Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Gm23246-201ENSMUST00000083371 67 ntBASIC1.98□□□□□ -2.09
Shisa8J3QNX5 Gm24929-201ENSMUST00000083403 139 ntBASIC1.98□□□□□ -2.09
Shisa8J3QNX5 Zfp788-207ENSMUST00000170770 2499 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
Shisa8J3QNX5 Ifi214-203ENSMUST00000139092 2888 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
Shisa8J3QNX5 Snhg14-213ENSMUST00000190666 3708 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
Shisa8J3QNX5 Mir1298-201ENSMUST00000116681 98 ntBASIC1.97□□□□□ -2.09
Shisa8J3QNX5 Gm23983-201ENSMUST00000157142 114 ntBASIC1.97□□□□□ -2.09
Shisa8J3QNX5 Gm24911-201ENSMUST00000157292 136 ntBASIC1.97□□□□□ -2.09
Shisa8J3QNX5 Gm25371-201ENSMUST00000158162 101 ntBASIC1.97□□□□□ -2.09
Shisa8J3QNX5 Gm25920-201ENSMUST00000158307 99 ntBASIC1.97□□□□□ -2.09
Shisa8J3QNX5 Mir3103-201ENSMUST00000175474 67 ntBASIC1.97□□□□□ -2.09
Shisa8J3QNX5 Gm16404-201ENSMUST00000177739 468 ntBASIC1.97□□□□□ -2.09
Shisa8J3QNX5 Gm14598-201ENSMUST00000180109 468 ntBASIC1.97□□□□□ -2.09
Shisa8J3QNX5 Gm14625-201ENSMUST00000180231 468 ntBASIC1.97□□□□□ -2.09
Shisa8J3QNX5 Mir7013-201ENSMUST00000183540 72 ntBASIC1.97□□□□□ -2.09
Shisa8J3QNX5 Gm9251-201ENSMUST00000197202 628 ntBASIC1.97□□□□□ -2.09
Shisa8J3QNX5 Gm18546-201ENSMUST00000197245 676 ntBASIC1.97□□□□□ -2.09
Shisa8J3QNX5 Gm40604-202ENSMUST00000219541 522 ntTSL 5 BASIC1.97□□□□□ -2.09
Shisa8J3QNX5 CT030645.1-201ENSMUST00000224020 231 ntBASIC1.97□□□□□ -2.09
Shisa8J3QNX5 AC168880.2-201ENSMUST00000224488 201 ntBASIC1.97□□□□□ -2.09
Shisa8J3QNX5 AC183096.2-201ENSMUST00000228733 457 ntBASIC1.97□□□□□ -2.09
Shisa8J3QNX5 Olfr1148-202ENSMUST00000215230 3095 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
Shisa8J3QNX5 Olfr1177-ps-202ENSMUST00000216713 2821 ntAPPRIS P5 TSL 3 BASIC1.97□□□□□ -2.09
Shisa8J3QNX5 Lipi-201ENSMUST00000062721 2082 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
Shisa8J3QNX5 Knl1-202ENSMUST00000028802 7800 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
Shisa8J3QNX5 Olfr1218-204ENSMUST00000215054 3875 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.09
Shisa8J3QNX5 Gm44527-201ENSMUST00000182210 2945 ntTSL 2 BASIC1.96□□□□□ -2.1
Shisa8J3QNX5 Gm22554-201ENSMUST00000157798 147 ntBASIC1.96□□□□□ -2.1
Shisa8J3QNX5 Gm37693-201ENSMUST00000194562 234 ntBASIC1.96□□□□□ -2.1
Shisa8J3QNX5 Gm43540-201ENSMUST00000196320 3848 ntBASIC1.96□□□□□ -2.1
Shisa8J3QNX5 Mir497-201ENSMUST00000200557 84 ntBASIC1.96□□□□□ -2.1
Shisa8J3QNX5 Gm42960-201ENSMUST00000202160 241 ntBASIC1.96□□□□□ -2.1
Shisa8J3QNX5 Gm45386-201ENSMUST00000210194 218 ntBASIC1.96□□□□□ -2.1
Shisa8J3QNX5 Gm25814-201ENSMUST00000082754 107 ntBASIC1.96□□□□□ -2.1
Shisa8J3QNX5 Gm24615-201ENSMUST00000083268 113 ntBASIC1.96□□□□□ -2.1
Shisa8J3QNX5 Mir155-201ENSMUST00000083463 65 ntBASIC1.96□□□□□ -2.1
Shisa8J3QNX5 Olfr974-202ENSMUST00000213246 3561 ntAPPRIS P1 TSL 2 BASIC1.96□□□□□ -2.1
Shisa8J3QNX5 Gm37895-201ENSMUST00000192448 4550 ntBASIC1.95□□□□□ -2.1
Shisa8J3QNX5 Gm23803-201ENSMUST00000104610 132 ntBASIC1.95□□□□□ -2.1
Shisa8J3QNX5 Gm25529-201ENSMUST00000104850 92 ntBASIC1.95□□□□□ -2.1
Shisa8J3QNX5 Gm14843-201ENSMUST00000119596 212 ntBASIC1.95□□□□□ -2.1
Shisa8J3QNX5 Gm24900-201ENSMUST00000158128 134 ntBASIC1.95□□□□□ -2.1
Shisa8J3QNX5 Gm25488-201ENSMUST00000158728 118 ntBASIC1.95□□□□□ -2.1
Shisa8J3QNX5 Gm22093-201ENSMUST00000158980 111 ntBASIC1.95□□□□□ -2.1
Shisa8J3QNX5 Trbv7-201ENSMUST00000193339 402 ntBASIC1.95□□□□□ -2.1
Shisa8J3QNX5 CT485607.2-201ENSMUST00000214650 91 ntBASIC1.95□□□□□ -2.1
Shisa8J3QNX5 Olfr1153-202ENSMUST00000217436 2144 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
Shisa8J3QNX5 AC192091.2-201ENSMUST00000217869 117 ntBASIC1.95□□□□□ -2.1
Shisa8J3QNX5 Gm19118-201ENSMUST00000222554 98 ntBASIC1.95□□□□□ -2.1
Shisa8J3QNX5 Gm10217-201ENSMUST00000088080 135 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
Shisa8J3QNX5 Vmn1r185-210ENSMUST00000228367 6982 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
Shisa8J3QNX5 Tlr7-201ENSMUST00000060719 3776 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
Shisa8J3QNX5 Olfr830-202ENSMUST00000212723 3105 ntAPPRIS ALT2 TSL 5 BASIC1.94□□□□□ -2.1
Shisa8J3QNX5 Gm1980-201ENSMUST00000123131 2306 ntBASIC1.94□□□□□ -2.1
Shisa8J3QNX5 Trdj2-201ENSMUST00000103683 59 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
Shisa8J3QNX5 Gm12449-201ENSMUST00000117572 234 ntBASIC1.94□□□□□ -2.1
Shisa8J3QNX5 Gm13560-201ENSMUST00000121865 329 ntBASIC1.94□□□□□ -2.1
Shisa8J3QNX5 Rnu7-201ENSMUST00000158458 62 ntBASIC1.94□□□□□ -2.1
Shisa8J3QNX5 Gm23194-201ENSMUST00000158813 105 ntBASIC1.94□□□□□ -2.1
Shisa8J3QNX5 Mir3092-201ENSMUST00000174954 96 ntBASIC1.94□□□□□ -2.1
Shisa8J3QNX5 Mir5118-201ENSMUST00000175551 67 ntBASIC1.94□□□□□ -2.1
Shisa8J3QNX5 Gm23963-201ENSMUST00000179603 77 ntBASIC1.94□□□□□ -2.1
Shisa8J3QNX5 Gm28900-201ENSMUST00000185232 156 ntBASIC1.94□□□□□ -2.1
Shisa8J3QNX5 1700014F14Rik-201ENSMUST00000199566 197 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
Shisa8J3QNX5 Mir7215-201ENSMUST00000200383 51 ntBASIC1.94□□□□□ -2.1
Shisa8J3QNX5 Mir488-201ENSMUST00000093595 109 ntBASIC1.94□□□□□ -2.1
Shisa8J3QNX5 Gpr174-202ENSMUST00000117310 3536 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
Shisa8J3QNX5 Ifi203-209ENSMUST00000156895 3605 ntAPPRIS ALT2 TSL 1 (best) BASIC1.93□□□□□ -2.1
Shisa8J3QNX5 Ifi203-202ENSMUST00000081216 3610 ntAPPRIS P3 TSL 1 (best) BASIC1.93□□□□□ -2.1
Shisa8J3QNX5 Olfr1291-ps1-201ENSMUST00000121345 5403 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
Shisa8J3QNX5 Gm45844-205ENSMUST00000210333 3861 ntAPPRIS P5 TSL 1 (best) BASIC1.93□□□□□ -2.1
Shisa8J3QNX5 Acer3-202ENSMUST00000120520 3964 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
Shisa8J3QNX5 Gm24984-201ENSMUST00000104454 133 ntBASIC1.93□□□□□ -2.1
Shisa8J3QNX5 Gm22373-201ENSMUST00000104584 89 ntBASIC1.93□□□□□ -2.1
Shisa8J3QNX5 Gm23469-201ENSMUST00000157131 104 ntBASIC1.93□□□□□ -2.1
Shisa8J3QNX5 Gm25491-201ENSMUST00000158733 308 ntBASIC1.93□□□□□ -2.1
Shisa8J3QNX5 Gm26291-201ENSMUST00000158889 137 ntBASIC1.93□□□□□ -2.1
Shisa8J3QNX5 Gm25707-201ENSMUST00000175120 96 ntBASIC1.93□□□□□ -2.1
Shisa8J3QNX5 Gm24813-201ENSMUST00000175310 84 ntBASIC1.93□□□□□ -2.1
Shisa8J3QNX5 Gm23922-201ENSMUST00000178792 79 ntBASIC1.93□□□□□ -2.1
Shisa8J3QNX5 Gm24657-201ENSMUST00000180085 79 ntBASIC1.93□□□□□ -2.1
Shisa8J3QNX5 Gm22996-201ENSMUST00000180236 79 ntBASIC1.93□□□□□ -2.1
Shisa8J3QNX5 Mir6376-201ENSMUST00000185149 131 ntBASIC1.93□□□□□ -2.1
Shisa8J3QNX5 Gm43021-201ENSMUST00000198692 337 ntTSL 3 BASIC1.93□□□□□ -2.1
Shisa8J3QNX5 Gm44470-201ENSMUST00000203913 142 ntBASIC1.93□□□□□ -2.1
Shisa8J3QNX5 CT025579.1-201ENSMUST00000223779 366 ntBASIC1.93□□□□□ -2.1
Shisa8J3QNX5 Olfr630-201ENSMUST00000106880 2198 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
Shisa8J3QNX5 Zfp616-205ENSMUST00000178159 2964 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
Shisa8J3QNX5 Zfp735-201ENSMUST00000080407 3746 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
Shisa8J3QNX5 AC160984.1-201ENSMUST00000225855 3154 ntBASIC1.92□□□□□ -2.1
Shisa8J3QNX5 Gm33962-201ENSMUST00000182643 2592 ntBASIC1.92□□□□□ -2.1
Shisa8J3QNX5 Olfr1098-202ENSMUST00000111574 2885 ntAPPRIS P1 TSL 3 BASIC1.92□□□□□ -2.1
Shisa8J3QNX5 Gm23772-201ENSMUST00000104433 102 ntBASIC1.92□□□□□ -2.1
Shisa8J3QNX5 Gm23718-201ENSMUST00000157350 307 ntBASIC1.92□□□□□ -2.1
Shisa8J3QNX5 Gm22731-201ENSMUST00000158086 94 ntBASIC1.92□□□□□ -2.1
Shisa8J3QNX5 Gm25642-201ENSMUST00000175137 66 ntBASIC1.92□□□□□ -2.1
Shisa8J3QNX5 Mir6350-201ENSMUST00000183639 105 ntBASIC1.92□□□□□ -2.1
Shisa8J3QNX5 Gm27878-201ENSMUST00000184000 106 ntBASIC1.92□□□□□ -2.1
Shisa8J3QNX5 Gm20083-201ENSMUST00000205849 751 ntTSL 3 BASIC1.92□□□□□ -2.1
Shisa8J3QNX5 Gm18795-201ENSMUST00000222371 3266 ntTSL 5 BASIC1.92□□□□□ -2.1
Retrieved 100 of 76,532 protein–RNA pairs in 194.7 ms