -2.25
Lire1P11260 Arhgap5-204ENSMUST00000219443 9323 ntAPPRIS P1 TSL 5 BASIC0.98□□□□□ -2.25
Lire1P11260 Gm26135-201ENSMUST00000101993 72 ntBASIC0.97□□□□□ -2.25
Lire1P11260 Sval2-202ENSMUST00000119995 463 ntTSL 3 BASIC0.97□□□□□ -2.25
Lire1P11260 Snord50b-201ENSMUST00000178497 72 ntBASIC0.97□□□□□ -2.25
Lire1P11260 Gm27540-201ENSMUST00000184950 187 ntBASIC0.97□□□□□ -2.25
Lire1P11260 Gm44396-201ENSMUST00000199843 114 ntBASIC0.97□□□□□ -2.25
Lire1P11260 Mir219a-2-201ENSMUST00000083551 97 ntBASIC0.97□□□□□ -2.25
Lire1P11260 Mir324-201ENSMUST00000083600 89 ntBASIC0.97□□□□□ -2.25
Lire1P11260 Gm16032-201ENSMUST00000118534 168 ntBASIC0.96□□□□□ -2.26
Lire1P11260 Gm11794-201ENSMUST00000119446 237 ntBASIC0.96□□□□□ -2.26
Lire1P11260 Gm34302-201ENSMUST00000192926 243 ntAPPRIS P1 TSL 5 BASIC0.96□□□□□ -2.26
Lire1P11260 Gm25627-201ENSMUST00000084003 153 ntBASIC0.96□□□□□ -2.26
Lire1P11260 Olfr867-203ENSMUST00000216538 4617 ntAPPRIS P1 TSL 5 BASIC0.95□□□□□ -2.26
Lire1P11260 Gm24810-201ENSMUST00000175317 70 ntBASIC0.95□□□□□ -2.26
Lire1P11260 Gm21060-201ENSMUST00000179346 168 ntAPPRIS P1 BASIC0.95□□□□□ -2.26
Lire1P11260 Mir7663-201ENSMUST00000183950 61 ntBASIC0.95□□□□□ -2.26
Lire1P11260 Gm43367-201ENSMUST00000199986 625 ntBASIC0.95□□□□□ -2.26
Lire1P11260 Sycp1-ps1-201ENSMUST00000207882 2768 ntBASIC0.95□□□□□ -2.26
Lire1P11260 Gm24116-201ENSMUST00000103975 107 ntBASIC0.94□□□□□ -2.26
Lire1P11260 Mir6381-201ENSMUST00000183426 87 ntBASIC0.94□□□□□ -2.26
Lire1P11260 Mir6380-201ENSMUST00000184334 81 ntBASIC0.94□□□□□ -2.26
Lire1P11260 Gm29229-201ENSMUST00000188874 323 ntBASIC0.94□□□□□ -2.26
Lire1P11260 Gm44326-201ENSMUST00000198226 101 ntBASIC0.94□□□□□ -2.26
Lire1P11260 Gm44811-201ENSMUST00000209120 228 ntBASIC0.94□□□□□ -2.26
Lire1P11260 Snord32a-201ENSMUST00000083285 83 ntBASIC0.94□□□□□ -2.26
Lire1P11260 Gm22294-201ENSMUST00000083308 104 ntBASIC0.94□□□□□ -2.26
Lire1P11260 AC164297.1-201ENSMUST00000224484 1561 ntBASIC0.93□□□□□ -2.26
Lire1P11260 Traj13-201ENSMUST00000103728 57 ntAPPRIS P1 BASIC0.93□□□□□ -2.26
Lire1P11260 Gm27419-201ENSMUST00000184576 109 ntBASIC0.93□□□□□ -2.26
Lire1P11260 Gm28921-201ENSMUST00000190219 378 ntBASIC0.93□□□□□ -2.26
Lire1P11260 Gm38323-201ENSMUST00000192450 210 ntBASIC0.93□□□□□ -2.26
Lire1P11260 Gm38113-201ENSMUST00000193704 201 ntBASIC0.93□□□□□ -2.26
Lire1P11260 Mir19b-2-201ENSMUST00000083539 84 ntBASIC0.93□□□□□ -2.26
Lire1P11260 Mir34a-201ENSMUST00000083559 102 ntBASIC0.93□□□□□ -2.26
Lire1P11260 Mir362-201ENSMUST00000093592 65 ntBASIC0.93□□□□□ -2.26
Lire1P11260 AC158598.2-201ENSMUST00000213397 3832 ntBASIC0.93□□□□□ -2.26
Lire1P11260 Gm26338-201ENSMUST00000102372 110 ntBASIC0.92□□□□□ -2.26
Lire1P11260 Mir767-201ENSMUST00000103256 107 ntBASIC0.92□□□□□ -2.26
Lire1P11260 Gm25496-201ENSMUST00000104430 120 ntBASIC0.92□□□□□ -2.26
Lire1P11260 Gm11835-201ENSMUST00000120635 663 ntBASIC0.92□□□□□ -2.26
Lire1P11260 Gm23232-201ENSMUST00000157300 105 ntBASIC0.92□□□□□ -2.26
Lire1P11260 Gm37337-201ENSMUST00000192601 993 ntBASIC0.92□□□□□ -2.26
Lire1P11260 Olfr778-ps1-201ENSMUST00000204517 207 ntBASIC0.92□□□□□ -2.26
Lire1P11260 Mir496a-201ENSMUST00000093627 79 ntBASIC0.92□□□□□ -2.26
Lire1P11260 Gm14568-201ENSMUST00000119321 294 ntBASIC0.91□□□□□ -2.26
Lire1P11260 AC110380.1-201ENSMUST00000226987 389 ntBASIC0.91□□□□□ -2.26
Lire1P11260 Gm26056-201ENSMUST00000083043 104 ntBASIC0.91□□□□□ -2.26
Lire1P11260 Mir33-201ENSMUST00000083531 69 ntBASIC0.91□□□□□ -2.26
Lire1P11260 Mir490-201ENSMUST00000093567 84 ntBASIC0.91□□□□□ -2.26
Lire1P11260 Olfr1100-202ENSMUST00000117211 2937 ntAPPRIS P1 TSL 5 BASIC0.9□□□□□ -2.26
Lire1P11260 Gm22469-201ENSMUST00000104118 133 ntBASIC0.9□□□□□ -2.27
Lire1P11260 Gm24283-201ENSMUST00000104233 107 ntBASIC0.9□□□□□ -2.27
Lire1P11260 Gm23130-201ENSMUST00000104252 74 ntBASIC0.9□□□□□ -2.27
Lire1P11260 Gm23203-201ENSMUST00000104374 107 ntBASIC0.9□□□□□ -2.27
Lire1P11260 Gm11115-201ENSMUST00000113255 54 ntAPPRIS P1 TSL 5 BASIC0.9□□□□□ -2.27
Lire1P11260 Rhox11-ps3-201ENSMUST00000121166 233 ntBASIC0.9□□□□□ -2.27
Lire1P11260 Gm14491-201ENSMUST00000121919 199 ntBASIC0.9□□□□□ -2.27
Lire1P11260 Gm43250-201ENSMUST00000196536 273 ntBASIC0.9□□□□□ -2.27
Lire1P11260 Gm43472-201ENSMUST00000200175 154 ntBASIC0.9□□□□□ -2.27
Lire1P11260 Gm18213-201ENSMUST00000207850 178 ntBASIC0.9□□□□□ -2.27
Lire1P11260 Olfr1064-ps1-201ENSMUST00000213670 600 ntBASIC0.9□□□□□ -2.27
Lire1P11260 Gm40604-202ENSMUST00000219541 522 ntTSL 5 BASIC0.9□□□□□ -2.27
Lire1P11260 AC124182.1-201ENSMUST00000227091 321 ntBASIC0.9□□□□□ -2.27
Lire1P11260 Mir27b-201ENSMUST00000083541 73 ntBASIC0.9□□□□□ -2.27
Lire1P11260 Mir22-201ENSMUST00000083595 95 ntBASIC0.9□□□□□ -2.27
Lire1P11260 Gm23347-201ENSMUST00000083823 82 ntBASIC0.9□□□□□ -2.27
Lire1P11260 Mir695-201ENSMUST00000102261 109 ntBASIC0.89□□□□□ -2.27
Lire1P11260 Gm22215-201ENSMUST00000157558 96 ntBASIC0.89□□□□□ -2.27
Lire1P11260 4930511M18Rik-201ENSMUST00000197811 679 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
Lire1P11260 CT485607.2-201ENSMUST00000214650 91 ntBASIC0.89□□□□□ -2.27
Lire1P11260 Gm21897-201ENSMUST00000178312 1500 ntAPPRIS P1 BASIC0.89□□□□□ -2.27
Lire1P11260 Gm15379-201ENSMUST00000121224 648 ntBASIC0.88□□□□□ -2.27
Lire1P11260 Mup-ps22-201ENSMUST00000121611 243 ntBASIC0.88□□□□□ -2.27
Lire1P11260 Gm25825-201ENSMUST00000157091 124 ntBASIC0.88□□□□□ -2.27
Lire1P11260 Gm22791-201ENSMUST00000157232 145 ntBASIC0.88□□□□□ -2.27
Lire1P11260 Gm26400-201ENSMUST00000175012 85 ntBASIC0.88□□□□□ -2.27
Lire1P11260 Gm22914-201ENSMUST00000175195 77 ntBASIC0.88□□□□□ -2.27
Lire1P11260 Gm25284-201ENSMUST00000180345 141 ntBASIC0.88□□□□□ -2.27
Lire1P11260 Gm25079-201ENSMUST00000082529 203 ntBASIC0.88□□□□□ -2.27
Lire1P11260 Gm26329-201ENSMUST00000093723 110 ntBASIC0.88□□□□□ -2.27
Lire1P11260 Gm25773-201ENSMUST00000116718 127 ntBASIC0.87□□□□□ -2.27
Lire1P11260 Gm10772-201ENSMUST00000167981 255 ntAPPRIS P1 BASIC0.87□□□□□ -2.27
Lire1P11260 Gm16405-201ENSMUST00000169247 468 ntAPPRIS P1 TSL 3 BASIC0.87□□□□□ -2.27
Lire1P11260 Obox4-ps37-201ENSMUST00000177223 276 ntBASIC0.87□□□□□ -2.27
Lire1P11260 Gm7958-201ENSMUST00000178255 468 ntBASIC0.87□□□□□ -2.27
Lire1P11260 Gm21954-201ENSMUST00000179544 51 ntAPPRIS P1 TSL 5 BASIC0.87□□□□□ -2.27
Lire1P11260 Gm7950-201ENSMUST00000179633 468 ntBASIC0.87□□□□□ -2.27
Lire1P11260 Gm10105-201ENSMUST00000184601 270 ntBASIC0.87□□□□□ -2.27
Retrieved 100 of 76,532 protein–RNA pairs in 106.6 ms