Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Gm44490-201ENSMUST00000198566 127 ntBASIC1.64□□□□□ -2.15
Shank1D3YZU1 Gm45456-201ENSMUST00000210841 243 ntBASIC1.64□□□□□ -2.15
Shank1D3YZU1 AC173345.2-201ENSMUST00000222795 153 ntBASIC1.64□□□□□ -2.15
Shank1D3YZU1 AC183092.1-201ENSMUST00000224301 153 ntBASIC1.64□□□□□ -2.15
Shank1D3YZU1 Gm10217-201ENSMUST00000088080 135 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
Shank1D3YZU1 Gm38162-201ENSMUST00000195562 4597 ntBASIC1.64□□□□□ -2.15
Shank1D3YZU1 Olfr1442-203ENSMUST00000208494 3593 ntAPPRIS P1 TSL 3 BASIC1.64□□□□□ -2.15
Shank1D3YZU1 Gm25914-201ENSMUST00000157618 153 ntBASIC1.64□□□□□ -2.15
Shank1D3YZU1 Gm24750-201ENSMUST00000157843 104 ntBASIC1.64□□□□□ -2.15
Shank1D3YZU1 Gm23858-201ENSMUST00000158384 106 ntBASIC1.64□□□□□ -2.15
Shank1D3YZU1 Gm25051-201ENSMUST00000158602 249 ntBASIC1.64□□□□□ -2.15
Shank1D3YZU1 Gm24277-201ENSMUST00000158661 104 ntBASIC1.64□□□□□ -2.15
Shank1D3YZU1 Mir8119-201ENSMUST00000183371 129 ntBASIC1.64□□□□□ -2.15
Shank1D3YZU1 Mir6388-201ENSMUST00000184417 75 ntBASIC1.64□□□□□ -2.15
Shank1D3YZU1 Gm45002-201ENSMUST00000208045 120 ntBASIC1.64□□□□□ -2.15
Shank1D3YZU1 Tlr8-202ENSMUST00000112170 3431 ntAPPRIS P1 TSL 2 BASIC1.63□□□□□ -2.15
Shank1D3YZU1 Olfr394-202ENSMUST00000214284 5562 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
Shank1D3YZU1 Zfp981-203ENSMUST00000179175 2953 ntAPPRIS P1 TSL 2 BASIC1.63□□□□□ -2.15
Shank1D3YZU1 Mir466h-201ENSMUST00000104748 81 ntBASIC1.63□□□□□ -2.15
Shank1D3YZU1 Gm22482-201ENSMUST00000122563 359 ntBASIC1.63□□□□□ -2.15
Shank1D3YZU1 Gm22083-201ENSMUST00000157586 102 ntBASIC1.63□□□□□ -2.15
Shank1D3YZU1 Gm25834-201ENSMUST00000158916 101 ntBASIC1.63□□□□□ -2.15
Shank1D3YZU1 Gm24656-201ENSMUST00000177548 132 ntBASIC1.63□□□□□ -2.15
Shank1D3YZU1 Gm29308-201ENSMUST00000188863 315 ntBASIC1.63□□□□□ -2.15
Shank1D3YZU1 Gm28169-201ENSMUST00000190342 345 ntBASIC1.63□□□□□ -2.15
Shank1D3YZU1 Gm26225-201ENSMUST00000082508 135 ntBASIC1.63□□□□□ -2.15
Shank1D3YZU1 Olfr1218-203ENSMUST00000215048 3900 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
Shank1D3YZU1 Mir301b-201ENSMUST00000102333 97 ntBASIC1.62□□□□□ -2.15
Shank1D3YZU1 Gm15214-201ENSMUST00000122155 470 ntBASIC1.62□□□□□ -2.15
Shank1D3YZU1 Gm2830-201ENSMUST00000140330 385 ntBASIC1.62□□□□□ -2.15
Shank1D3YZU1 Gm26157-201ENSMUST00000158974 126 ntBASIC1.62□□□□□ -2.15
Shank1D3YZU1 Olfr1366-201ENSMUST00000168629 1054 ntAPPRIS ALT2 BASIC1.62□□□□□ -2.15
Shank1D3YZU1 Gm24390-201ENSMUST00000179578 62 ntBASIC1.62□□□□□ -2.15
Shank1D3YZU1 Olfr1366-204ENSMUST00000218154 1054 ntAPPRIS P2 BASIC1.62□□□□□ -2.15
Shank1D3YZU1 Gm22686-201ENSMUST00000082847 100 ntBASIC1.62□□□□□ -2.15
Shank1D3YZU1 Gm22169-201ENSMUST00000083229 107 ntBASIC1.62□□□□□ -2.15
Shank1D3YZU1 Mir384-201ENSMUST00000083565 88 ntBASIC1.62□□□□□ -2.15
Shank1D3YZU1 Zfp980-202ENSMUST00000180014 1938 ntAPPRIS P1 TSL 2 BASIC1.62□□□□□ -2.15
Shank1D3YZU1 Gm22051-201ENSMUST00000117002 127 ntBASIC1.62□□□□□ -2.15
Shank1D3YZU1 Gm14882-201ENSMUST00000117216 218 ntBASIC1.62□□□□□ -2.15
Shank1D3YZU1 Gm12325-201ENSMUST00000135553 320 ntTSL 5 BASIC1.62□□□□□ -2.15
Shank1D3YZU1 Gm23194-201ENSMUST00000158813 105 ntBASIC1.62□□□□□ -2.15
Shank1D3YZU1 Gm27585-201ENSMUST00000183717 199 ntBASIC1.62□□□□□ -2.15
Shank1D3YZU1 Gm29604-201ENSMUST00000187176 163 ntBASIC1.62□□□□□ -2.15
Shank1D3YZU1 Gm9156-201ENSMUST00000189660 463 ntBASIC1.62□□□□□ -2.15
Shank1D3YZU1 Gm34139-201ENSMUST00000196166 294 ntBASIC1.62□□□□□ -2.15
Shank1D3YZU1 Gm3333-201ENSMUST00000221637 452 ntTSL 5 BASIC1.62□□□□□ -2.15
Shank1D3YZU1 Gm34276-201ENSMUST00000222558 439 ntTSL 5 BASIC1.62□□□□□ -2.15
Shank1D3YZU1 AC122242.1-201ENSMUST00000224650 304 ntBASIC1.62□□□□□ -2.15
Shank1D3YZU1 Knl1-202ENSMUST00000028802 7800 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
Shank1D3YZU1 Olfr790-202ENSMUST00000203966 2602 ntAPPRIS P1 TSL 5 BASIC1.61□□□□□ -2.15
Shank1D3YZU1 Gm22673-201ENSMUST00000104415 131 ntBASIC1.61□□□□□ -2.15
Shank1D3YZU1 Gm23101-201ENSMUST00000157550 137 ntBASIC1.61□□□□□ -2.15
Shank1D3YZU1 Gm23584-201ENSMUST00000157655 129 ntBASIC1.61□□□□□ -2.15
Shank1D3YZU1 Gm22553-201ENSMUST00000157797 295 ntBASIC1.61□□□□□ -2.15
Shank1D3YZU1 Mir1927-201ENSMUST00000158579 109 ntBASIC1.61□□□□□ -2.15
Shank1D3YZU1 Gm27928-201ENSMUST00000183747 256 ntBASIC1.61□□□□□ -2.15
Shank1D3YZU1 Mir7016-201ENSMUST00000184308 72 ntBASIC1.61□□□□□ -2.15
Shank1D3YZU1 Gm40331-201ENSMUST00000198430 217 ntTSL 3 BASIC1.61□□□□□ -2.15
Shank1D3YZU1 Gm45791-201ENSMUST00000212908 352 ntBASIC1.61□□□□□ -2.15
Shank1D3YZU1 AC144671.1-201ENSMUST00000215265 99 ntBASIC1.61□□□□□ -2.15
Shank1D3YZU1 Gm24453-201ENSMUST00000083346 76 ntBASIC1.61□□□□□ -2.15
Shank1D3YZU1 Mir148b-201ENSMUST00000083626 97 ntBASIC1.61□□□□□ -2.15
Shank1D3YZU1 Olfr868-202ENSMUST00000212999 4233 ntAPPRIS P1 TSL 3 BASIC1.61□□□□□ -2.15
Shank1D3YZU1 Gm12080-201ENSMUST00000119821 1883 ntBASIC1.61□□□□□ -2.15
Shank1D3YZU1 n-R5s158-201ENSMUST00000104095 118 ntBASIC1.61□□□□□ -2.15
Shank1D3YZU1 Gm10959-201ENSMUST00000106431 72 ntAPPRIS P1 TSL 5 BASIC1.61□□□□□ -2.15
Shank1D3YZU1 n-R5s189-201ENSMUST00000122675 114 ntBASIC1.61□□□□□ -2.15
Shank1D3YZU1 Gm20438-201ENSMUST00000174441 329 ntBASIC1.61□□□□□ -2.15
Shank1D3YZU1 Snora69-201ENSMUST00000083708 131 ntBASIC1.61□□□□□ -2.15
Shank1D3YZU1 Olfr790-203ENSMUST00000215067 2659 ntAPPRIS P1 TSL 5 BASIC1.6□□□□□ -2.15
Shank1D3YZU1 Igkv6-13-201ENSMUST00000103395 287 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
Shank1D3YZU1 Zfp969-202ENSMUST00000131041 252 ntTSL 2 BASIC1.6□□□□□ -2.15
Shank1D3YZU1 Gm22586-201ENSMUST00000157507 122 ntBASIC1.6□□□□□ -2.15
Shank1D3YZU1 Gm22510-201ENSMUST00000179304 79 ntBASIC1.6□□□□□ -2.15
Shank1D3YZU1 Gm26336-201ENSMUST00000179449 79 ntBASIC1.6□□□□□ -2.15
Shank1D3YZU1 Gm26390-201ENSMUST00000179628 79 ntBASIC1.6□□□□□ -2.15
Shank1D3YZU1 Vmn2r-ps20-201ENSMUST00000179853 382 ntBASIC1.6□□□□□ -2.15
Shank1D3YZU1 Gm27894-201ENSMUST00000184177 92 ntBASIC1.6□□□□□ -2.15
Shank1D3YZU1 AC117232.1-201ENSMUST00000197964 119 ntBASIC1.6□□□□□ -2.15
Shank1D3YZU1 Snord43-201ENSMUST00000199549 108 ntBASIC1.6□□□□□ -2.15
Shank1D3YZU1 Gm11351-202ENSMUST00000225724 478 ntBASIC1.6□□□□□ -2.15
Shank1D3YZU1 Gm10139-201ENSMUST00000081471 171 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
Shank1D3YZU1 Olfr921-203ENSMUST00000217114 4120 ntAPPRIS P1 TSL 2 BASIC1.6□□□□□ -2.15
Shank1D3YZU1 Olfr948-202ENSMUST00000216132 4164 ntAPPRIS P1 TSL 5 BASIC1.6□□□□□ -2.15
Shank1D3YZU1 Gm18188-201ENSMUST00000219386 478 ntBASIC1.59□□□□□ -2.15
Shank1D3YZU1 CU062626.2-201ENSMUST00000223953 274 ntBASIC1.59□□□□□ -2.15
Shank1D3YZU1 Gm10719-202ENSMUST00000099049 675 ntAPPRIS ALT2 TSL 5 BASIC1.59□□□□□ -2.15
Shank1D3YZU1 Olfr1044-202ENSMUST00000215171 3266 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.15
Shank1D3YZU1 Olfr1218-202ENSMUST00000213609 3760 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.15
Shank1D3YZU1 Gm14588-201ENSMUST00000119895 172 ntBASIC1.59□□□□□ -2.16
Shank1D3YZU1 Gm15611-201ENSMUST00000146928 406 ntTSL 1 (best) BASIC1.59□□□□□ -2.16
Shank1D3YZU1 Gm25267-201ENSMUST00000158522 63 ntBASIC1.59□□□□□ -2.16
Shank1D3YZU1 Gm26022-201ENSMUST00000158663 108 ntBASIC1.59□□□□□ -2.16
Shank1D3YZU1 Gm27699-201ENSMUST00000183553 180 ntBASIC1.59□□□□□ -2.16
Shank1D3YZU1 Mir7665-201ENSMUST00000184907 63 ntBASIC1.59□□□□□ -2.16
Shank1D3YZU1 Gm28434-201ENSMUST00000187738 500 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.16
Shank1D3YZU1 Gm28992-201ENSMUST00000190534 139 ntBASIC1.59□□□□□ -2.16
Shank1D3YZU1 Gpr174-204ENSMUST00000120971 3588 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
Shank1D3YZU1 Vmn1r185-210ENSMUST00000228367 6982 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
Retrieved 100 of 76,532 protein–RNA pairs in 87 ms