Protein–RNA interactions for Protein: G3X8Y1

Trim55, MCG19772, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55G3X8Y1 Gm28076-201ENSMUST00000188337 410 ntTSL 3 BASIC2.56□□□□□ -2
Trim55G3X8Y1 Cr2-206ENSMUST00000193801 206 ntTSL 1 (best) BASIC2.56□□□□□ -2
Trim55G3X8Y1 B230207O21Rik-201ENSMUST00000198634 321 ntBASIC2.56□□□□□ -2
Trim55G3X8Y1 Gm25788-201ENSMUST00000082721 131 ntBASIC2.56□□□□□ -2
Trim55G3X8Y1 Gm26154-201ENSMUST00000102339 96 ntBASIC2.55□□□□□ -2
Trim55G3X8Y1 Gm24375-201ENSMUST00000104397 132 ntBASIC2.55□□□□□ -2
Trim55G3X8Y1 Mir1298-201ENSMUST00000116681 98 ntBASIC2.55□□□□□ -2
Trim55G3X8Y1 Gm23600-201ENSMUST00000157260 71 ntBASIC2.55□□□□□ -2
Trim55G3X8Y1 Gm22768-201ENSMUST00000158366 153 ntBASIC2.55□□□□□ -2
Trim55G3X8Y1 Gm22139-201ENSMUST00000158747 105 ntBASIC2.55□□□□□ -2
Trim55G3X8Y1 Mir7217-201ENSMUST00000200304 62 ntBASIC2.55□□□□□ -2
Trim55G3X8Y1 AC151902.2-201ENSMUST00000226419 301 ntBASIC2.55□□□□□ -2
Trim55G3X8Y1 Gm22154-201ENSMUST00000083844 131 ntBASIC2.55□□□□□ -2
Trim55G3X8Y1 F8-202ENSMUST00000114085 7295 ntAPPRIS ALT2 TSL 1 (best) BASIC2.55□□□□□ -2
Trim55G3X8Y1 Olfr124-204ENSMUST00000217365 4365 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Trim55G3X8Y1 Olfr1240-202ENSMUST00000216123 4603 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Trim55G3X8Y1 Gm22083-201ENSMUST00000157586 102 ntBASIC2.54□□□□□ -2
Trim55G3X8Y1 Gm22850-201ENSMUST00000157714 82 ntBASIC2.54□□□□□ -2
Trim55G3X8Y1 Gm25884-201ENSMUST00000157782 62 ntBASIC2.54□□□□□ -2
Trim55G3X8Y1 Gm24333-201ENSMUST00000175101 84 ntBASIC2.54□□□□□ -2
Trim55G3X8Y1 Gm44385-201ENSMUST00000198781 81 ntBASIC2.54□□□□□ -2
Trim55G3X8Y1 CT030645.1-201ENSMUST00000224020 231 ntBASIC2.54□□□□□ -2
Trim55G3X8Y1 Gm24038-201ENSMUST00000082872 159 ntBASIC2.54□□□□□ -2
Trim55G3X8Y1 Mir186-201ENSMUST00000083497 71 ntBASIC2.54□□□□□ -2
Trim55G3X8Y1 Skint6-202ENSMUST00000171224 3723 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Trim55G3X8Y1 Gm42770-201ENSMUST00000199657 4155 ntBASIC2.54□□□□□ -2
Trim55G3X8Y1 Olfr1442-204ENSMUST00000208657 3148 ntAPPRIS P1 TSL 3 BASIC2.54□□□□□ -2
Trim55G3X8Y1 Usp9y-201ENSMUST00000091188 8094 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Trim55G3X8Y1 Zfp616-205ENSMUST00000178159 2964 ntAPPRIS P1 BASIC2.53□□□□□ -2
Trim55G3X8Y1 Olfr868-201ENSMUST00000212767 4196 ntAPPRIS P1 TSL 3 BASIC2.53□□□□□ -2
Trim55G3X8Y1 Traj20-201ENSMUST00000103721 58 ntAPPRIS P1 BASIC2.53□□□□□ -2
Trim55G3X8Y1 Gm22477-201ENSMUST00000122569 316 ntBASIC2.53□□□□□ -2
Trim55G3X8Y1 2210417A02Rik-201ENSMUST00000150265 550 ntTSL 1 (best) BASIC2.53□□□□□ -2
Trim55G3X8Y1 Gm28409-201ENSMUST00000187064 103 ntBASIC2.53□□□□□ -2
Trim55G3X8Y1 Gm29308-201ENSMUST00000188863 315 ntBASIC2.53□□□□□ -2
Trim55G3X8Y1 Gm28537-201ENSMUST00000189026 315 ntBASIC2.53□□□□□ -2
Trim55G3X8Y1 Gm29631-201ENSMUST00000191065 315 ntBASIC2.53□□□□□ -2
Trim55G3X8Y1 Gm38364-201ENSMUST00000191814 179 ntBASIC2.53□□□□□ -2
Trim55G3X8Y1 Gm3724-201ENSMUST00000197957 349 ntBASIC2.53□□□□□ -2
Trim55G3X8Y1 Mir218-1-201ENSMUST00000083669 110 ntBASIC2.53□□□□□ -2
Trim55G3X8Y1 Mir488-201ENSMUST00000093595 109 ntBASIC2.53□□□□□ -2
Trim55G3X8Y1 Gm6377-201ENSMUST00000060013 2793 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Trim55G3X8Y1 Olfr659-202ENSMUST00000214986 4842 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Trim55G3X8Y1 Gm24691-201ENSMUST00000157762 140 ntBASIC2.52□□□□□ -2.01
Trim55G3X8Y1 Gm24851-201ENSMUST00000158028 103 ntBASIC2.52□□□□□ -2.01
Trim55G3X8Y1 Gm23113-201ENSMUST00000158477 99 ntBASIC2.52□□□□□ -2.01
Trim55G3X8Y1 Gm27505-201ENSMUST00000185071 110 ntBASIC2.52□□□□□ -2.01
Trim55G3X8Y1 Gm37116-201ENSMUST00000195161 147 ntBASIC2.52□□□□□ -2.01
Trim55G3X8Y1 Olfr561-202ENSMUST00000213432 2498 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Trim55G3X8Y1 Gm13212-202ENSMUST00000105739 3595 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Trim55G3X8Y1 Olfr1450-202ENSMUST00000213587 2872 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Trim55G3X8Y1 Gm25915-201ENSMUST00000104265 126 ntBASIC2.51□□□□□ -2.01
Trim55G3X8Y1 Gm25323-201ENSMUST00000122555 103 ntBASIC2.51□□□□□ -2.01
Trim55G3X8Y1 Gm22279-201ENSMUST00000157200 93 ntBASIC2.51□□□□□ -2.01
Trim55G3X8Y1 Gm25425-201ENSMUST00000157611 96 ntBASIC2.51□□□□□ -2.01
Trim55G3X8Y1 Trav7-6-202ENSMUST00000184687 275 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
Trim55G3X8Y1 Igkv13-78-1-201ENSMUST00000199298 200 ntBASIC2.51□□□□□ -2.01
Trim55G3X8Y1 Gm44859-201ENSMUST00000207831 94 ntBASIC2.51□□□□□ -2.01
Trim55G3X8Y1 n-R5s40-201ENSMUST00000082475 124 ntBASIC2.51□□□□□ -2.01
Trim55G3X8Y1 Gm24313-201ENSMUST00000082561 133 ntBASIC2.51□□□□□ -2.01
Trim55G3X8Y1 Olfr1450-203ENSMUST00000213925 3075 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
Trim55G3X8Y1 Olfr652-204ENSMUST00000219111 5329 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
Trim55G3X8Y1 Snhg14-213ENSMUST00000190666 3708 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
Trim55G3X8Y1 Olfr1107-202ENSMUST00000214049 4388 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
Trim55G3X8Y1 Gm25321-201ENSMUST00000122558 102 ntBASIC2.5□□□□□ -2.01
Trim55G3X8Y1 DQ267100-201ENSMUST00000122600 72 ntBASIC2.5□□□□□ -2.01
Trim55G3X8Y1 n-R5s187-201ENSMUST00000122769 111 ntBASIC2.5□□□□□ -2.01
Trim55G3X8Y1 Gm26360-201ENSMUST00000158872 103 ntBASIC2.5□□□□□ -2.01
Trim55G3X8Y1 Mir3092-201ENSMUST00000174954 96 ntBASIC2.5□□□□□ -2.01
Trim55G3X8Y1 Mir7242-201ENSMUST00000183710 79 ntBASIC2.5□□□□□ -2.01
Trim55G3X8Y1 Gm42623-201ENSMUST00000197225 379 ntBASIC2.5□□□□□ -2.01
Trim55G3X8Y1 Gm42988-201ENSMUST00000198116 225 ntBASIC2.5□□□□□ -2.01
Trim55G3X8Y1 Ptp4a1-206ENSMUST00000202889 135 ntTSL 2 BASIC2.5□□□□□ -2.01
Trim55G3X8Y1 Gm45027-201ENSMUST00000207081 78 ntTSL 3 BASIC2.5□□□□□ -2.01
Trim55G3X8Y1 Gm14327-201ENSMUST00000099001 192 ntTSL 5 BASIC2.5□□□□□ -2.01
Trim55G3X8Y1 Traj39-201ENSMUST00000103703 63 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
Trim55G3X8Y1 Gm23911-201ENSMUST00000104596 134 ntBASIC2.49□□□□□ -2.01
Trim55G3X8Y1 Mir1195-201ENSMUST00000116818 98 ntBASIC2.49□□□□□ -2.01
Trim55G3X8Y1 Ighv15-1-201ENSMUST00000194450 276 ntBASIC2.49□□□□□ -2.01
Trim55G3X8Y1 Ighv1-1-201ENSMUST00000194912 291 ntBASIC2.49□□□□□ -2.01
Trim55G3X8Y1 Gm23370-201ENSMUST00000199545 130 ntBASIC2.49□□□□□ -2.01
Trim55G3X8Y1 AC168266.1-201ENSMUST00000216024 226 ntBASIC2.49□□□□□ -2.01
Trim55G3X8Y1 AC161250.2-201ENSMUST00000215114 3107 ntBASIC2.48□□□□□ -2.01
Trim55G3X8Y1 Gm24263-201ENSMUST00000104059 107 ntBASIC2.48□□□□□ -2.01
Trim55G3X8Y1 Snord100-201ENSMUST00000116836 74 ntBASIC2.48□□□□□ -2.01
Trim55G3X8Y1 Gm26280-201ENSMUST00000157096 101 ntBASIC2.48□□□□□ -2.01
Trim55G3X8Y1 Trav14-1-201ENSMUST00000198297 399 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
Trim55G3X8Y1 Gm43587-201ENSMUST00000199590 204 ntBASIC2.48□□□□□ -2.01
Trim55G3X8Y1 Trav5-2-201ENSMUST00000199855 280 ntBASIC2.48□□□□□ -2.01
Trim55G3X8Y1 Gm44028-201ENSMUST00000205205 355 ntTSL 5 BASIC2.48□□□□□ -2.01
Trim55G3X8Y1 Gm8031-201ENSMUST00000213430 626 ntBASIC2.48□□□□□ -2.01
Trim55G3X8Y1 AC115291.1-201ENSMUST00000226803 258 ntBASIC2.48□□□□□ -2.01
Trim55G3X8Y1 n-R5s183-201ENSMUST00000083939 115 ntBASIC2.48□□□□□ -2.01
Trim55G3X8Y1 Gm22866-201ENSMUST00000083947 177 ntBASIC2.48□□□□□ -2.01
Trim55G3X8Y1 Slco6c1-201ENSMUST00000027569 2747 ntAPPRIS P2 TSL 1 (best) BASIC2.48□□□□□ -2.01
Trim55G3X8Y1 Olfr65-203ENSMUST00000214300 2855 ntAPPRIS ALT1 TSL 5 BASIC2.47□□□□□ -2.01
Trim55G3X8Y1 Gm23320-201ENSMUST00000104462 127 ntBASIC2.47□□□□□ -2.01
Trim55G3X8Y1 Gm22141-201ENSMUST00000157403 277 ntBASIC2.47□□□□□ -2.01
Trim55G3X8Y1 H3f3aos-202ENSMUST00000159740 229 ntTSL 5 BASIC2.47□□□□□ -2.01
Trim55G3X8Y1 Gm23268-201ENSMUST00000175494 78 ntBASIC2.47□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 83.5 ms