Protein–RNA interactions for Protein: P08121

Col3a1, Collagen alpha-1(III) chain, mousemouse

Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1P08121 Gm27326-201ENSMUST00000183504 95 ntBASIC2.11□□□□□ -2.07
Col3a1P08121 Gm29167-201ENSMUST00000190024 377 ntBASIC2.11□□□□□ -2.07
Col3a1P08121 Gm18433-201ENSMUST00000192747 197 ntBASIC2.11□□□□□ -2.07
Col3a1P08121 AC117232.1-201ENSMUST00000197964 119 ntBASIC2.11□□□□□ -2.07
Col3a1P08121 Gm18982-201ENSMUST00000198118 529 ntBASIC2.11□□□□□ -2.07
Col3a1P08121 Gm26054-201ENSMUST00000083037 107 ntBASIC2.11□□□□□ -2.07
Col3a1P08121 Gm24492-201ENSMUST00000083798 107 ntBASIC2.11□□□□□ -2.07
Col3a1P08121 Vmn1r178-202ENSMUST00000226450 2880 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
Col3a1P08121 Gm22149-201ENSMUST00000104442 136 ntBASIC2.1□□□□□ -2.07
Col3a1P08121 Gm23320-201ENSMUST00000104462 127 ntBASIC2.1□□□□□ -2.07
Col3a1P08121 Gm11334-201ENSMUST00000121969 156 ntBASIC2.1□□□□□ -2.07
Col3a1P08121 Mir21b-201ENSMUST00000184317 108 ntBASIC2.1□□□□□ -2.07
Col3a1P08121 Gm27520-201ENSMUST00000184872 81 ntBASIC2.1□□□□□ -2.07
Col3a1P08121 AL772271.1-201ENSMUST00000196848 65 ntBASIC2.1□□□□□ -2.07
Col3a1P08121 Snora19-201ENSMUST00000082962 132 ntBASIC2.1□□□□□ -2.07
Col3a1P08121 Gm23658-201ENSMUST00000083233 132 ntBASIC2.1□□□□□ -2.07
Col3a1P08121 Snord14d-201ENSMUST00000083424 86 ntBASIC2.1□□□□□ -2.07
Col3a1P08121 Gm24163-201ENSMUST00000093660 132 ntBASIC2.1□□□□□ -2.07
Col3a1P08121 Olfr896-ps1-203ENSMUST00000216276 2921 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
Col3a1P08121 Mir669b-201ENSMUST00000102172 97 ntBASIC2.09□□□□□ -2.07
Col3a1P08121 Gm22148-201ENSMUST00000104445 107 ntBASIC2.09□□□□□ -2.07
Col3a1P08121 Mir1298-201ENSMUST00000116681 98 ntBASIC2.09□□□□□ -2.07
Col3a1P08121 Gm13922-201ENSMUST00000119505 156 ntBASIC2.09□□□□□ -2.07
Col3a1P08121 Gm22225-201ENSMUST00000157358 278 ntBASIC2.09□□□□□ -2.07
Col3a1P08121 Gm24054-201ENSMUST00000158619 105 ntBASIC2.09□□□□□ -2.07
Col3a1P08121 Gm26157-201ENSMUST00000158974 126 ntBASIC2.09□□□□□ -2.07
Col3a1P08121 Gm27271-201ENSMUST00000183509 170 ntBASIC2.09□□□□□ -2.07
Col3a1P08121 Gm29308-201ENSMUST00000188863 315 ntBASIC2.09□□□□□ -2.07
Col3a1P08121 Gm28537-201ENSMUST00000189026 315 ntBASIC2.09□□□□□ -2.07
Col3a1P08121 Gm29631-201ENSMUST00000191065 315 ntBASIC2.09□□□□□ -2.07
Col3a1P08121 Gm43563-201ENSMUST00000196761 198 ntBASIC2.09□□□□□ -2.07
Col3a1P08121 Gm23370-202ENSMUST00000197008 129 ntBASIC2.09□□□□□ -2.07
Col3a1P08121 Gm44338-201ENSMUST00000198614 110 ntBASIC2.09□□□□□ -2.07
Col3a1P08121 Gm43680-201ENSMUST00000199466 340 ntBASIC2.09□□□□□ -2.07
Col3a1P08121 Gm37061-201ENSMUST00000195066 3243 ntBASIC2.09□□□□□ -2.07
Col3a1P08121 Arhgap5-201ENSMUST00000110725 5197 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
Col3a1P08121 Gm2869-201ENSMUST00000124359 2621 ntBASIC2.09□□□□□ -2.07
Col3a1P08121 Gm25089-201ENSMUST00000102015 79 ntBASIC2.08□□□□□ -2.08
Col3a1P08121 Traj43-201ENSMUST00000103699 57 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
Col3a1P08121 Gm22373-201ENSMUST00000104584 89 ntBASIC2.08□□□□□ -2.08
Col3a1P08121 Gm12934-201ENSMUST00000119221 343 ntBASIC2.08□□□□□ -2.08
Col3a1P08121 Gm25945-201ENSMUST00000122484 135 ntBASIC2.08□□□□□ -2.08
Col3a1P08121 Gm24716-201ENSMUST00000157524 104 ntBASIC2.08□□□□□ -2.08
Col3a1P08121 Gm25840-201ENSMUST00000177821 79 ntBASIC2.08□□□□□ -2.08
Col3a1P08121 Gm24952-201ENSMUST00000177909 79 ntBASIC2.08□□□□□ -2.08
Col3a1P08121 Gm23682-201ENSMUST00000178146 79 ntBASIC2.08□□□□□ -2.08
Col3a1P08121 Gm24652-201ENSMUST00000178223 79 ntBASIC2.08□□□□□ -2.08
Col3a1P08121 Gm22629-201ENSMUST00000178272 79 ntBASIC2.08□□□□□ -2.08
Col3a1P08121 Gm24021-201ENSMUST00000178435 79 ntBASIC2.08□□□□□ -2.08
Col3a1P08121 Gm22274-201ENSMUST00000178441 79 ntBASIC2.08□□□□□ -2.08
Col3a1P08121 Gm22050-201ENSMUST00000178442 79 ntBASIC2.08□□□□□ -2.08
Col3a1P08121 Gm23688-201ENSMUST00000178502 79 ntBASIC2.08□□□□□ -2.08
Col3a1P08121 Gm23944-201ENSMUST00000178607 79 ntBASIC2.08□□□□□ -2.08
Col3a1P08121 Gm26283-201ENSMUST00000178625 79 ntBASIC2.08□□□□□ -2.08
Col3a1P08121 Gm25452-201ENSMUST00000178776 79 ntBASIC2.08□□□□□ -2.08
Col3a1P08121 Gm23286-201ENSMUST00000178963 79 ntBASIC2.08□□□□□ -2.08
Col3a1P08121 Gm22640-201ENSMUST00000179035 79 ntBASIC2.08□□□□□ -2.08
Col3a1P08121 Gm25984-201ENSMUST00000179129 79 ntBASIC2.08□□□□□ -2.08
Col3a1P08121 Gm25585-201ENSMUST00000179469 79 ntBASIC2.08□□□□□ -2.08
Col3a1P08121 Gm26374-201ENSMUST00000179737 79 ntBASIC2.08□□□□□ -2.08
Col3a1P08121 Gm24040-201ENSMUST00000179786 79 ntBASIC2.08□□□□□ -2.08
Col3a1P08121 Gm25017-201ENSMUST00000179805 79 ntBASIC2.08□□□□□ -2.08
Col3a1P08121 Gm23618-201ENSMUST00000179912 79 ntBASIC2.08□□□□□ -2.08
Col3a1P08121 Gm26284-201ENSMUST00000180107 79 ntBASIC2.08□□□□□ -2.08
Col3a1P08121 Gm24570-201ENSMUST00000180314 79 ntBASIC2.08□□□□□ -2.08
Col3a1P08121 Gm24654-201ENSMUST00000180315 79 ntBASIC2.08□□□□□ -2.08
Col3a1P08121 Gm8739-201ENSMUST00000185962 181 ntTSL 5 BASIC2.08□□□□□ -2.08
Col3a1P08121 Gm33866-201ENSMUST00000196911 289 ntBASIC2.08□□□□□ -2.08
Col3a1P08121 Igkv1-136-201ENSMUST00000200635 297 ntBASIC2.08□□□□□ -2.08
Col3a1P08121 Gm44429-201ENSMUST00000203542 186 ntBASIC2.08□□□□□ -2.08
Col3a1P08121 Trgj3-201ENSMUST00000103562 60 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
Col3a1P08121 Gm24234-201ENSMUST00000104316 107 ntBASIC2.07□□□□□ -2.08
Col3a1P08121 Gm14215-201ENSMUST00000120578 221 ntBASIC2.07□□□□□ -2.08
Col3a1P08121 Gm23260-201ENSMUST00000158317 172 ntBASIC2.07□□□□□ -2.08
Col3a1P08121 Gm25267-201ENSMUST00000158522 63 ntBASIC2.07□□□□□ -2.08
Col3a1P08121 Gm23337-201ENSMUST00000158959 118 ntBASIC2.07□□□□□ -2.08
Col3a1P08121 Gm22775-201ENSMUST00000177630 120 ntBASIC2.07□□□□□ -2.08
Col3a1P08121 Gm23569-201ENSMUST00000180120 120 ntBASIC2.07□□□□□ -2.08
Col3a1P08121 Gm17067-202ENSMUST00000180131 123 ntBASIC2.07□□□□□ -2.08
Col3a1P08121 Gm5269-201ENSMUST00000183590 138 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
Col3a1P08121 Gm8508-201ENSMUST00000061226 363 ntBASIC2.07□□□□□ -2.08
Col3a1P08121 Mir767-201ENSMUST00000103256 107 ntBASIC2.07□□□□□ -2.08
Col3a1P08121 Gm12449-201ENSMUST00000117572 234 ntBASIC2.07□□□□□ -2.08
Col3a1P08121 Gm23886-201ENSMUST00000122684 313 ntBASIC2.07□□□□□ -2.08
Col3a1P08121 Gm22557-201ENSMUST00000157804 102 ntBASIC2.07□□□□□ -2.08
Col3a1P08121 Gm24959-201ENSMUST00000157924 146 ntBASIC2.07□□□□□ -2.08
Col3a1P08121 Gm22967-201ENSMUST00000157956 239 ntBASIC2.07□□□□□ -2.08
Col3a1P08121 Gm25831-201ENSMUST00000158924 163 ntBASIC2.07□□□□□ -2.08
Col3a1P08121 Gm16004-201ENSMUST00000161981 311 ntTSL 5 BASIC2.07□□□□□ -2.08
Col3a1P08121 Ighv1-78-201ENSMUST00000163670 294 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
Col3a1P08121 Gm17113-201ENSMUST00000170118 171 ntBASIC2.07□□□□□ -2.08
Col3a1P08121 Mir7039-201ENSMUST00000183852 85 ntBASIC2.07□□□□□ -2.08
Col3a1P08121 Gm27894-201ENSMUST00000184177 92 ntBASIC2.07□□□□□ -2.08
Col3a1P08121 Gm28434-201ENSMUST00000187738 500 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
Col3a1P08121 Gm28650-201ENSMUST00000188413 411 ntBASIC2.07□□□□□ -2.08
Col3a1P08121 Gm37281-201ENSMUST00000192412 439 ntBASIC2.07□□□□□ -2.08
Col3a1P08121 Gm45116-201ENSMUST00000207392 275 ntBASIC2.07□□□□□ -2.08
Col3a1P08121 Gm44555-201ENSMUST00000209008 148 ntBASIC2.07□□□□□ -2.08
Col3a1P08121 Gm24453-201ENSMUST00000083346 76 ntBASIC2.07□□□□□ -2.08
Col3a1P08121 Vmn1r178-205ENSMUST00000227993 2518 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
Retrieved 100 of 76,532 protein–RNA pairs in 137.5 ms