Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Mir7675-201ENSMUST00000184262 58 ntBASIC1.32□□□□□ -2.2
ClppO88696 Gm28016-201ENSMUST00000184594 196 ntBASIC1.32□□□□□ -2.2
ClppO88696 AC139186.1-201ENSMUST00000197610 94 ntBASIC1.32□□□□□ -2.2
ClppO88696 AC154636.2-201ENSMUST00000222538 161 ntBASIC1.32□□□□□ -2.2
ClppO88696 AC173482.5-201ENSMUST00000224181 327 ntBASIC1.32□□□□□ -2.2
ClppO88696 Mir155-201ENSMUST00000083463 65 ntBASIC1.32□□□□□ -2.2
ClppO88696 Mir343-201ENSMUST00000102360 75 ntBASIC1.31□□□□□ -2.2
ClppO88696 Gm28008-201ENSMUST00000184021 186 ntBASIC1.31□□□□□ -2.2
ClppO88696 Gm7240-201ENSMUST00000220769 664 ntBASIC1.31□□□□□ -2.2
ClppO88696 Gm24038-201ENSMUST00000082872 159 ntBASIC1.31□□□□□ -2.2
ClppO88696 Gm44240-201ENSMUST00000204015 2654 ntBASIC1.31□□□□□ -2.2
ClppO88696 Gm23492-201ENSMUST00000116837 115 ntBASIC1.3□□□□□ -2.2
ClppO88696 Gm13725-201ENSMUST00000122139 207 ntBASIC1.3□□□□□ -2.2
ClppO88696 Gm24915-201ENSMUST00000157288 78 ntBASIC1.3□□□□□ -2.2
ClppO88696 Gm22242-201ENSMUST00000175224 118 ntBASIC1.3□□□□□ -2.2
ClppO88696 Gm22448-201ENSMUST00000179254 107 ntBASIC1.3□□□□□ -2.2
ClppO88696 Gm27493-201ENSMUST00000184128 78 ntBASIC1.3□□□□□ -2.2
ClppO88696 Gm24252-201ENSMUST00000083700 132 ntBASIC1.3□□□□□ -2.2
ClppO88696 Gm25848-201ENSMUST00000116790 144 ntBASIC1.29□□□□□ -2.2
ClppO88696 Gm23336-201ENSMUST00000117023 123 ntBASIC1.29□□□□□ -2.2
ClppO88696 Gm14917-201ENSMUST00000118872 2105 ntBASIC1.29□□□□□ -2.2
ClppO88696 Gm24440-201ENSMUST00000157236 63 ntBASIC1.29□□□□□ -2.2
ClppO88696 Gm24512-201ENSMUST00000174963 65 ntBASIC1.29□□□□□ -2.2
ClppO88696 Gm42719-201ENSMUST00000197393 355 ntBASIC1.29□□□□□ -2.2
ClppO88696 Gm42774-201ENSMUST00000198854 283 ntBASIC1.29□□□□□ -2.2
ClppO88696 AC115735.2-201ENSMUST00000227135 351 ntBASIC1.29□□□□□ -2.2
ClppO88696 AC158981.3-202ENSMUST00000228906 523 ntBASIC1.29□□□□□ -2.2
ClppO88696 Mup-ps22-201ENSMUST00000121611 243 ntBASIC1.28□□□□□ -2.2
ClppO88696 Mir1904-201ENSMUST00000122702 80 ntBASIC1.28□□□□□ -2.2
ClppO88696 Gm26363-201ENSMUST00000158866 83 ntBASIC1.28□□□□□ -2.2
ClppO88696 Mir6951-201ENSMUST00000183910 75 ntBASIC1.28□□□□□ -2.2
ClppO88696 Gm28409-201ENSMUST00000187064 103 ntBASIC1.28□□□□□ -2.2
ClppO88696 Gm28661-201ENSMUST00000188231 681 ntBASIC1.28□□□□□ -2.2
ClppO88696 Gm43406-201ENSMUST00000200356 334 ntBASIC1.28□□□□□ -2.2
ClppO88696 Mir7227-201ENSMUST00000200408 59 ntBASIC1.28□□□□□ -2.2
ClppO88696 Gm44028-201ENSMUST00000205205 355 ntTSL 5 BASIC1.28□□□□□ -2.2
ClppO88696 Gm24261-201ENSMUST00000083744 104 ntBASIC1.28□□□□□ -2.2
ClppO88696 BC022960-201ENSMUST00000119987 1815 ntBASIC1.28□□□□□ -2.2
ClppO88696 Vmn1r75-202ENSMUST00000226622 6638 ntAPPRIS P2 BASIC1.28□□□□□ -2.21
ClppO88696 Vmn1r75-207ENSMUST00000228646 4466 ntAPPRIS ALT2 BASIC1.27□□□□□ -2.21
ClppO88696 Gm15379-201ENSMUST00000121224 648 ntBASIC1.27□□□□□ -2.21
ClppO88696 Gm23329-201ENSMUST00000157415 108 ntBASIC1.27□□□□□ -2.21
ClppO88696 Gm2962-201ENSMUST00000159266 336 ntBASIC1.27□□□□□ -2.21
ClppO88696 Gm28579-201ENSMUST00000186143 369 ntBASIC1.27□□□□□ -2.21
ClppO88696 Gm34015-201ENSMUST00000194908 451 ntBASIC1.27□□□□□ -2.21
ClppO88696 Gm45005-201ENSMUST00000206640 157 ntBASIC1.27□□□□□ -2.21
ClppO88696 Gm22248-201ENSMUST00000082482 150 ntBASIC1.27□□□□□ -2.21
ClppO88696 Gm25512-201ENSMUST00000083863 107 ntBASIC1.27□□□□□ -2.21
ClppO88696 Gm37824-201ENSMUST00000193430 3236 ntBASIC1.27□□□□□ -2.21
ClppO88696 Olfr820-203ENSMUST00000215791 3956 ntAPPRIS P1 TSL 5 BASIC1.26□□□□□ -2.21
ClppO88696 Gm24865-201ENSMUST00000103246 96 ntBASIC1.26□□□□□ -2.21
ClppO88696 Gm15214-201ENSMUST00000122155 470 ntBASIC1.26□□□□□ -2.21
ClppO88696 Gm15391-201ENSMUST00000147509 257 ntTSL 3 BASIC1.26□□□□□ -2.21
ClppO88696 Gm27723-201ENSMUST00000157398 63 ntBASIC1.26□□□□□ -2.21
ClppO88696 Gm23339-201ENSMUST00000158962 139 ntBASIC1.26□□□□□ -2.21
ClppO88696 Olfr515-ps1-201ENSMUST00000208389 189 ntBASIC1.26□□□□□ -2.21
ClppO88696 Gm25204-201ENSMUST00000082843 106 ntBASIC1.26□□□□□ -2.21
ClppO88696 Gm25038-201ENSMUST00000082928 130 ntBASIC1.26□□□□□ -2.21
ClppO88696 Rps24-ps2-201ENSMUST00000091375 395 ntBASIC1.26□□□□□ -2.21
ClppO88696 Gm44177-201ENSMUST00000204338 2667 ntBASIC1.26□□□□□ -2.21
ClppO88696 Gm18795-202ENSMUST00000223373 2920 ntBASIC1.25□□□□□ -2.21
ClppO88696 Mir544-201ENSMUST00000103813 78 ntBASIC1.25□□□□□ -2.21
ClppO88696 Gm22780-201ENSMUST00000104084 132 ntBASIC1.25□□□□□ -2.21
ClppO88696 Gm12924-201ENSMUST00000121747 318 ntBASIC1.25□□□□□ -2.21
ClppO88696 Zfp969-202ENSMUST00000131041 252 ntTSL 2 BASIC1.25□□□□□ -2.21
ClppO88696 Gm25884-201ENSMUST00000157782 62 ntBASIC1.25□□□□□ -2.21
ClppO88696 Gm23083-201ENSMUST00000157851 116 ntBASIC1.25□□□□□ -2.21
ClppO88696 Mir1951-201ENSMUST00000157981 89 ntBASIC1.25□□□□□ -2.21
ClppO88696 Gm24724-201ENSMUST00000158230 107 ntBASIC1.25□□□□□ -2.21
ClppO88696 Gm22434-201ENSMUST00000158549 122 ntBASIC1.25□□□□□ -2.21
ClppO88696 Gm26029-201ENSMUST00000158659 132 ntBASIC1.25□□□□□ -2.21
ClppO88696 Gm26022-201ENSMUST00000158663 108 ntBASIC1.25□□□□□ -2.21
ClppO88696 Gm24154-201ENSMUST00000175261 130 ntBASIC1.25□□□□□ -2.21
ClppO88696 Gm19777-201ENSMUST00000191940 358 ntBASIC1.25□□□□□ -2.21
ClppO88696 Gm44352-201ENSMUST00000196358 110 ntBASIC1.25□□□□□ -2.21
ClppO88696 Olfr454-ps1-201ENSMUST00000205206 348 ntBASIC1.25□□□□□ -2.21
ClppO88696 Gm45616-201ENSMUST00000211711 319 ntBASIC1.25□□□□□ -2.21
ClppO88696 Gm23406-201ENSMUST00000082537 122 ntBASIC1.25□□□□□ -2.21
ClppO88696 Gm23345-201ENSMUST00000083817 150 ntBASIC1.25□□□□□ -2.21
ClppO88696 Gm23766-201ENSMUST00000103894 80 ntBASIC1.24□□□□□ -2.21
ClppO88696 Rpl30-ps5-201ENSMUST00000117104 361 ntBASIC1.24□□□□□ -2.21
ClppO88696 Gm14923-201ENSMUST00000118270 155 ntBASIC1.24□□□□□ -2.21
ClppO88696 Gm12309-201ENSMUST00000119889 182 ntBASIC1.24□□□□□ -2.21
ClppO88696 Gm15327-202ENSMUST00000153958 467 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
ClppO88696 Gm23982-201ENSMUST00000157141 106 ntBASIC1.24□□□□□ -2.21
ClppO88696 Gm24777-201ENSMUST00000157644 107 ntBASIC1.24□□□□□ -2.21
ClppO88696 Gm17196-201ENSMUST00000164074 345 ntTSL 5 BASIC1.24□□□□□ -2.21
ClppO88696 Traj60-201ENSMUST00000167781 54 ntBASIC1.24□□□□□ -2.21
ClppO88696 Gm36546-201ENSMUST00000206372 230 ntTSL 5 BASIC1.24□□□□□ -2.21
ClppO88696 AC154552.1-201ENSMUST00000222969 202 ntBASIC1.24□□□□□ -2.21
ClppO88696 Sva-201ENSMUST00000024059 651 ntAPPRIS P2 TSL 1 (best) BASIC1.24□□□□□ -2.21
ClppO88696 Gm24316-201ENSMUST00000083041 107 ntBASIC1.24□□□□□ -2.21
ClppO88696 Gm26495-201ENSMUST00000083152 137 ntBASIC1.24□□□□□ -2.21
ClppO88696 8030445P17Rik-201ENSMUST00000192614 2741 ntBASIC1.24□□□□□ -2.21
ClppO88696 Gm12080-201ENSMUST00000119821 1883 ntBASIC1.23□□□□□ -2.21
ClppO88696 Igkv13-84-201ENSMUST00000103339 347 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
ClppO88696 Mir669d-2-201ENSMUST00000116854 86 ntBASIC1.23□□□□□ -2.21
ClppO88696 Gm14919-201ENSMUST00000120839 390 ntBASIC1.23□□□□□ -2.21
ClppO88696 Gm15213-201ENSMUST00000122098 216 ntBASIC1.23□□□□□ -2.21
ClppO88696 Gm22479-201ENSMUST00000122566 81 ntBASIC1.23□□□□□ -2.21
Retrieved 100 of 76,532 protein–RNA pairs in 86.7 ms