Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Gm9009-201ENSMUST00000117321 326 ntBASIC3.23□□□□□ -1.89
NpcdF8VQB8 n-R5s191-201ENSMUST00000122724 116 ntBASIC3.23□□□□□ -1.89
NpcdF8VQB8 Gm11192-201ENSMUST00000127017 151 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
NpcdF8VQB8 Gm22966-201ENSMUST00000157957 129 ntBASIC3.23□□□□□ -1.89
NpcdF8VQB8 Gm24634-201ENSMUST00000158672 107 ntBASIC3.23□□□□□ -1.89
NpcdF8VQB8 Gm23337-201ENSMUST00000158959 118 ntBASIC3.23□□□□□ -1.89
NpcdF8VQB8 Gm37807-201ENSMUST00000194310 190 ntBASIC3.23□□□□□ -1.89
NpcdF8VQB8 Gm37116-201ENSMUST00000195161 147 ntBASIC3.23□□□□□ -1.89
NpcdF8VQB8 Gm9251-201ENSMUST00000197202 628 ntBASIC3.23□□□□□ -1.89
NpcdF8VQB8 Mir186-201ENSMUST00000083497 71 ntBASIC3.23□□□□□ -1.89
NpcdF8VQB8 Slc16a7-206ENSMUST00000211781 10981 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
NpcdF8VQB8 Traj43-201ENSMUST00000103699 57 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
NpcdF8VQB8 Gm22105-201ENSMUST00000116734 116 ntBASIC3.22□□□□□ -1.89
NpcdF8VQB8 Gm26360-201ENSMUST00000158872 103 ntBASIC3.22□□□□□ -1.89
NpcdF8VQB8 Gm18546-201ENSMUST00000197245 676 ntBASIC3.22□□□□□ -1.89
NpcdF8VQB8 AC115735.1-201ENSMUST00000226633 350 ntBASIC3.22□□□□□ -1.89
NpcdF8VQB8 Gm36669-201ENSMUST00000201757 3650 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
NpcdF8VQB8 Gm25491-201ENSMUST00000158733 308 ntBASIC3.21□□□□□ -1.9
NpcdF8VQB8 Gm16111-201ENSMUST00000162128 285 ntBASIC3.21□□□□□ -1.9
NpcdF8VQB8 Gm25470-201ENSMUST00000175576 111 ntBASIC3.21□□□□□ -1.9
NpcdF8VQB8 Snord93-201ENSMUST00000175580 71 ntBASIC3.21□□□□□ -1.9
NpcdF8VQB8 Gm24304-201ENSMUST00000177635 107 ntBASIC3.21□□□□□ -1.9
NpcdF8VQB8 Gm22264-201ENSMUST00000178200 107 ntBASIC3.21□□□□□ -1.9
NpcdF8VQB8 Gm27369-201ENSMUST00000185182 71 ntBASIC3.21□□□□□ -1.9
NpcdF8VQB8 Gm44478-201ENSMUST00000204875 114 ntBASIC3.21□□□□□ -1.9
NpcdF8VQB8 Gm26458-201ENSMUST00000082832 128 ntBASIC3.21□□□□□ -1.9
NpcdF8VQB8 Muc16-204ENSMUST00000208663 25437 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
NpcdF8VQB8 AC153966.1-201ENSMUST00000220106 3764 ntBASIC3.21□□□□□ -1.9
NpcdF8VQB8 Olfr229-202ENSMUST00000214904 3125 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
NpcdF8VQB8 AC132221.1-201ENSMUST00000220577 3841 ntBASIC3.21□□□□□ -1.9
NpcdF8VQB8 Gm45652-201ENSMUST00000210926 3831 ntBASIC3.2□□□□□ -1.9
NpcdF8VQB8 Gm43706-201ENSMUST00000198767 2652 ntBASIC3.2□□□□□ -1.9
NpcdF8VQB8 Mir499-201ENSMUST00000102357 79 ntBASIC3.2□□□□□ -1.9
NpcdF8VQB8 Gm14602-201ENSMUST00000118625 340 ntBASIC3.2□□□□□ -1.9
NpcdF8VQB8 Gm25980-201ENSMUST00000157176 218 ntBASIC3.2□□□□□ -1.9
NpcdF8VQB8 Snord11-201ENSMUST00000158468 84 ntBASIC3.2□□□□□ -1.9
NpcdF8VQB8 Gm24082-201ENSMUST00000175175 83 ntBASIC3.2□□□□□ -1.9
NpcdF8VQB8 Gm24813-201ENSMUST00000175310 84 ntBASIC3.2□□□□□ -1.9
NpcdF8VQB8 Gm43587-201ENSMUST00000199590 204 ntBASIC3.2□□□□□ -1.9
NpcdF8VQB8 Olfr1421-ps1-201ENSMUST00000208900 208 ntBASIC3.2□□□□□ -1.9
NpcdF8VQB8 Gm25513-201ENSMUST00000083861 162 ntBASIC3.2□□□□□ -1.9
NpcdF8VQB8 Olfr896-ps1-202ENSMUST00000215219 2878 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
NpcdF8VQB8 Pak3-205ENSMUST00000112868 8163 ntAPPRIS P3 TSL 5 BASIC3.19□□□□□ -1.9
NpcdF8VQB8 Gm43379-201ENSMUST00000196253 7726 ntBASIC3.19□□□□□ -1.9
NpcdF8VQB8 Gm13433-201ENSMUST00000121701 240 ntBASIC3.19□□□□□ -1.9
NpcdF8VQB8 Gm24141-201ENSMUST00000122776 115 ntBASIC3.19□□□□□ -1.9
NpcdF8VQB8 Gm26105-201ENSMUST00000157253 190 ntBASIC3.19□□□□□ -1.9
NpcdF8VQB8 Gm23670-201ENSMUST00000157469 119 ntBASIC3.19□□□□□ -1.9
NpcdF8VQB8 Gm43512-201ENSMUST00000198495 176 ntBASIC3.19□□□□□ -1.9
NpcdF8VQB8 Igkv4-60-201ENSMUST00000200639 358 ntBASIC3.19□□□□□ -1.9
NpcdF8VQB8 AC125350.4-201ENSMUST00000225895 273 ntBASIC3.19□□□□□ -1.9
NpcdF8VQB8 AC165415.1-201ENSMUST00000228924 273 ntBASIC3.19□□□□□ -1.9
NpcdF8VQB8 Gm24705-201ENSMUST00000082808 107 ntBASIC3.19□□□□□ -1.9
NpcdF8VQB8 Rgs1-208ENSMUST00000189061 3841 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
NpcdF8VQB8 Olfr479-202ENSMUST00000209805 2902 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
NpcdF8VQB8 Gm22551-201ENSMUST00000157795 103 ntBASIC3.18□□□□□ -1.9
NpcdF8VQB8 Gm23665-201ENSMUST00000158054 62 ntBASIC3.18□□□□□ -1.9
NpcdF8VQB8 Gm24510-201ENSMUST00000174965 94 ntBASIC3.18□□□□□ -1.9
NpcdF8VQB8 Gm27399-201ENSMUST00000184250 78 ntBASIC3.18□□□□□ -1.9
NpcdF8VQB8 Mir3969-201ENSMUST00000197106 92 ntBASIC3.18□□□□□ -1.9
NpcdF8VQB8 Mir6925-201ENSMUST00000197857 70 ntBASIC3.18□□□□□ -1.9
NpcdF8VQB8 Gm24449-201ENSMUST00000083985 106 ntBASIC3.18□□□□□ -1.9
NpcdF8VQB8 Olfr1256-204ENSMUST00000215613 4543 ntAPPRIS P1 TSL 3 BASIC3.18□□□□□ -1.9
NpcdF8VQB8 Zbtb37-203ENSMUST00000162226 18814 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
NpcdF8VQB8 Vmn1r29-203ENSMUST00000227761 4671 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
NpcdF8VQB8 Vmn1r29-205ENSMUST00000228909 4658 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
NpcdF8VQB8 Olfr1218-203ENSMUST00000215048 3900 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
NpcdF8VQB8 Gm24670-201ENSMUST00000104154 132 ntBASIC3.17□□□□□ -1.9
NpcdF8VQB8 Gm24632-201ENSMUST00000122770 323 ntBASIC3.17□□□□□ -1.9
NpcdF8VQB8 Gm37377-201ENSMUST00000191733 304 ntBASIC3.17□□□□□ -1.9
NpcdF8VQB8 Gm44477-201ENSMUST00000199661 110 ntBASIC3.17□□□□□ -1.9
NpcdF8VQB8 Gm42807-201ENSMUST00000200141 329 ntBASIC3.17□□□□□ -1.9
NpcdF8VQB8 AC149294.9-201ENSMUST00000227256 164 ntBASIC3.17□□□□□ -1.9
NpcdF8VQB8 Mir218-1-201ENSMUST00000083669 110 ntBASIC3.17□□□□□ -1.9
NpcdF8VQB8 Gm14327-201ENSMUST00000099001 192 ntTSL 5 BASIC3.17□□□□□ -1.9
NpcdF8VQB8 Gm23772-201ENSMUST00000104433 102 ntBASIC3.16□□□□□ -1.9
NpcdF8VQB8 Gm14626-201ENSMUST00000117619 216 ntBASIC3.16□□□□□ -1.9
NpcdF8VQB8 Gm22612-201ENSMUST00000158293 101 ntBASIC3.16□□□□□ -1.9
NpcdF8VQB8 Gm22946-201ENSMUST00000158558 82 ntBASIC3.16□□□□□ -1.9
NpcdF8VQB8 Trav7-6-202ENSMUST00000184687 275 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
NpcdF8VQB8 Gm29658-201ENSMUST00000185404 230 ntBASIC3.16□□□□□ -1.9
NpcdF8VQB8 Gm37007-201ENSMUST00000194234 319 ntBASIC3.16□□□□□ -1.9
NpcdF8VQB8 Mir410-201ENSMUST00000083563 81 ntBASIC3.16□□□□□ -1.9
NpcdF8VQB8 AC125374.3-201ENSMUST00000214983 2810 ntBASIC3.15□□□□□ -1.91
NpcdF8VQB8 Igkv4-63-201ENSMUST00000103351 286 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
NpcdF8VQB8 Snord90-201ENSMUST00000104568 111 ntBASIC3.15□□□□□ -1.91
NpcdF8VQB8 Rps15a-ps6-201ENSMUST00000117476 393 ntBASIC3.15□□□□□ -1.91
NpcdF8VQB8 Gm24736-201ENSMUST00000158862 130 ntBASIC3.15□□□□□ -1.91
NpcdF8VQB8 Gm22858-201ENSMUST00000174972 76 ntBASIC3.15□□□□□ -1.91
NpcdF8VQB8 Gm29613-201ENSMUST00000185846 313 ntBASIC3.15□□□□□ -1.91
NpcdF8VQB8 Gm29544-201ENSMUST00000188860 313 ntBASIC3.15□□□□□ -1.91
NpcdF8VQB8 Gm28808-201ENSMUST00000190978 313 ntBASIC3.15□□□□□ -1.91
NpcdF8VQB8 Gm38364-201ENSMUST00000191814 179 ntBASIC3.15□□□□□ -1.91
NpcdF8VQB8 Olfr1153-202ENSMUST00000217436 2144 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
NpcdF8VQB8 Gm24232-201ENSMUST00000104314 132 ntBASIC3.14□□□□□ -1.91
NpcdF8VQB8 Gm24907-201ENSMUST00000116932 128 ntBASIC3.14□□□□□ -1.91
NpcdF8VQB8 Gm25825-201ENSMUST00000157091 124 ntBASIC3.14□□□□□ -1.91
NpcdF8VQB8 Gm23983-201ENSMUST00000157142 114 ntBASIC3.14□□□□□ -1.91
NpcdF8VQB8 Gm23043-201ENSMUST00000157890 109 ntBASIC3.14□□□□□ -1.91
NpcdF8VQB8 Gm25371-201ENSMUST00000158162 101 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 86.5 ms