Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Gm44488-201ENSMUST00000199467 119 ntBASIC0.25□□□□□ -2.37
CopeO89079 Olfr1035-ps1-202ENSMUST00000213364 288 ntTSL 5 BASIC0.25□□□□□ -2.37
CopeO89079 AC167192.2-201ENSMUST00000224794 198 ntBASIC0.25□□□□□ -2.37
CopeO89079 2210407C18Rik-201ENSMUST00000048801 876 ntAPPRIS P1 TSL 1 (best) BASIC0.25□□□□□ -2.37
CopeO89079 Mir448-201ENSMUST00000083516 112 ntBASIC0.25□□□□□ -2.37
CopeO89079 Gm20939-201ENSMUST00000108007 1572 ntAPPRIS P1 TSL 5 BASIC0.24□□□□□ -2.37
CopeO89079 Gm22786-201ENSMUST00000104086 122 ntBASIC0.24□□□□□ -2.37
CopeO89079 Gm11248-201ENSMUST00000119568 201 ntBASIC0.24□□□□□ -2.37
CopeO89079 Gm24630-201ENSMUST00000122768 106 ntBASIC0.24□□□□□ -2.37
CopeO89079 Gm25825-201ENSMUST00000157091 124 ntBASIC0.24□□□□□ -2.37
CopeO89079 Gm22983-201ENSMUST00000158308 104 ntBASIC0.24□□□□□ -2.37
CopeO89079 AC153541.1-201ENSMUST00000213786 294 ntBASIC0.24□□□□□ -2.37
CopeO89079 Mir410-201ENSMUST00000083563 81 ntBASIC0.24□□□□□ -2.37
CopeO89079 Gm26164-201ENSMUST00000083793 104 ntBASIC0.24□□□□□ -2.37
CopeO89079 Gm382-201ENSMUST00000096332 4070 ntAPPRIS P1 TSL 1 (best) BASIC0.23□□□□□ -2.37
CopeO89079 Trgj3-201ENSMUST00000103562 60 ntAPPRIS P1 BASIC0.23□□□□□ -2.37
CopeO89079 Gm25109-201ENSMUST00000122474 114 ntBASIC0.23□□□□□ -2.37
CopeO89079 Gm26424-201ENSMUST00000122530 104 ntBASIC0.23□□□□□ -2.37
CopeO89079 Gm24963-201ENSMUST00000157916 144 ntBASIC0.23□□□□□ -2.37
CopeO89079 Gm25949-201ENSMUST00000175333 114 ntBASIC0.23□□□□□ -2.37
CopeO89079 Gm28256-201ENSMUST00000188953 139 ntBASIC0.23□□□□□ -2.37
CopeO89079 Gm28559-201ENSMUST00000190532 139 ntBASIC0.23□□□□□ -2.37
CopeO89079 Gm42988-201ENSMUST00000198116 225 ntBASIC0.23□□□□□ -2.37
CopeO89079 AC122905.2-201ENSMUST00000220325 269 ntBASIC0.23□□□□□ -2.37
CopeO89079 AC129208.2-201ENSMUST00000228506 320 ntBASIC0.23□□□□□ -2.37
CopeO89079 Gm22673-201ENSMUST00000104415 131 ntBASIC0.22□□□□□ -2.37
CopeO89079 Gm11407-201ENSMUST00000120362 1058 ntBASIC0.22□□□□□ -2.37
CopeO89079 Gm14761-201ENSMUST00000121363 262 ntBASIC0.22□□□□□ -2.37
CopeO89079 Gm22200-201ENSMUST00000158614 67 ntBASIC0.22□□□□□ -2.37
CopeO89079 AC104832.1-201ENSMUST00000222938 550 ntBASIC0.22□□□□□ -2.37
CopeO89079 AC154747.1-201ENSMUST00000225265 239 ntBASIC0.22□□□□□ -2.37
CopeO89079 Gm24283-201ENSMUST00000104233 107 ntBASIC0.21□□□□□ -2.38
CopeO89079 Mir880-201ENSMUST00000104809 78 ntBASIC0.21□□□□□ -2.38
CopeO89079 Gm11798-201ENSMUST00000119150 421 ntBASIC0.21□□□□□ -2.38
CopeO89079 Gm11392-201ENSMUST00000181419 710 ntBASIC0.21□□□□□ -2.38
CopeO89079 Gm28217-201ENSMUST00000188613 648 ntTSL 5 BASIC0.21□□□□□ -2.38
CopeO89079 Gm42506-201ENSMUST00000202009 150 ntBASIC0.21□□□□□ -2.38
CopeO89079 AC165092.3-201ENSMUST00000223602 282 ntBASIC0.21□□□□□ -2.38
CopeO89079 AC132918.1-201ENSMUST00000227877 925 ntBASIC0.21□□□□□ -2.38
CopeO89079 Mir10b-201ENSMUST00000083566 68 ntBASIC0.21□□□□□ -2.38
CopeO89079 Gm26135-201ENSMUST00000101993 72 ntBASIC0.2□□□□□ -2.38
CopeO89079 Gm25170-201ENSMUST00000104191 129 ntBASIC0.2□□□□□ -2.38
CopeO89079 Gm23321-201ENSMUST00000104465 126 ntBASIC0.2□□□□□ -2.38
CopeO89079 Gm25838-201ENSMUST00000158920 120 ntBASIC0.2□□□□□ -2.38
CopeO89079 Gm16539-201ENSMUST00000160086 327 ntBASIC0.2□□□□□ -2.38
CopeO89079 BC050972-201ENSMUST00000168475 526 ntTSL 3 BASIC0.2□□□□□ -2.38
CopeO89079 Gm20462-201ENSMUST00000172623 408 ntBASIC0.2□□□□□ -2.38
CopeO89079 Snord50b-201ENSMUST00000178497 72 ntBASIC0.2□□□□□ -2.38
CopeO89079 Gm25314-201ENSMUST00000178810 79 ntBASIC0.2□□□□□ -2.38
CopeO89079 Gm21060-201ENSMUST00000179346 168 ntAPPRIS P1 BASIC0.2□□□□□ -2.38
CopeO89079 Gm27717-201ENSMUST00000183933 151 ntBASIC0.2□□□□□ -2.38
CopeO89079 4930511M18Rik-201ENSMUST00000197811 679 ntTSL 1 (best) BASIC0.2□□□□□ -2.38
CopeO89079 Olfr375-ps1-201ENSMUST00000198131 249 ntBASIC0.2□□□□□ -2.38
CopeO89079 Gm44211-201ENSMUST00000204867 145 ntBASIC0.2□□□□□ -2.38
CopeO89079 Gm45402-201ENSMUST00000211796 223 ntBASIC0.2□□□□□ -2.38
CopeO89079 Mir500-201ENSMUST00000093600 92 ntBASIC0.2□□□□□ -2.38
CopeO89079 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC0.19□□□□□ -2.38
CopeO89079 Trbv17-201ENSMUST00000103275 374 ntAPPRIS P1 BASIC0.19□□□□□ -2.38
CopeO89079 Snord89-201ENSMUST00000104516 110 ntBASIC0.19□□□□□ -2.38
CopeO89079 Gm14536-201ENSMUST00000118324 138 ntBASIC0.19□□□□□ -2.38
CopeO89079 Gm15027-201ENSMUST00000120922 138 ntBASIC0.19□□□□□ -2.38
CopeO89079 Gm22435-201ENSMUST00000158552 128 ntBASIC0.19□□□□□ -2.38
CopeO89079 Gm23008-201ENSMUST00000158946 80 ntBASIC0.19□□□□□ -2.38
CopeO89079 4930579O11Rik-202ENSMUST00000168243 672 ntTSL 3 BASIC0.19□□□□□ -2.38
CopeO89079 Gm27475-201ENSMUST00000183420 61 ntBASIC0.19□□□□□ -2.38
CopeO89079 Mir7065-201ENSMUST00000185110 61 ntBASIC0.19□□□□□ -2.38
CopeO89079 Gm29640-201ENSMUST00000187972 278 ntBASIC0.19□□□□□ -2.38
CopeO89079 Gm45543-201ENSMUST00000209327 88 ntBASIC0.19□□□□□ -2.38
CopeO89079 Gm45541-201ENSMUST00000210443 54 ntBASIC0.19□□□□□ -2.38
CopeO89079 Gm25855-201ENSMUST00000082787 72 ntBASIC0.19□□□□□ -2.38
CopeO89079 Gm11386-201ENSMUST00000117761 347 ntBASIC0.18□□□□□ -2.38
CopeO89079 Gm25559-201ENSMUST00000157182 74 ntBASIC0.18□□□□□ -2.38
CopeO89079 Gm23232-201ENSMUST00000157300 105 ntBASIC0.18□□□□□ -2.38
CopeO89079 Gm27668-201ENSMUST00000184188 120 ntBASIC0.18□□□□□ -2.38
CopeO89079 Gm44726-201ENSMUST00000203427 217 ntBASIC0.18□□□□□ -2.38
CopeO89079 AC192616.1-201ENSMUST00000221922 132 ntBASIC0.18□□□□□ -2.38
CopeO89079 AC160115.1-201ENSMUST00000224678 1574 ntBASIC0.18□□□□□ -2.38
CopeO89079 Gm22003-201ENSMUST00000101885 107 ntBASIC0.17□□□□□ -2.38
CopeO89079 Gm6985-201ENSMUST00000121255 271 ntBASIC0.17□□□□□ -2.38
CopeO89079 Gm14773-201ENSMUST00000125932 451 ntTSL 2 BASIC0.17□□□□□ -2.38
CopeO89079 Gm23410-201ENSMUST00000179967 107 ntBASIC0.17□□□□□ -2.38
CopeO89079 Gm22756-201ENSMUST00000180118 107 ntBASIC0.17□□□□□ -2.38
CopeO89079 Mir6365-201ENSMUST00000183990 101 ntBASIC0.17□□□□□ -2.38
CopeO89079 Gm28541-201ENSMUST00000185206 442 ntTSL 5 BASIC0.17□□□□□ -2.38
CopeO89079 Gm28585-201ENSMUST00000187587 442 ntTSL 5 BASIC0.17□□□□□ -2.38
CopeO89079 Gm28811-201ENSMUST00000190650 442 ntTSL 5 BASIC0.17□□□□□ -2.38
CopeO89079 AC166358.10-201ENSMUST00000220556 144 ntBASIC0.17□□□□□ -2.38
CopeO89079 AC159625.1-201ENSMUST00000220994 2625 ntBASIC0.17□□□□□ -2.38
CopeO89079 Gm22505-201ENSMUST00000082956 108 ntBASIC0.17□□□□□ -2.38
CopeO89079 Gm22363-201ENSMUST00000083100 108 ntBASIC0.17□□□□□ -2.38
CopeO89079 Gm24042-201ENSMUST00000083114 103 ntBASIC0.17□□□□□ -2.38
CopeO89079 Gm23814-201ENSMUST00000083230 102 ntBASIC0.17□□□□□ -2.38
CopeO89079 Gm23095-201ENSMUST00000083446 107 ntBASIC0.17□□□□□ -2.38
CopeO89079 Mir709-201ENSMUST00000102190 88 ntBASIC0.16□□□□□ -2.38
CopeO89079 Mir465b-1-201ENSMUST00000103940 79 ntBASIC0.16□□□□□ -2.38
CopeO89079 Gm22469-201ENSMUST00000104118 133 ntBASIC0.16□□□□□ -2.38
CopeO89079 Mir465b-2-201ENSMUST00000104662 79 ntBASIC0.16□□□□□ -2.38
CopeO89079 Gm14491-201ENSMUST00000121919 199 ntBASIC0.16□□□□□ -2.38
CopeO89079 Gm24438-201ENSMUST00000157893 115 ntBASIC0.16□□□□□ -2.38
CopeO89079 Gm22841-201ENSMUST00000158443 62 ntBASIC0.16□□□□□ -2.38
Retrieved 100 of 76,532 protein–RNA pairs in 86.7 ms