Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Mir1933-201ENSMUST00000158930 88 ntBASIC-0.08□□□□□ -2.42
Hmgb3O54879 Gm23008-201ENSMUST00000158946 80 ntBASIC-0.08□□□□□ -2.42
Hmgb3O54879 Mir8107-201ENSMUST00000184024 117 ntBASIC-0.08□□□□□ -2.42
Hmgb3O54879 Gm27226-201ENSMUST00000184676 511 ntTSL 2 BASIC-0.08□□□□□ -2.42
Hmgb3O54879 Gm44135-201ENSMUST00000205221 368 ntBASIC-0.08□□□□□ -2.42
Hmgb3O54879 Mir34a-201ENSMUST00000083559 102 ntBASIC-0.08□□□□□ -2.42
Hmgb3O54879 D730048I06Rik-201ENSMUST00000034619 1334 ntAPPRIS P1 TSL 1 (best) BASIC-0.09□□□□□ -2.42
Hmgb3O54879 Gm22368-201ENSMUST00000102416 109 ntBASIC-0.09□□□□□ -2.42
Hmgb3O54879 Gm23013-201ENSMUST00000104146 106 ntBASIC-0.09□□□□□ -2.42
Hmgb3O54879 Gm25805-201ENSMUST00000122788 108 ntBASIC-0.09□□□□□ -2.42
Hmgb3O54879 Gm22077-201ENSMUST00000157594 93 ntBASIC-0.09□□□□□ -2.42
Hmgb3O54879 Gm22945-201ENSMUST00000158557 157 ntBASIC-0.09□□□□□ -2.42
Hmgb3O54879 Gm28288-201ENSMUST00000191019 214 ntBASIC-0.09□□□□□ -2.42
Hmgb3O54879 Gm43406-201ENSMUST00000200356 334 ntBASIC-0.09□□□□□ -2.42
Hmgb3O54879 Gm3702-201ENSMUST00000211754 346 ntBASIC-0.09□□□□□ -2.42
Hmgb3O54879 AC159885.1-201ENSMUST00000222221 199 ntBASIC-0.09□□□□□ -2.42
Hmgb3O54879 CT010454.1-201ENSMUST00000225975 265 ntBASIC-0.09□□□□□ -2.42
Hmgb3O54879 Gm22003-201ENSMUST00000101885 107 ntBASIC-0.1□□□□□ -2.43
Hmgb3O54879 Gm22834-201ENSMUST00000102021 79 ntBASIC-0.1□□□□□ -2.43
Hmgb3O54879 Gm25300-201ENSMUST00000175284 84 ntBASIC-0.1□□□□□ -2.43
Hmgb3O54879 Gm22756-201ENSMUST00000180118 107 ntBASIC-0.1□□□□□ -2.43
Hmgb3O54879 Gm25284-201ENSMUST00000180345 141 ntBASIC-0.1□□□□□ -2.43
Hmgb3O54879 Gm6105-201ENSMUST00000200580 624 ntBASIC-0.1□□□□□ -2.43
Hmgb3O54879 Gm23095-201ENSMUST00000083446 107 ntBASIC-0.1□□□□□ -2.43
Hmgb3O54879 Mir10b-201ENSMUST00000083566 68 ntBASIC-0.1□□□□□ -2.43
Hmgb3O54879 Gm26500-201ENSMUST00000101867 106 ntBASIC-0.11□□□□□ -2.43
Hmgb3O54879 Gm17132-201ENSMUST00000109542 1158 ntBASIC-0.11□□□□□ -2.43
Hmgb3O54879 Gm25718-201ENSMUST00000158632 118 ntBASIC-0.11□□□□□ -2.43
Hmgb3O54879 Gm23145-201ENSMUST00000178912 79 ntBASIC-0.11□□□□□ -2.43
Hmgb3O54879 Gm29014-201ENSMUST00000191422 326 ntBASIC-0.11□□□□□ -2.43
Hmgb3O54879 4930522L14Rik-202ENSMUST00000112547 2001 ntAPPRIS P1 TSL 5 BASIC-0.11□□□□□ -2.43
Hmgb3O54879 Gm26135-201ENSMUST00000101993 72 ntBASIC-0.12□□□□□ -2.43
Hmgb3O54879 Gm14782-201ENSMUST00000120151 195 ntBASIC-0.12□□□□□ -2.43
Hmgb3O54879 Gm25976-201ENSMUST00000158695 130 ntBASIC-0.12□□□□□ -2.43
Hmgb3O54879 Snord50b-201ENSMUST00000178497 72 ntBASIC-0.12□□□□□ -2.43
Hmgb3O54879 Mir7077-201ENSMUST00000183991 57 ntBASIC-0.12□□□□□ -2.43
Hmgb3O54879 Gm37438-201ENSMUST00000192813 393 ntBASIC-0.12□□□□□ -2.43
Hmgb3O54879 AC112972.1-201ENSMUST00000227329 365 ntBASIC-0.12□□□□□ -2.43
Hmgb3O54879 Snord82-201ENSMUST00000082889 70 ntBASIC-0.12□□□□□ -2.43
Hmgb3O54879 Gm23041-201ENSMUST00000083868 106 ntBASIC-0.12□□□□□ -2.43
Hmgb3O54879 Gm43885-201ENSMUST00000204928 2542 ntBASIC-0.12□□□□□ -2.43
Hmgb3O54879 Snord69-201ENSMUST00000104024 80 ntBASIC-0.13□□□□□ -2.43
Hmgb3O54879 Gm14491-201ENSMUST00000121919 199 ntBASIC-0.13□□□□□ -2.43
Hmgb3O54879 Gm14413-201ENSMUST00000122158 408 ntBASIC-0.13□□□□□ -2.43
Hmgb3O54879 Gm27926-201ENSMUST00000157180 66 ntBASIC-0.13□□□□□ -2.43
Hmgb3O54879 Gm24500-201ENSMUST00000158447 124 ntBASIC-0.13□□□□□ -2.43
Hmgb3O54879 Gm24880-201ENSMUST00000158776 85 ntBASIC-0.13□□□□□ -2.43
Hmgb3O54879 Gm22801-201ENSMUST00000175624 84 ntBASIC-0.13□□□□□ -2.43
Hmgb3O54879 Gm43140-201ENSMUST00000197317 456 ntTSL 2 BASIC-0.13□□□□□ -2.43
Hmgb3O54879 Gm44457-201ENSMUST00000198109 76 ntBASIC-0.13□□□□□ -2.43
Hmgb3O54879 Gm5034-201ENSMUST00000199115 634 ntBASIC-0.13□□□□□ -2.43
Hmgb3O54879 Gm22283-201ENSMUST00000082556 161 ntBASIC-0.13□□□□□ -2.43
Hmgb3O54879 n-R5s73-201ENSMUST00000122508 107 ntBASIC-0.14□□□□□ -2.43
Hmgb3O54879 Gm44345-201ENSMUST00000199560 135 ntBASIC-0.14□□□□□ -2.43
Hmgb3O54879 Gm44455-201ENSMUST00000200061 82 ntBASIC-0.14□□□□□ -2.43
Hmgb3O54879 Gm25814-201ENSMUST00000082754 107 ntBASIC-0.14□□□□□ -2.43
Hmgb3O54879 Mir30a-201ENSMUST00000083471 71 ntBASIC-0.14□□□□□ -2.43
Hmgb3O54879 Mir448-201ENSMUST00000083516 112 ntBASIC-0.14□□□□□ -2.43
Hmgb3O54879 Trgj3-201ENSMUST00000103562 60 ntAPPRIS P1 BASIC-0.15□□□□□ -2.43
Hmgb3O54879 Snord98-201ENSMUST00000116819 65 ntBASIC-0.15□□□□□ -2.43
Hmgb3O54879 Gm14536-201ENSMUST00000118324 138 ntBASIC-0.15□□□□□ -2.43
Hmgb3O54879 Gm15027-201ENSMUST00000120922 138 ntBASIC-0.15□□□□□ -2.43
Hmgb3O54879 Gm24630-201ENSMUST00000122768 106 ntBASIC-0.15□□□□□ -2.43
Hmgb3O54879 Gm23584-201ENSMUST00000157655 129 ntBASIC-0.15□□□□□ -2.43
Hmgb3O54879 Gm18588-201ENSMUST00000177308 492 ntBASIC-0.15□□□□□ -2.43
Hmgb3O54879 Gm28001-201ENSMUST00000183561 117 ntBASIC-0.15□□□□□ -2.43
Hmgb3O54879 Gm28541-201ENSMUST00000185206 442 ntTSL 5 BASIC-0.15□□□□□ -2.43
Hmgb3O54879 Gm28585-201ENSMUST00000187587 442 ntTSL 5 BASIC-0.15□□□□□ -2.43
Hmgb3O54879 Gm28811-201ENSMUST00000190650 442 ntTSL 5 BASIC-0.15□□□□□ -2.43
Hmgb3O54879 Gm37808-201ENSMUST00000192038 442 ntTSL 5 BASIC-0.15□□□□□ -2.43
Hmgb3O54879 Gm44052-201ENSMUST00000203382 396 ntBASIC-0.15□□□□□ -2.43
Hmgb3O54879 Gm45374-201ENSMUST00000211388 136 ntBASIC-0.15□□□□□ -2.43
Hmgb3O54879 Gm5023-201ENSMUST00000217442 587 ntBASIC-0.15□□□□□ -2.43
Hmgb3O54879 Gm22021-201ENSMUST00000104353 107 ntBASIC-0.16□□□□□ -2.44
Hmgb3O54879 Sel1l2-201ENSMUST00000120133 579 ntTSL 1 (best) BASIC-0.16□□□□□ -2.44
Hmgb3O54879 Gm10421-202ENSMUST00000186114 132 ntTSL 3 BASIC-0.16□□□□□ -2.44
Hmgb3O54879 Gm28917-201ENSMUST00000187294 237 ntBASIC-0.16□□□□□ -2.44
Hmgb3O54879 Gm28766-201ENSMUST00000191086 234 ntBASIC-0.16□□□□□ -2.44
Hmgb3O54879 Gm42506-201ENSMUST00000202009 150 ntBASIC-0.16□□□□□ -2.44
Hmgb3O54879 AC121844.1-201ENSMUST00000218706 137 ntBASIC-0.16□□□□□ -2.44
Hmgb3O54879 AC122769.2-201ENSMUST00000227248 302 ntBASIC-0.16□□□□□ -2.44
Hmgb3O54879 Vmn1r230-201ENSMUST00000053974 951 ntAPPRIS P1 BASIC-0.16□□□□□ -2.44
Hmgb3O54879 mt-Atp6-201ENSMUST00000082408 681 ntAPPRIS P1 BASIC-0.16□□□□□ -2.44
Hmgb3O54879 Gm23377-201ENSMUST00000082943 126 ntBASIC-0.16□□□□□ -2.44
Hmgb3O54879 Gm25859-201ENSMUST00000083710 91 ntBASIC-0.16□□□□□ -2.44
Hmgb3O54879 Gm26384-201ENSMUST00000102183 110 ntBASIC-0.17□□□□□ -2.44
Hmgb3O54879 Gm25317-201ENSMUST00000116824 129 ntBASIC-0.17□□□□□ -2.44
Hmgb3O54879 Gm11904-201ENSMUST00000120562 248 ntBASIC-0.17□□□□□ -2.44
Hmgb3O54879 Gm24547-201ENSMUST00000158649 149 ntBASIC-0.17□□□□□ -2.44
Hmgb3O54879 Gm24315-201ENSMUST00000177835 127 ntBASIC-0.17□□□□□ -2.44
Hmgb3O54879 Gm21060-201ENSMUST00000179346 168 ntAPPRIS P1 BASIC-0.17□□□□□ -2.44
Hmgb3O54879 Mir6346-201ENSMUST00000183982 81 ntBASIC-0.17□□□□□ -2.44
Hmgb3O54879 Olfr277-ps1-201ENSMUST00000205749 285 ntBASIC-0.17□□□□□ -2.44
Hmgb3O54879 Gm45092-201ENSMUST00000205944 545 ntTSL 3 BASIC-0.17□□□□□ -2.44
Hmgb3O54879 Gm25801-201ENSMUST00000082638 106 ntBASIC-0.17□□□□□ -2.44
Hmgb3O54879 Gm24283-201ENSMUST00000104233 107 ntBASIC-0.18□□□□□ -2.44
Hmgb3O54879 Gm23989-201ENSMUST00000117030 66 ntBASIC-0.18□□□□□ -2.44
Hmgb3O54879 Gm13711-201ENSMUST00000119708 453 ntBASIC-0.18□□□□□ -2.44
Hmgb3O54879 Gm13596-201ENSMUST00000153354 292 ntTSL 5 BASIC-0.18□□□□□ -2.44
Hmgb3O54879 Gm17332-201ENSMUST00000165626 87 ntAPPRIS P1 BASIC-0.18□□□□□ -2.44
Retrieved 100 of 76,532 protein–RNA pairs in 80.7 ms