Protein–RNA interactions for Protein: O88609

Lmx1b, LIM homeobox transcription factor 1-beta, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmx1bO88609 Mir378a-201ENSMUST00000198300 66 ntBASIC2.21□□□□□ -2.06
Lmx1bO88609 Gm43626-201ENSMUST00000198575 162 ntBASIC2.21□□□□□ -2.06
Lmx1bO88609 Gm43587-201ENSMUST00000199590 204 ntBASIC2.21□□□□□ -2.06
Lmx1bO88609 Gm44052-201ENSMUST00000203382 396 ntBASIC2.21□□□□□ -2.06
Lmx1bO88609 Gm10172-201ENSMUST00000085929 558 ntBASIC2.21□□□□□ -2.06
Lmx1bO88609 F8-202ENSMUST00000114085 7295 ntAPPRIS ALT2 TSL 1 (best) BASIC2.21□□□□□ -2.06
Lmx1bO88609 Zfp788-207ENSMUST00000170770 2499 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
Lmx1bO88609 Olfr339-202ENSMUST00000216645 4867 ntAPPRIS P1 TSL 3 BASIC2.2□□□□□ -2.06
Lmx1bO88609 Skint6-202ENSMUST00000171224 3723 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
Lmx1bO88609 Olfr498-201ENSMUST00000217616 2260 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
Lmx1bO88609 Gm43706-201ENSMUST00000198767 2652 ntBASIC2.2□□□□□ -2.06
Lmx1bO88609 Gm45393-201ENSMUST00000211634 2631 ntBASIC2.2□□□□□ -2.06
Lmx1bO88609 Igkv4-63-201ENSMUST00000103351 286 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
Lmx1bO88609 Gm11060-201ENSMUST00000111107 72 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
Lmx1bO88609 n-R5s189-201ENSMUST00000122675 114 ntBASIC2.2□□□□□ -2.06
Lmx1bO88609 Gm11192-201ENSMUST00000127017 151 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
Lmx1bO88609 Gm26099-201ENSMUST00000157248 109 ntBASIC2.2□□□□□ -2.06
Lmx1bO88609 Gm22850-201ENSMUST00000157714 82 ntBASIC2.2□□□□□ -2.06
Lmx1bO88609 Gm23044-201ENSMUST00000157891 100 ntBASIC2.2□□□□□ -2.06
Lmx1bO88609 Gm23033-201ENSMUST00000157996 134 ntBASIC2.2□□□□□ -2.06
Lmx1bO88609 Gm20438-201ENSMUST00000174441 329 ntBASIC2.2□□□□□ -2.06
Lmx1bO88609 Gm28912-201ENSMUST00000189001 234 ntBASIC2.2□□□□□ -2.06
Lmx1bO88609 Gm21064-202ENSMUST00000190583 278 ntBASIC2.2□□□□□ -2.06
Lmx1bO88609 Gm42716-203ENSMUST00000197140 259 ntTSL 3 BASIC2.2□□□□□ -2.06
Lmx1bO88609 Trav5-2-201ENSMUST00000199855 280 ntBASIC2.2□□□□□ -2.06
Lmx1bO88609 Gm45456-201ENSMUST00000210841 243 ntBASIC2.2□□□□□ -2.06
Lmx1bO88609 Gm24705-201ENSMUST00000082808 107 ntBASIC2.2□□□□□ -2.06
Lmx1bO88609 Gm24616-201ENSMUST00000083274 139 ntBASIC2.2□□□□□ -2.06
Lmx1bO88609 Gm24698-201ENSMUST00000083883 130 ntBASIC2.2□□□□□ -2.06
Lmx1bO88609 Gm43877-201ENSMUST00000205029 2238 ntBASIC2.19□□□□□ -2.06
Lmx1bO88609 Pak3-210ENSMUST00000172330 8135 ntAPPRIS P3 TSL 1 (best) BASIC2.19□□□□□ -2.06
Lmx1bO88609 Mir542-201ENSMUST00000102186 85 ntBASIC2.19□□□□□ -2.06
Lmx1bO88609 Gm13756-201ENSMUST00000117618 222 ntBASIC2.19□□□□□ -2.06
Lmx1bO88609 Gm11334-201ENSMUST00000121969 156 ntBASIC2.19□□□□□ -2.06
Lmx1bO88609 n-R5s191-201ENSMUST00000122724 116 ntBASIC2.19□□□□□ -2.06
Lmx1bO88609 Gm23980-201ENSMUST00000157135 158 ntBASIC2.19□□□□□ -2.06
Lmx1bO88609 Gm22227-201ENSMUST00000157356 259 ntBASIC2.19□□□□□ -2.06
Lmx1bO88609 Gm24510-201ENSMUST00000174965 94 ntBASIC2.19□□□□□ -2.06
Lmx1bO88609 Gm28409-201ENSMUST00000187064 103 ntBASIC2.19□□□□□ -2.06
Lmx1bO88609 Trav14-1-201ENSMUST00000198297 399 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
Lmx1bO88609 Gm24148-201ENSMUST00000082762 80 ntBASIC2.19□□□□□ -2.06
Lmx1bO88609 Mir218-1-201ENSMUST00000083669 110 ntBASIC2.19□□□□□ -2.06
Lmx1bO88609 Gm44114-201ENSMUST00000203270 2727 ntBASIC2.19□□□□□ -2.06
Lmx1bO88609 Gm38162-201ENSMUST00000195562 4597 ntBASIC2.19□□□□□ -2.06
Lmx1bO88609 Hif1a-202ENSMUST00000110461 4385 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
Lmx1bO88609 Gm24141-201ENSMUST00000122776 115 ntBASIC2.18□□□□□ -2.06
Lmx1bO88609 Gm26360-201ENSMUST00000158872 103 ntBASIC2.18□□□□□ -2.06
Lmx1bO88609 Gm22775-201ENSMUST00000177630 120 ntBASIC2.18□□□□□ -2.06
Lmx1bO88609 Gm23569-201ENSMUST00000180120 120 ntBASIC2.18□□□□□ -2.06
Lmx1bO88609 Gm27399-201ENSMUST00000184250 78 ntBASIC2.18□□□□□ -2.06
Lmx1bO88609 Gm18546-201ENSMUST00000197245 676 ntBASIC2.18□□□□□ -2.06
Lmx1bO88609 Gm44326-201ENSMUST00000198226 101 ntBASIC2.18□□□□□ -2.06
Lmx1bO88609 Gm20083-201ENSMUST00000205849 751 ntTSL 3 BASIC2.18□□□□□ -2.06
Lmx1bO88609 Ifi214-203ENSMUST00000139092 2888 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
Lmx1bO88609 Rps15a-ps6-201ENSMUST00000117476 393 ntBASIC2.17□□□□□ -2.06
Lmx1bO88609 Gm16355-201ENSMUST00000128606 231 ntBASIC2.17□□□□□ -2.06
Lmx1bO88609 Gm26105-201ENSMUST00000157253 190 ntBASIC2.17□□□□□ -2.06
Lmx1bO88609 Gm23260-201ENSMUST00000158317 172 ntBASIC2.17□□□□□ -2.06
Lmx1bO88609 Gm24771-201ENSMUST00000158508 137 ntBASIC2.17□□□□□ -2.06
Lmx1bO88609 Gm24813-201ENSMUST00000175310 84 ntBASIC2.17□□□□□ -2.06
Lmx1bO88609 Rpl31-ps15-201ENSMUST00000181857 375 ntBASIC2.17□□□□□ -2.06
Lmx1bO88609 Gm3852-201ENSMUST00000182781 264 ntBASIC2.17□□□□□ -2.06
Lmx1bO88609 Gm27959-201ENSMUST00000185172 111 ntBASIC2.17□□□□□ -2.06
Lmx1bO88609 Gm37545-201ENSMUST00000186512 148 ntBASIC2.17□□□□□ -2.06
Lmx1bO88609 Gm28169-201ENSMUST00000190342 345 ntBASIC2.17□□□□□ -2.06
Lmx1bO88609 Mir497-201ENSMUST00000200557 84 ntBASIC2.17□□□□□ -2.06
Lmx1bO88609 AC122465.2-201ENSMUST00000221774 354 ntBASIC2.17□□□□□ -2.06
Lmx1bO88609 Vmn1r29-204ENSMUST00000228038 4520 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
Lmx1bO88609 Zfp616-205ENSMUST00000178159 2964 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
Lmx1bO88609 Olfr711-203ENSMUST00000216335 4724 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
Lmx1bO88609 Gm14843-201ENSMUST00000119596 212 ntBASIC2.16□□□□□ -2.06
Lmx1bO88609 Gm23223-201ENSMUST00000158119 127 ntBASIC2.16□□□□□ -2.06
Lmx1bO88609 Gm25491-201ENSMUST00000158733 308 ntBASIC2.16□□□□□ -2.06
Lmx1bO88609 Gm24304-201ENSMUST00000177635 107 ntBASIC2.16□□□□□ -2.06
Lmx1bO88609 Gm37116-201ENSMUST00000195161 147 ntBASIC2.16□□□□□ -2.06
Lmx1bO88609 AC149294.9-201ENSMUST00000227256 164 ntBASIC2.16□□□□□ -2.06
Lmx1bO88609 AC127578.1-201ENSMUST00000227289 93 ntBASIC2.16□□□□□ -2.06
Lmx1bO88609 Gm25130-201ENSMUST00000082650 156 ntBASIC2.16□□□□□ -2.06
Lmx1bO88609 Gm25513-201ENSMUST00000083861 162 ntBASIC2.16□□□□□ -2.06
Lmx1bO88609 Gm21876-201ENSMUST00000096511 282 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
Lmx1bO88609 Olfr1186-202ENSMUST00000215912 1850 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
Lmx1bO88609 Gm44133-202ENSMUST00000204450 2586 ntBASIC2.15□□□□□ -2.06
Lmx1bO88609 AC123052.1-201ENSMUST00000220604 4616 ntBASIC2.15□□□□□ -2.06
Lmx1bO88609 AC125374.3-201ENSMUST00000214983 2810 ntBASIC2.15□□□□□ -2.06
Lmx1bO88609 Ifi203-202ENSMUST00000081216 3610 ntAPPRIS P3 TSL 1 (best) BASIC2.15□□□□□ -2.06
Lmx1bO88609 Gm23080-201ENSMUST00000157846 103 ntBASIC2.15□□□□□ -2.07
Lmx1bO88609 Gm22966-201ENSMUST00000157957 129 ntBASIC2.15□□□□□ -2.07
Lmx1bO88609 Gm24212-201ENSMUST00000158258 132 ntBASIC2.15□□□□□ -2.07
Lmx1bO88609 Gm24210-201ENSMUST00000158263 133 ntBASIC2.15□□□□□ -2.07
Lmx1bO88609 Trav7-6-202ENSMUST00000184687 275 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
Lmx1bO88609 Gm45492-201ENSMUST00000211611 288 ntBASIC2.15□□□□□ -2.07
Lmx1bO88609 Gm8031-201ENSMUST00000213430 626 ntBASIC2.15□□□□□ -2.07
Lmx1bO88609 Snord104-201ENSMUST00000083192 70 ntBASIC2.15□□□□□ -2.07
Lmx1bO88609 Mir423-201ENSMUST00000083584 109 ntBASIC2.15□□□□□ -2.07
Lmx1bO88609 Gm24449-201ENSMUST00000083985 106 ntBASIC2.15□□□□□ -2.07
Lmx1bO88609 Olfr1229-203ENSMUST00000214593 3404 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
Lmx1bO88609 Gm23772-201ENSMUST00000104433 102 ntBASIC2.14□□□□□ -2.07
Lmx1bO88609 Snord90-201ENSMUST00000104568 111 ntBASIC2.14□□□□□ -2.07
Lmx1bO88609 Gm24482-201ENSMUST00000117005 93 ntBASIC2.14□□□□□ -2.07
Lmx1bO88609 Gm25825-201ENSMUST00000157091 124 ntBASIC2.14□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 82.3 ms